Identification of human rotavirus serotype by hybridization to polymerase chain reaction-generated probes derived from a hyperdivergent region of the gene encoding outer capsid protein VP7.

Abstract:

:We have synthesized 32P-labeled hybridization probes from a hyperdivergent region (nucleotides 51 to 392) of the rotavirus gene encoding the VP7 glycoprotein by using the polymerase chain reaction method. Both RNA (after an initial reverse transcription step) and cloned cDNA from human rotavirus serotypes 1 through 4 could be used as templates to amplify this region. High-stringency hybridization of each of the four probes to rotavirus RNAs dotted on nylon membranes allowed the specific detection of corresponding sequences and thus permitted identification of the serotype of the strains dotted. The procedure was useful when applied to rotaviruses isolated from field studies.

journal_name

J Virol

journal_title

Journal of virology

authors

Flores J,Sears J,Schael IP,White L,Garcia D,Lanata C,Kapikian AZ

doi

10.1128/JVI.64.8.4021-4024.1990

subject

Has Abstract

pub_date

1990-08-01 00:00:00

pages

4021-4

issue

8

eissn

0022-538X

issn

1098-5514

journal_volume

64

pub_type

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