Enzyme engineering: Reshaping the biocatalytic functions.

Abstract:

:Enzyme engineering is a powerful tool to fine-tune the enzymes. It is a technique by which the stability, activity, and specificity of the enzymes can be altered. The characteristic properties of an enzyme can be amended by immobilization and protein engineering. Among them, protein engineering is the most promising, as in addition to amending the stability and activity, it is the only way to modulate the specificity and stereoselectivity of enzymes. The current review sheds light on protein engineering and the approaches applied for it on the basis of the degree of knowledge of structure and function of enzymes. Enzymes, which have been engineered are also discussed in detail and categorized on the basis of their respective applications. This will give a better insight into the revolutionary changes brought by protein engineering of enzymes in various industrial and environmental processes.

journal_name

Biotechnol Bioeng

authors

Ali M,Ishqi HM,Husain Q

doi

10.1002/bit.27329

subject

Has Abstract

pub_date

2020-06-01 00:00:00

pages

1877-1894

issue

6

eissn

0006-3592

issn

1097-0290

journal_volume

117

pub_type

杂志文章,评审
  • Understanding mild acid pretreatment of sugarcane bagasse through particle scale modeling.

    abstract::Sugarcane bagasse is an abundant and sustainable resource, generated as a by-product of sugarcane milling. The cellulosic material within bagasse can be broken down into glucose molecules and fermented to produce ethanol, making it a promising feedstock for biofuel production. Mild acid pretreatment hydrolyses the hem...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.24984

    authors: Greenwood AA,Farrell TW,O'Hara IM

    更新日期:2013-12-01 00:00:00

  • Plasmid presence changes the relative levels of many host cell proteins and ribosome components in recombinant Escherichia coli.

    abstract::Relative levels of many individual proteins in Escherichia coli HB101 strains with 0, 37, 56, and 240 plasmids per chromosome were determined by computer image analysis of two-dimensional gel electrophoresis patterns. The plasmids investigated had very similar sequences except for small domains encoding the repressor ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260370808

    authors: Birnbaum S,Bailey JE

    更新日期:1991-04-05 00:00:00

  • Intramolecular esterification by lipase powder in microaqueous benzene: effect of moisture content.

    abstract::In view of the biochemical reaction catalyzed by enzyme powder suspended in a water-insoluble organic solvent, an equation was derived to estimate the amount of water bound to the enzyme powder. With this equation, an apparent adsorption isotherm between free water (water freely dissolved in benzene) and bound water (...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260340613

    authors: Yamane T,Kojima Y,Ichiryu T,Nagata M,Shimizu S

    更新日期:1989-09-01 00:00:00

  • Model-based analysis of the role of biological, hydrological and geochemical factors affecting uranium bioremediation.

    abstract::Uranium contamination is a serious concern at several sites motivating the development of novel treatment strategies such as the Geobacter-mediated reductive immobilization of uranium. However, this bioremediation strategy has not yet been optimized for the sustained uranium removal. While several reactive-transport m...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.23096

    authors: Zhao J,Scheibe TD,Mahadevan R

    更新日期:2011-07-01 00:00:00

  • Application of dynamic metabolic flux analysis for process modeling: Robust flux estimation with regularization, confidence bounds, and selection of elementary modes.

    abstract::In macroscopic dynamic models of fermentation processes, elementary modes (EM) derived from metabolic networks are often used to describe the reaction stoichiometry in a simplified manner and to build predictive models by parameterizing kinetic rate equations for the EM. In this procedure, the selection of a set of EM...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.27340

    authors: Hebing L,Neymann T,Engell S

    更新日期:2020-07-01 00:00:00

  • Ethanol fermentation in a continuous tower fermentor.

    abstract::A mutant of Saccharomyces cerevisiae, which forms large, multicellular flocs in liquid culture, rapidly fermented media containing high concentrations of glucose (100-180 g/L) in a continuous nonaerated tower fermentor at 30 degrees C. The fermentor operated continuously for seven months. Batch and tower fermentor dat...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260260717

    authors: Jones ST,Korus RA,Admassu W,Heimsch RC

    更新日期:1984-07-01 00:00:00

  • Production of S-adenosyl-L-methionine by Saccharomyces cerevisiae cells carrying a gene for ethionine resistance.

    abstract::A gene for ethionine resistance isolated from the yeast Saccharomyces cerevisiae DKD-5D-H conferred on the yeast cells resistance to seleno-L-methionine and capability to produce S-adenosyl-L-methionine in the cells. An enzymatic study of the L-methionine synthetic pathway of L-methionine proto- and auxotrophs and in ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260351107

    authors: Shiomi N,Fukuda H,Fukuda Y,Murata K,Kimura A

    更新日期:1990-05-01 00:00:00

  • The kinetics of protein precipitation by different reagents.

    abstract::The kinetics of precipitation of soya protein has been examined in a tubular flow reactor with the precipitants, ammonium sulfate, ethanol, divalent calcium, and sulfuric acid. The precipitate growth profiles obtained in all cases showed the rapid formation of a precipitate phase and the attainment of a final size wit...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260280312

    authors: Chan MY,Hoare M,Dunnill P

    更新日期:1986-03-01 00:00:00

  • Process parameter shifting: Part I. Effect of DOT, pH, and temperature on the performance of Epo-Fc expressing CHO cells cultivated in controlled batch bioreactors.

    abstract::The impact of process environment changes on process performance is one of the most crucial process safety issues when cultivating mammalian cells in a bioreactor. In contrast, directed shifting of process parameters can also be used as an optimization tool providing higher cell and product yields. Compared to other s...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21013

    authors: Trummer E,Fauland K,Seidinger S,Schriebl K,Lattenmayer C,Kunert R,Vorauer-Uhl K,Weik R,Borth N,Katinger H,Müller D

    更新日期:2006-08-20 00:00:00

  • Fed-batch culture of Bacillus thuringiensis for thuringiensin production in a tower type bioreactor.

    abstract::Fed-batch culture of Bacillus thuringiensis in a modified airlift reactor has been developed by using adaptive control of glucose concentration in the reactor. The glucose concentration was estimated via a correlation equation between carbon dioxide production rate and glucose consumption rate. The estimated glucose c...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260480307

    authors: Jong JZ,Hsiun DY,Wu WT,Tzeng YM

    更新日期:1995-11-05 00:00:00

  • Natural antimicrobial agent (reuterin) produced by lactobacillus reuteri for sanitization of biological tissues inoculated with pseudomonas aeruginosa.

    abstract::The study was done to evaluate the efficacy of using reuterin produced by Lactobacillus reuteri to sanitize biological tissues. The microorganism tested in the study was Pseudomonas aeruginosa, a common cause of nosocomial biomaterial-related infections. The inhibitory effect of reuterin on P. aeruginosa for an inocul...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.10764

    authors: Liang HF,Chen CN,Chang Y,Sung HW

    更新日期:2003-10-20 00:00:00

  • Determination of the cytosolic free NAD/NADH ratio in Saccharomyces cerevisiae under steady-state and highly dynamic conditions.

    abstract::The coenzyme NAD plays a major role in metabolism as a key redox carrier and signaling molecule but current measurement techniques cannot distinguish between different compartment pools, between free and protein-bound forms and/or between NAD(H) and NADP(H). Local free NAD/NADH ratios can be determined from product/su...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21813

    authors: Canelas AB,van Gulik WM,Heijnen JJ

    更新日期:2008-07-01 00:00:00

  • Importance of spore mutants for fed-batch and continuous fermentation of Bacillus subtilis.

    abstract::To alleviate plasmid instability and to prolong the production phase of subtilisin, integrable plasmid and spore mutants are used. Compared with batch-type shake flask cultures, spore mutants' ability to produce subtilisin can be well pronounced in fed-batch and continuous cultures. Hence, the two culture methods make...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260470610

    authors: Oh MK,Kim BG,Park SH

    更新日期:1995-09-20 00:00:00

  • The acetone butanol fermentation on glucose and xylose. I. Regulation and kinetics in batch cultures.

    abstract::The kinetics in batch culture of the acetone butanol fermentation by Clostridium acetobutylicum is compared on glucose, xylose, and mixtures of both sugars. The fastest initial growth and transition from an acid to a solvent metabolism occurs on glucose, with a final 62 g/L glucose conversion. On xylose, an initial sl...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260280203

    authors: Fond O,Engasser JM,Matta-El-Amouri G,Petitdemange H

    更新日期:1986-02-01 00:00:00

  • Potential application of monolith packed columns as bioreactors, control of biofilm formation.

    abstract::Monolith reactors combine good mass transfer characteristics with low-pressure drop, the principle factors affecting the cost effectiveness of industrial processes. Recently, these specific features of the monolith reactors have drawn the attention toward the application of the monolith reactor in multiphase reaction ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.20674

    authors: Ebrahimi S,Kleerebezem R,Kreutzer MT,Kapteijn F,Moulijn JA,Heijnen JJ,van Loosdrecht MC

    更新日期:2006-02-05 00:00:00

  • Development of a multienzyme reactor for dopamine synthesis: I. enzymology and kinetics.

    abstract::The enzymology and kinetics of tyrosine phenol lyase (TPL) from Erwinia herbicola, and tyrosine decarboxylase (TDC) from Streptococcus faecalis have been investigated for potential use in a coimmobilized multienzyme biocatalytic system for the production of dopamine. In this multienzyme biotransformation using whole c...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260390711

    authors: Anderson WA,Moo-Young M,Legge RL

    更新日期:1992-03-25 00:00:00

  • Biosynthesis and characterization of 3-hydroxyalkanoate terpolyesters with adjustable properties by Aeromonas hydrophila.

    abstract::Polyhydroxyalkanoates (PHA) terployesters P(3HB-co-3HV-co-3HHx) consisting of 3-hydroxybutyrate (3HB), 3-hydroxyvalerate (3HV), and 3-hydroxyhexanoate (3HHx) were produced by wild-type Aeromonas hydrophila 4AK4, its recombinant harboring PHA synthesis genes phaPCJ encoding PHA binding protein phasin, PHA synthase, and...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.22409

    authors: Zhang HF,Ma L,Wang ZH,Chen GQ

    更新日期:2009-10-15 00:00:00

  • Expression of recombinant protein A from the lac promoter in Escherichia coli JM83 is not subject to catabolite repression when grown under specific conditions of continuous culture.

    abstract::Although widely used in experimental and industrial situations, genetically engineered plasmids containing the lac promoter from Escherichia coli are subject to catabolite repression when grown in glucose-containing media. Several methods of overcoming this problem have been investigated by studying the expression of ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260380914

    authors: Warnes A,Stephenson JR,Fooks AR,Melling J,Brown MR

    更新日期:1991-11-01 00:00:00

  • Ammonium ion and glucosamine dependent increases of oligosaccharide complexity in recombinant glycoproteins secreted from cultivated BHK-21 cells.

    abstract::The effect of different ammonium concentrations and glucosamine on baby hamster kidney (BHK)-21 cell cultures grown in continuously perfused double membrane bioreactors was investigated with respect to the final carbohydrate structures of a secretory recombinant glycoprotein. The human interleukin-2 (IL-2) mutant glyc...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:

    authors: Gawlitzek M,Valley U,Wagner R

    更新日期:1998-03-05 00:00:00

  • Albumin recovery with centrifugal adsorption technology (CAT).

    abstract::Centrifugal adsorption technology (CAT) is a new compact, countercurrent technology for efficient adsorption from large liquid streams by using adsorbent particles in the micrometer range. CAT seems particularly suited for the recovery of macromolecules at low concentrations, because the small particle dimensions lead...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.10121

    authors: Peet DJ,Bisschops MA,van Hateren SH,van der Wielen LA

    更新日期:2002-05-05 00:00:00

  • Sulfide oxidation at halo-alkaline conditions in a fed-batch bioreactor.

    abstract::A biotechnological process is described to remove hydrogen sulfide (H(2)S) from high-pressure natural gas and sour gases produced in the petrochemical industry. The process operates at halo-alkaline conditions and combines an aerobic sulfide-oxidizing reactor with an anaerobic sulfate (SO(4) (2-)) and thiosulfate (S(2...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.21326

    authors: van den Bosch PL,van Beusekom OC,Buisman CJ,Janssen AJ

    更新日期:2007-08-01 00:00:00

  • Comment on mathematical models which describe transcription and calculate the relationship between mRNA and protein expression ratio.

    abstract::Mathematical models to describe transcription (Arnold et al. (2001); Biotech Bioeng 72:548-561) and translation (Mehra et al. (2003); Biotech Bioeng 84:822-841) in bacteria are modified in order to improve reaction kinetics and to include the number of polymerase molecules that are active on the DNA, as well as to inc...

    journal_title:Biotechnology and bioengineering

    pub_type: 评论,信件

    doi:10.1002/bit.21065

    authors: Kremling A

    更新日期:2007-03-01 00:00:00

  • Investigation of the porous structure of cellulosic substrates through confocal laser scanning microscopy.

    abstract::At the most fundamental level, saccharification occurs when cell wall degrading enzymes (CWDEs) diffuse, bind to and react on readily accessible cellulose fibrils. Thus, the study of the diffusive behavior of solutes into and out of cellulosic substrates is important for understanding how biomass pore size distributio...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.24958

    authors: Yang D,Moran-Mirabal JM,Parlange JY,Walker LP

    更新日期:2013-11-01 00:00:00

  • Improved performance with multiple fermentors for repeated batch cultivation for non-growth-associated products.

    abstract::Based on batch cultivation data for the production of L-glutamic acid from glucose, a comparative evaluation was made for repeated batch cultivations using one and more fermentors. The problem was formulated as maximizing the productivity of metabolic product with the specified conversion with respect to the cell age ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260270524

    authors: Shimizu K,Kobayashi T,Nagara A,Matsubara M

    更新日期:1985-05-01 00:00:00

  • Bioaffinity purification of NADP(+)-dependent dehydrogenases: studies with alcohol dehydrogenase from Thermoanaerobacter brockii.

    abstract::This study describes the development and application of a bioaffinity chromatographic system for the one-step purification of an NADP(+)-dependent secondary alcohol dehydrogenase from the obligate anaerobe, Thermoanaerobacter brockii (TBADH, EC 1.1.1.2). The general approach is based upon improving the selectivity of ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.10079

    authors: McMahon M,Mulcahy P

    更新日期:2002-03-05 00:00:00

  • An immobilized enzyme reactor for the detoxification of bilirubin.

    abstract::An immobilized enzyme reactor has been developed for the degradation of bilirubin as a potential treatment for neonatal jaundice. It utilizes the enzyme bilirubin oxidase from Myrothecium verrucaria, which in the presence of molecular oxygen converts bilirubin to biliverdin and other products that are much less toxic ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260281011

    authors: Sung C,Lavin A,Klibanov AM,Langer R

    更新日期:1986-10-01 00:00:00

  • A kinetic model for methanogenesis from whey permeate in a packed bed immobilized cell bioreactor.

    abstract::The fermentation kinetics of methane production from whey permeate in a packed bed immobilized cell bioreactor at mesophilic temperatures and pHs around neutral was studied. Propionate and acetate were the only two major organic intermediates found in the methanogenic fermentation of lactose. Based on this finding, a ...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.260370412

    authors: Yang ST,Quo M

    更新日期:1991-02-20 00:00:00

  • Non-invasive self-referencing electrochemical sensors for quantifying real-time biofilm analyte flux.

    abstract::Current techniques for characterizing biofilm physiology lack the signal filtering capability required for quantifying signals associated with real time biologically active transport. Though a great deal was learned from previous investigations, no results have been reported on the characterization of in vivo, real ti...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.22128

    authors: McLamore ES,Porterfield DM,Banks MK

    更新日期:2009-02-15 00:00:00

  • Photodegradation as a mechanism for controlled drug delivery.

    abstract::A drug-releasing model compound based on photosensitive acrylated ortho-nitrobenzylether (o-NBE) moiety and fluorescein was synthesized to demonstrate photolysis as a mechanism for drug release. Release of this model compound from a hydrogel network can be controlled with light intensity (5-20 mW/cm(2)), exposure dura...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.22882

    authors: Griffin DR,Patterson JT,Kasko AM

    更新日期:2010-12-15 00:00:00

  • Biocatalysis of isomerization of 1,2-benzisoxazole by bovine serum albumin in an organic solvent.

    abstract::The catalytic properties of bovine serum albumin (BSA) have been studied rather extensively. The protein has shown catalytic activities toward a variety of reactions in aqueous media. However, there appears to be no reports of reactions catalyzed exclusively in organic media. In this study, we report the catalytic pro...

    journal_title:Biotechnology and bioengineering

    pub_type: 杂志文章

    doi:10.1002/bit.1144

    authors: Liu XC,Lemma-Gray P

    更新日期:2001-09-20 00:00:00