Latent HIV-1 infection occurs in multiple subsets of hematopoietic progenitor cells and is reversed by NF-κB activation.

Abstract:

:The ability of HIV-1 to establish a latent infection presents a barrier to curing HIV. The best-studied reservoir of latent virus in vivo is resting memory CD4(+) T cells, but it has recently been shown that CD34(+) hematopoietic progenitor cells (HPCs) can also become latently infected by HIV-1 in vitro and in vivo. CD34(+) cells are not homogenous, however, and it is not yet known which types of CD34(+) cells support a latent infection. Furthermore, the mechanisms through which latency is established in this cell type are not yet known. Here we report the development of a primary cell model for latent HIV-1 infection in HPCs. We demonstrate that in this model, latent infection can be established in all subsets of HPCs examined, including HPCs with cell surface markers consistent with immature hematopoietic stem and progenitor cells. We further show that the establishment of latent infection in these cells can be reversed by tumor necrosis factor alpha (TNF-α) through an NF-κB-dependent mechanism. In contrast, we do not find evidence for a role of positive transcription elongation factor b (P-TEFb) in the establishment of latent infection in HPCs. Finally, we demonstrate that prostratin and suberoylanilide hydroxamic acid (SAHA), but not hexamethylene bisacetamide (HMBA) or 5-aza-2'-deoxycytidine (Aza-CdR), reactivate latent HIV-1 in HPCs. These findings illuminate the mechanisms through which latent infection can be established in HPCs and suggest common pathways through which latent virus could be reactivated in both HPCs and resting memory T cells to eliminate latent reservoirs of HIV-1.

journal_name

J Virol

journal_title

Journal of virology

authors

McNamara LA,Ganesh JA,Collins KL

doi

10.1128/JVI.00895-12

subject

Has Abstract

pub_date

2012-09-01 00:00:00

pages

9337-50

issue

17

eissn

0022-538X

issn

1098-5514

pii

JVI.00895-12

journal_volume

86

pub_type

杂志文章
  • Morphf mutants of Rous sarcoma virus: nucleotide sequencing analysis suggests that a class of morphf mutants was generated through splicing of a cryptic intron.

    abstract::The nature of the lesions involved in producing the fusiform phenotype of three mutants (WO101, WO201, and tsST529) of the Schmidt-Ruppin A strain of Rous sarcoma virus (RSV) was determined by molecular cloning and DNA sequencing. WO101 and WO201 contained an in-frame deletion of the v-src region coding for amino acid...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.61.6.1893-1900.1987

    authors: Anderson SK,Fujita DJ

    更新日期:1987-06-01 00:00:00

  • Structural stability of influenza A(H1N1)pdm09 virus hemagglutinins.

    abstract:UNLABELLED:The noncovalent interactions that mediate trimerization of the influenza hemagglutinin (HA) are important determinants of its biological activities. Recent studies have demonstrated that mutations in the HA trimer interface affect the thermal and pH sensitivities of HA, suggesting a possible impact on vaccin...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02278-13

    authors: Yang H,Chang JC,Guo Z,Carney PJ,Shore DA,Donis RO,Cox NJ,Villanueva JM,Klimov AI,Stevens J

    更新日期:2014-05-01 00:00:00

  • Shared ancestry between a newfound mole-borne hantavirus and hantaviruses harbored by cricetid rodents.

    abstract::Discovery of genetically distinct hantaviruses in multiple species of shrews (order Soricomorpha, family Soricidae) and moles (family Talpidae) contests the conventional view that rodents (order Rodentia, families Muridae and Cricetidae) are the principal reservoir hosts and suggests that the evolutionary history of h...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02450-10

    authors: Kang HJ,Bennett SN,Hope AG,Cook JA,Yanagihara R

    更新日期:2011-08-01 00:00:00

  • Functional identification and analysis of cis-acting sequences which mediate genome cleavage and packaging in human herpesvirus 6.

    abstract::Sequences present at the genomic termini of herpesviruses become linked during lytic-phase replication and provide the substrate for cleavage and packaging of unit length viral genomes. We have previously shown that homologs of the consensus herpesvirus cleavage-packaging signals, pac1 and pac2, are located at the lef...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.72.1.320-329.1998

    authors: Deng H,Dewhurst S

    更新日期:1998-01-01 00:00:00

  • Chemokine coreceptor usage by diverse primary isolates of human immunodeficiency virus type 1.

    abstract::We tested chemokine receptor subset usage by diverse, well-characterized primary viruses isolated from peripheral blood by monitoring viral replication with CCR1, CCR2b, CCR3, CCR5, and CXCR4 U87MG.CD4 transformed cell lines and STRL33/BONZO/TYMSTR and GPR15/BOB HOS.CD4 transformed cell lines. Primary viruses were iso...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.72.11.9307-9312.1998

    authors: Zhang L,He T,Huang Y,Chen Z,Guo Y,Wu S,Kunstman KJ,Brown RC,Phair JP,Neumann AU,Ho DD,Wolinsky SM

    更新日期:1998-11-01 00:00:00

  • Identification of an FMR cell surface antigen associated with murine leukemia virus-infected cells.

    abstract::FMR antigens are found on the surface of cells infected with Friend, Moloney, and Rauscher murine leukemia viruses (MuLV). These antigens are serologically distinct from the G cell surface antigens that are found on cells infected with endogenous MuLV (AKR and Gross virus). Cell surface antigens of both virus groups a...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.26.3.805-812.1978

    authors: Nowinski RC,Emery S,Ledbetter J

    更新日期:1978-06-01 00:00:00

  • Genetic characterization of the vaccinia virus DNA polymerase: cytosine arabinoside resistance requires a variable lesion conferring phosphonoacetate resistance in conjunction with an invariant mutation localized to the 3'-5' exonuclease domain.

    abstract::In this report, we describe the isolation, molecular genetic mapping, and phenotypic characterization of vaccinia virus mutants resistant to cytosine arabinoside (araC) and phosphonoacetic acid (PAA). At 37 degrees C, 8 microM araC was found to prevent macroscopic plaque formation by wild-type virus and to cause a 10(...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.67.7.4323-4336.1993

    authors: Taddie JA,Traktman P

    更新日期:1993-07-01 00:00:00

  • Possible in vitro repair of viral RNA by ligase-like enzyme(s) in poliovirus-infected cells.

    abstract::A soluble polymerase-template complex prepared from poliovirus-infected cells was found to incorporate radioactive UTP into trichloroacetic acid-insoluble RNA linearly for 8 h in the presence of ATP and Mg2+. Radioactive CTP or GTP was not incorporated under identical conditions. Nearest-neighbor analysis of the in vi...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.21.1.61-68.1977

    authors: Yin FH

    更新日期:1977-01-01 00:00:00

  • Effect of Zn 2+ on the adsorption of male-specific filamentous deoxyribonucleic acid and isometric ribonucleic acid bacteriophages.

    abstract::By means of both electron microscopy and plaque assay techniques, 10(-3)m Zn(2+) has been shown to reduce the adsorption rate of male-specific filamentous deoxyribonucleic acid bacteriophages to the tips of F pili. In contrast, 10(-3)m Zn(2+) did not affect the adsorption of male-specific ribonucleic acid phages to th...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.10.4.869-871.1972

    authors: Ou JT,Anderson TF

    更新日期:1972-10-01 00:00:00

  • Epstein-Barr virus (EBV)-containing nasopharyngeal carcinoma cells express the B-cell activation antigen blast2/CD23 and low levels of the EBV receptor CR2.

    abstract::Anaplastic nasopharyngeal carcinoma (NPC) cells invariably harbor the Epstein-Barr virus (EBV) genome, an association that is unique among human virus-associated cancers. Although EBV is able to replicate in epithelial cells, results with expression of the EBV receptor (complement receptor type 2 [CR2]; also called CD...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.63.10.4121-4128.1989

    authors: Billaud M,Busson P,Huang D,Mueller-Lantzch N,Rousselet G,Pavlish O,Wakasugi H,Seigneurin JM,Tursz T,Lenoir GM

    更新日期:1989-10-01 00:00:00

  • Genome-scale phylogenetic analyses of chikungunya virus reveal independent emergences of recent epidemics and various evolutionary rates.

    abstract::Chikungunya virus (CHIKV), a mosquito-borne alphavirus, has traditionally circulated in Africa and Asia, causing human febrile illness accompanied by severe, chronic joint pain. In Africa, epidemic emergence of CHIKV involves the transition from an enzootic, sylvatic cycle involving arboreal mosquito vectors and nonhu...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01603-09

    authors: Volk SM,Chen R,Tsetsarkin KA,Adams AP,Garcia TI,Sall AA,Nasar F,Schuh AJ,Holmes EC,Higgs S,Maharaj PD,Brault AC,Weaver SC

    更新日期:2010-07-01 00:00:00

  • Development of bdellophage VL-1 in parasitic and saprophytic bdellovibrios.

    abstract::Ultrastructure was correlated with growth kinetics of bdellophage VL-1 infecting host-dependent ("parasitic") Bdellovibrio bacteriovorus 109J in its Escherichia coli B host (the three-membered system), as well as in the host-independent ("saprophytic") derivative of the Bdellovibrio. Electron microscope observations s...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.12.6.1522-1533.1973

    authors: Kessel M,Varon M

    更新日期:1973-12-01 00:00:00

  • Early events after infection of Escherichia coli by bacteriophage T5. III. Inhibition of uracil-DNA glycosylase activity.

    abstract::The activity of uracil-DNA glycosylase in Escherichia coli decreases dramatically to less than 10% of its original level after infection of the cells by phage T5. Phage-induced protein synthesis is required for this inhibition to occur, and the inhibition is induced by a mutant capable of injecting only the first 8% o...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.33.1.535-538.1980

    authors: Warner HR,Johnson LK,Snustad DP

    更新日期:1980-01-01 00:00:00

  • New deletion mutant of bacteriophage T5.

    abstract::Deletion mutants of bacteriphage T5 can be identified by analyzing the DNA content of single plaques, after alkaline denaturation, by agarose gel electrophoresis. Use of this procedure has resulted in the isolation of a new mutant, designated del2, that lacks a 1.6% segment located 68 to 70% from the left end of T5 DN...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.36.2.622-626.1980

    authors: Rhoades M,Schwartz J,Wahl JM

    更新日期:1980-11-01 00:00:00

  • Mutational analysis of the hepatitis C virus RNA helicase.

    abstract::The carboxyl-terminal three-fourths of the hepatitis C virus (HCV) NS3 protein has been shown to possess an RNA helicase activity, typical of members of the DEAD box family of RNA helicases. In addition, the NS3 protein contains four amino acid motifs conserved in DEAD box proteins. In order to inspect the roles of in...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.71.12.9400-9409.1997

    authors: Kim DW,Kim J,Gwack Y,Han JH,Choe J

    更新日期:1997-12-01 00:00:00

  • Elite controllers with low to absent effector CD8+ T cell responses maintain highly functional, broadly directed central memory responses.

    abstract::Analyses of the breadth and specificity of virus-specific CD8(+) T cell responses associated with control of HIV have largely relied on measurement of cytokine secretion by effector T cells. These have resulted in the identification of HIV elite controllers with low or absent responses in which non-T-cell mechanisms o...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00531-12

    authors: Ndhlovu ZM,Proudfoot J,Cesa K,Alvino DM,McMullen A,Vine S,Stampouloglou E,Piechocka-Trocha A,Walker BD,Pereyra F

    更新日期:2012-06-01 00:00:00

  • Cloning and analysis of integrated hepatitis virus sequences from a human hepatoma cell line.

    abstract::We report here the isolation by molecular cloning and the analysis by heteroduplex and restriction enzyme mapping of seven distinct DNA fragments containing hepatitis B virus (HBV) sequences from genomic DNA of the PLC/PRF/5 human liver carcinoma cell line (the Alexander cell). No intact full-length HBV genomes were p...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.51.3.776-787.1984

    authors: Shaul Y,Ziemer M,Garcia PD,Crawford R,Hsu H,Valenzuela P,Rutter WJ

    更新日期:1984-09-01 00:00:00

  • The Human Cytomegalovirus UL116 Gene Encodes an Envelope Glycoprotein Forming a Complex with gH Independently from gL.

    abstract:UNLABELLED:Human cytomegalovirus (HCMV) is a major cause of morbidity and mortality in transplant patients and is the leading viral cause of birth defects after congenital infection. HCMV infection relies on the recognition of cell-specific receptors by one of the viral envelope glycoprotein complexes. Either the gH/gL...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02517-15

    authors: Caló S,Cortese M,Ciferri C,Bruno L,Gerrein R,Benucci B,Monda G,Gentile M,Kessler T,Uematsu Y,Maione D,Lilja AE,Carfí A,Merola M

    更新日期:2016-04-29 00:00:00

  • Proteolytic processing and deubiquitinating activity of papain-like proteases of human coronavirus NL63.

    abstract::Human coronavirus NL63 (HCoV-NL63), a common human respiratory pathogen, is associated with both upper and lower respiratory tract disease in children and adults. Currently, no antiviral drugs are available to treat CoV infections; thus, potential drug targets need to be identified and characterized. Here, we identify...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02747-06

    authors: Chen Z,Wang Y,Ratia K,Mesecar AD,Wilkinson KD,Baker SC

    更新日期:2007-06-01 00:00:00

  • bcl-2 alters influenza virus yield, spread, and hemagglutinin glycosylation.

    abstract::We previously demonstrated that expression of bcl-2 in Madin-Darby canine kidney (MDCK) cells blocks influenza virus-induced apoptosis and DNA fragmentation. We show here that expression of bcl-2 also reduces the level of infectious virus production and the spread of virus in MDCK cell cultures infected at a low multi...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.70.1.663-666.1996

    authors: Olsen CW,Kehren JC,Dybdahl-Sissoko NR,Hinshaw VS

    更新日期:1996-01-01 00:00:00

  • Epithelial cell polarization is a determinant in the infectious outcome of immunoglobulin A-mediated entry by Epstein-Barr virus.

    abstract::Diseases of the nasopharyngeal epithelium due to Epstein-Barr virus (EBV) infection typically occur in chronic virus carriers with preexisting virus-specific antibodies. In vitro studies have shown that EBV-specific immunoglobulin A (IgA) promotes infection of human epithelial cells, otherwise refractory to EBV, via t...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.71.1.519-526.1997

    authors: Gan YJ,Chodosh J,Morgan A,Sixbey JW

    更新日期:1997-01-01 00:00:00

  • Activation of adenovirus early promoters and lytic phase in differentiated strata of organotypic cultures of human keratinocytes.

    abstract::Human oncolytic adenoviruses have been used in clinical trials targeting cancers of epithelial origin. To gain a better understanding of the infectious cycle of adenovirus in normal human squamous tissues, we examined the viral infection process in organotypic cultures of primary human keratinocytes. We show that for ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.77.11.6533-6540.2003

    authors: Noya F,Balagué C,Banerjee NS,Curiel DT,Broker TR,Chow LT

    更新日期:2003-06-01 00:00:00

  • Tissue-specific expression of rat c-ros-1 gene and partial structural similarity of its predicted products with sev protein of Drosophila melanogaster.

    abstract::The expression and predicted products of rat c-ros-1 gene, the proto-oncogene of v-ros in UR2 sarcoma virus, were characterized. The c-ros-1 gene was found to be expressed in a tissue-specific manner, and the sizes of its transcripts were heterogeneous: 8.2 kilobases (kb) long in lung and kidney tissues, 6.9 kb in hea...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.64.5.2117-2125.1990

    authors: Matsushime H,Shibuya M

    更新日期:1990-05-01 00:00:00

  • Lineage A Betacoronavirus NS2 Proteins and the Homologous Torovirus Berne pp1a Carboxy-Terminal Domain Are Phosphodiesterases That Antagonize Activation of RNase L.

    abstract::Viruses in the family Coronaviridae, within the order Nidovirales, are etiologic agents of a range of human and animal diseases, including both mild and severe respiratory diseases in humans. These viruses encode conserved replicase and structural proteins as well as more diverse accessory proteins, encoded in the 3' ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02201-16

    authors: Goldstein SA,Thornbrough JM,Zhang R,Jha BK,Li Y,Elliott R,Quiroz-Figueroa K,Chen AI,Silverman RH,Weiss SR

    更新日期:2017-02-14 00:00:00

  • Papilloma formation by cottontail rabbit papillomavirus requires E1 and E2 regulatory genes in addition to E6 and E7 transforming genes.

    abstract::The present study used the cottontail rabbit papillomavirus DNA-rabbit system to evaluate whether the regulatory genes E1 and E2 and the transforming gene E6 are required for papilloma formation. Frameshift mutations were generated in the individual genes in the context of a full-length cottontail rabbit papillomaviru...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.68.9.6097-6102.1994

    authors: Wu X,Xiao W,Brandsma JL

    更新日期:1994-09-01 00:00:00

  • Biological, physical, and chemical properties of Eastern equine encephalitis virus. I. Purification and physical properties.

    abstract::A new purification procedure was adopted for Eastern equine encephalitis virus which does not subject the virus to pelleting at any stage. Three- to 4-liter volumes were passed through a diethylaminoethyl cellulose column. The virus-containing fractions were banded on a sucrose cushion and finally concentrated in an i...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.7.2.233-240.1971

    authors: Fuscaldo AA,Aaslestad HG,Hoffman EJ

    更新日期:1971-02-01 00:00:00

  • The influenza virus panhandle is involved in the initiation of transcription.

    abstract::The role of the influenza A virus panhandle structure formed from the 3'- and 5'-terminal nucleotides of virion RNA segments was studied in both an RNA polymerase binding assay and an in vitro transcription assay. Despite recent indications that promoter activity is simply a function of the 3'-terminal sequence of vir...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.68.6.4092-4096.1994

    authors: Fodor E,Pritlove DC,Brownlee GG

    更新日期:1994-06-01 00:00:00

  • The 5' ends of Hantaan virus (Bunyaviridae) RNAs suggest a prime-and-realign mechanism for the initiation of RNA synthesis.

    abstract::We examined the 5' ends of Hantaan virus (HTN) genomes and mRNAs to gain insight into the manner in which these chains were initiated. Like those of all members of the family Bunyaviridae described so far, the HTN mRNAs contained 5' terminal extensions that were heterogeneous in both length and sequence, presumably be...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.69.9.5754-5762.1995

    authors: Garcin D,Lezzi M,Dobbs M,Elliott RM,Schmaljohn C,Kang CY,Kolakofsky D

    更新日期:1995-09-01 00:00:00

  • Induction of a major histocompatibility complex class I-restricted cytotoxic T-lymphocyte response to a highly conserved region of human immunodeficiency virus type 1 (HIV-1) gp120 in seronegative humans immunized with a candidate HIV-1 vaccine.

    abstract::Efforts to induce broadly reactive immunity against human immunodeficiency virus type 1 (HIV-1) have been impaired by the extent of sequence variation exhibited by this lentivirus. Cytotoxic T lymphocytes (CTL) specific for other viruses such as influenza virus have been shown to mediate immunity against divergent vir...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.68.5.3145-3153.1994

    authors: Johnson RP,Hammond SA,Trocha A,Siliciano RF,Walker BD

    更新日期:1994-05-01 00:00:00

  • Novel transcription map for the B19 (human) pathogenic parvovirus.

    abstract::The B19 parvovirus, a small single-stranded DNA virus of 5.4 kilobases, is pathogenic in humans. B19 has remarkable specificity for erythroid progenitor cells and has been propagated in vitro only with human erythroid bone marrow. Replication of viral DNA and the viral protein products of B19 appear similar to those o...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.61.8.2395-2406.1987

    authors: Ozawa K,Ayub J,Hao YS,Kurtzman G,Shimada T,Young N

    更新日期:1987-08-01 00:00:00