Two domains distantly related to protein-tyrosine kinases in the vesicular stomatitis virus polymerase.

Abstract:

:We have carried out an exhaustive search for amino acid sequence similarities between vesicular stomatitis virus (VSV) proteins and database entries. Unexpectedly, we found that the L polymerase protein contains two blocks of sequence (residues 725-1102 and 1291-1671) with distant but statistically significant similarity to the catalytic domain of tyrosine-specific protein kinases. The first kinase-like region is most similar to members of the Abl subfamily, Fes and Fps (26.6% and 27.3% identity, respectively), whereas the second region is closest to members of the platelet-derived growth factor receptor (PDGFR) subfamily, PDGFR and Kit (30.4% and 25.9% identity, respectively). Multiple alignment of the catalytic domain of these kinases to all three rhabdovirus L protein sequences available (VSV Indiana, VSV New Jersey, and rabies) revealed that the polymerases contain many but not all residues well conserved in the protein kinase family. Similarity was highest for VSV Indiana and lowest for rabies. We conclude that the kinase-like regions in the rhabdoviral L proteins are probably very distantly related to the protein kinase family. The similarities could either reflect contemporary protein kinase activity or represent some other function(s) associated with these large multifunctional polymerase proteins. Our findings also shed new light on questions of the origins and evolution of RNA viruses.

journal_name

Virology

journal_title

Virology

authors

McClure MA,Perrault J

doi

10.1016/0042-6822(89)90148-7

subject

Has Abstract

pub_date

1989-09-01 00:00:00

pages

391-7

issue

1

eissn

0042-6822

issn

1096-0341

journal_volume

172

pub_type

杂志文章

相关文献

VIROLOGY文献大全
  • Helper virus-dependent replication, nucleotide sequence and genome organization of the satellite virus of maize white line mosaic virus.

    abstract::Virus like particles (17 nm in diameter) associated with maize white line mosaic virus (MWLMV) were shown to be a satellite virus of MWLMV (SV-MWLMV) on the basis of the following properties: (1) The SV-MWLMV was dependent upon the presence of MWLMV for replication in maize, while the latter virus could replicate inde...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(91)90060-o

    authors: Zhang L,Zitter TA,Palukaitis P

    更新日期:1991-02-01 00:00:00

  • Evidence for spontaneous circle formation in the replication of the satellite RNA of tobacco ringspot virus.

    abstract::Replication of the satellite RNA of tobacco ringspot virus (sTobRV RNA) has been postulated to require rolling circle transcription. The expected product of rolling circle transcription, multimeric sTobRV RNA, is known to undergo self-cleavage in vitro to release unit-length sTobRV RNA. A spontaneous, efficient, not e...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(91)90005-v

    authors: Van Tol H,Buzayan JM,Bruening G

    更新日期:1991-01-01 00:00:00

  • The carboxy-terminal domain is essential for stability and not for virion incorporation of HIV-1 Vpr into virus particles.

    abstract::Vpr is one of the auxiliary gene products encoded by HIV-1 genome. Vpr is a 14-kDa protein and exhibits several interesting characteristics including incorporation into virus particles, oligomerization, localization in the nucleus, and positive regulation of virus replication in primary cells. In an effort to define t...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1995.0079

    authors: Mahalingam S,Patel M,Collman RG,Srinivasan A

    更新日期:1995-12-20 00:00:00

  • An improved reverse genetics system for mammalian orthoreoviruses.

    abstract::Mammalian orthoreoviruses (reoviruses) are highly useful models for studies of double-stranded RNA virus replication and pathogenesis. We previously developed a strategy to recover prototype reovirus strain T3D from cloned cDNAs transfected into murine L929 fibroblast cells. Here, we report the development of a second...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2009.11.037

    authors: Kobayashi T,Ooms LS,Ikizler M,Chappell JD,Dermody TS

    更新日期:2010-03-15 00:00:00

  • Polymorphisms of the cytidine deaminase APOBEC3F have different HIV-1 restriction efficiencies.

    abstract::The APOBEC3 enzyme family are host restriction factors that induce mutagenesis of HIV-1 proviral genomes through the deamination of cytosine to form uracil in nascent single-stranded (-)DNA. HIV-1 suppresses APOBEC3 activity through the HIV-1 protein Vif that induces APOBEC3 degradation. Here we compared two common po...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2018.11.004

    authors: Mohammadzadeh N,Follack TB,Love RP,Stewart K,Sanche S,Chelico L

    更新日期:2019-01-15 00:00:00

  • Heat shock protein 90AB1 and hyperthermia rescue infectivity of HIV with defective cores.

    abstract::We previously showed that reduced infectivity of HIV with incompletely processed capsid-spacer protein 1 (CA-SP1) is rescued by cellular activation or increased expression of HSP90AB1, a member of the cytosolic heat shock protein 90 family. Here we show that HSP90AB1 is present in HIV virions and that HSP90AB1, but no...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2012.11.005

    authors: Joshi P,Sloan B,Torbett BE,Stoddart CA

    更新日期:2013-02-05 00:00:00

  • The complete genomic sequence of lytic bacteriophage gh-1 infecting Pseudomonas putida--evidence for close relationship to the T7 group.

    abstract::The genome of the lytic Pseudomonas putida bacteriophage gh-1 is linear double-stranded DNA containing 37,359 bp with 216-bp direct terminal repeats. Like other members of the T7 group, the gh-1 genome contains regions of high homology to T7 interspersed with nonhomologous regions that contain small open reading frame...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/s0042-6822(03)00124-7

    authors: Kovalyova IV,Kropinski AM

    更新日期:2003-07-05 00:00:00

  • Unexpected patterns of Epstein-Barr virus transcription revealed by a high throughput PCR array for absolute quantification of viral mRNA.

    abstract::We have validated a flexible, high-throughput and relatively inexpensive RT-QPCR array platform for absolute quantification of Epstein-Barr virus transcripts in different latent and lytic infection states. Several novel observations are reported. First, during infection of normal B cells, Wp-initiated latent gene tran...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2014.10.030

    authors: Tierney RJ,Shannon-Lowe CD,Fitzsimmons L,Bell AI,Rowe M

    更新日期:2015-01-01 00:00:00

  • Recombinant human parainfluenza virus type 2 with mutations in V that permit cellular interferon signaling are not attenuated in non-human primates.

    abstract::The HPIV2 V protein inhibits type I interferon (IFN) induction and signaling. To manipulate the V protein, whose coding sequence overlaps that of the polymerase-associated phosphoprotein (P), without altering the P protein, we generated an HPIV2 virus in which P and V are expressed from separate genes (rHPIV2-P+V). rH...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2010.07.011

    authors: Schaap-Nutt A,D'Angelo C,Amaro-Carambot E,Nolan SM,Davis S,Wise SM,Higgins C,Bradley K,Kim O,Mayor R,Skiadopoulos MH,Collins PL,Murphy BR,Schmidt AC

    更新日期:2010-10-10 00:00:00

  • The sweet quartet: Binding of fucose to the norovirus capsid.

    abstract::Human noroviruses bind histo-blood group antigens (HBGAs) and this interaction is thought to be important for an infection. We identified two additional fucose-binding pockets (termed fucose-3/4 sites) on a genogroup II human (GII.10) norovirus-protruding (P) dimer using X-ray crystallography. Fucose-3/4 sites were lo...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2015.04.006

    authors: Koromyslova AD,Leuthold MM,Bowler MW,Hansman GS

    更新日期:2015-09-01 00:00:00

  • Successful protection by amantadine hydrochloride against lethal encephalitis caused by a highly neurovirulent recombinant influenza A virus in mice.

    abstract::A mouse model system for a lethal encephalitis due to influenza has been established by stereotaxic microinjection with the recombinant R404BP strain of influenza A virus into the olfactory bulb of C57BL/6 mice. The virus infection spread selectively to neurons in nuclei of the broad areas of the brain parenchyma that...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2002.1601

    authors: Mori I,Liu B,Hossain MJ,Takakuwa H,Daikoku T,Nishiyama Y,Naiki H,Matsumoto K,Yokochi T,Kimura Y

    更新日期:2002-11-25 00:00:00

  • The ecology of primate retroviruses - an assessment of 12 years of retroviral studies in the Taï national park area, Côte d׳Ivoire.

    abstract::The existence and genetic make-up of most primate retroviruses was revealed by studies of bushmeat and fecal samples from unhabituated primate communities. For these, detailed data on intra- and within-species contact rates are generally missing, which makes identification of factors influencing transmission a challen...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2014.05.012

    authors: Gogarten JF,Akoua-Koffi C,Calvignac-Spencer S,Leendertz SA,Weiss S,Couacy-Hymann E,Koné I,Peeters M,Wittig RM,Boesch C,Hahn BH,Leendertz FH

    更新日期:2014-07-01 00:00:00

  • The endogenous langur type D retrovirus PO-1-Lu and its exogenous counterparts in macaque and langur monkeys.

    abstract::PO-1-Lu, the endogenous type D retrovirus of langurs (Trachypithecus obscurus) has previously been considered a progenitor to the prototype type D retrovirus, Mason Pfizer monkey virus (M-PMV/SRV-3), that became established in macaque monkeys (Macaca spp.) following a zoonosis. This study reevaluates this hypothesis t...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/s0042-6822(03)00548-8

    authors: Sommerfelt MA,Harkestad N,Hunter E

    更新日期:2003-10-25 00:00:00

  • The antimicrobial peptide HS-1 inhibits dengue virus infection.

    abstract::Dengue virus (DENV) is an arbovirus that belongs to the Flaviviridae family. Studies reveal that peptides secreted by amphibians have many functions, such as antiviral and antimicrobial activities. As there is no antiviral drug effective against the DENV, the antiviral activity of a synthetic peptide called HS-1, deri...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2017.11.009

    authors: Monteiro JMC,Oliveira MD,Dias RS,Nacif-Marçal L,Feio RN,Ferreira SO,Oliveira LL,Silva CC,Paula SO

    更新日期:2018-01-15 00:00:00

  • Common modular structure of lentivirus LTRs.

    abstract::Retroviruses are expressed under the control of viral control regions designated long terminal repeats (LTRs), which contain all signals for transcriptional initiation as well as transcriptional termination. However, retroviral LTRs from different species within a common genus, such as Lentivirus, do not show signific...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1996.0527

    authors: Frech K,Brack-Werner R,Werner T

    更新日期:1996-10-01 00:00:00

  • Virological and molecular characterization of a simian human immunodeficiency virus (SHIV) encoding the envelope and reverse transcriptase genes from HIV-1.

    abstract::Simian-human immunodeficiency virus encoding both reverse transcriptase (RT) and envelope genes of HIV-1 (RT Env SHIV) is important for evaluating biomedical prevention modalities for HIV/AIDS. We describe virological characterization of a clade B RT Env SHIV following infection of macaques via multiple routes. In viv...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2012.05.034

    authors: Pal R,Galmin L,Pereira LE,Li B,Zhang J,Li D,Francis J,McNicholl JM,Weiss DE,Smith JM

    更新日期:2012-10-10 00:00:00

  • Mitigation of variation observed in a peripheral blood mononuclear cell (PBMC) based HIV-1 neutralization assay by donor cell pooling.

    abstract::Cultured primary peripheral blood mononuclear cells (PBMC) represent a potentially physiologic in vitro model of HIV-1 infection, but assessment of antibody-mediated HIV-1 neutralization using PBMC has been hindered by donor variability and lack of a sustainable individual PBMC source. To advance this model for HIV va...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2013.09.014

    authors: Wieczorek L,Brown BK,Delsarto Macedo C,Wesberry-Schmierer M,Ngauy V,Rosa Borges A,Michael NL,Marovich MA,Montefiori DC,Polonis VR

    更新日期:2013-12-01 00:00:00

  • Synergism between bovine papillomavirus type 4 and the flavonoid quercetin in cell transformation in vitro.

    abstract::Bovine papillomavirus type 4 (BPV-4) morphologically transforms primary bovine cells in vitro only in the presence of an activated ras gene. The transformed cells are capable of anchorage-independent growth, but are not immortal and are incapable of inducing tumors in nude mice, suggesting that other events are needed...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(92)90926-g

    authors: Pennie WD,Campo MS

    更新日期:1992-10-01 00:00:00

  • Antibodies that neutralize SIV(mac)251 in T lymphocytes cause interruption of the viral life cycle in macrophages by preventing nuclear import of viral DNA.

    abstract::Previous reports from our lab had shown that sera obtained from SIV(mac)-infected animals neutralized SIV(mac) infectivity in CD4(+) T cells but failed to protect monkey primary macrophages from infection with the virus. However, the antibodies could inhibit completion of the viral life cycle in the macrophages at the...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2001.1053

    authors: Zhuge W,Jia F,Mackay G,Kumar A,Narayan O

    更新日期:2001-09-01 00:00:00

  • Establishment of cell lines persistently infected with foot-and-mouth disease virus.

    abstract::Cell lines persistently infected with foot-and-mouth disease virus (FMDV) have been established by growth of BHK-21 (c-13) or IBRS-2 (c-26) that survived standard cytolytic infections with FMDV. They maintain cytoplasmic FMDV RNA sequences, as shown by dot blot hybridization tests, using cloned FMDV cDNA as probes. Ce...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(85)90198-9

    authors: de la Torre JC,Dávila M,Sobrino F,Ortín J,Domingo E

    更新日期:1985-08-01 00:00:00

  • Adenovirus interactions with CD46 on transgenic mouse erythrocytes.

    abstract::Hemagglutination is an established method but has not been used previously to determine the efficacy of virus binding to a specific cellular receptor. Here we have utilized CD46-expressing erythrocytes from a transgenic mouse to establish whether and to what extent the species B adenoviruses (Ads) as well as Ad37 and ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2010.03.004

    authors: Andersson EK,Mei YF,Wadell G

    更新日期:2010-06-20 00:00:00

  • Antibody neutralization of retargeted measles viruses.

    abstract::The measles virus (MV) vaccine lineage is a promising oncolytic but prior exposure to the measles vaccine or wild-type MV strains limits treatment utility due to the presence of anti-measles antibodies. MV entry can be redirected by displaying a polypeptide ligand on the Hemagglutinin (H) C-terminus. We hypothesized t...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2014.01.027

    authors: Lech PJ,Pappoe R,Nakamura T,Tobin GJ,Nara PL,Russell SJ

    更新日期:2014-04-01 00:00:00

  • Alfalfa mosaic virus temperature-sensitive mutants. V. The nucleotide sequence of TBTS 7 RNA 3 shows limited nucleotide changes and evidence for heterologous recombination.

    abstract::Nucleotide sequence determination of the coat protein cistron of the alfalfa mosaic virus (AIMV) temperature-sensitive mutant, Tbts 7 (uv) revealed a small number of point mutations of which only one results in the replacement of an amino acid: the asparagine residue at position 126 is replaced by an aspartate residue...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(89)90609-0

    authors: Huisman MJ,Cornelissen BJ,Groenendijk CF,Bol JF,van Vloten-Doting L

    更新日期:1989-08-01 00:00:00

  • African swine fever virus EP153R open reading frame encodes a glycoprotein involved in the hemadsorption of infected cells.

    abstract::The open reading frame EP153R, located within the EcoRI E' fragment of the African swine fever (ASF) virus genome, is predicted to encode a membrane protein of 153 amino acids that presents significant homology to the N-terminal region of several CD44 molecules. EP153R contains multiple putative sites for N-glycosylat...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1999.0080

    authors: Galindo I,Almazán F,Bustos MJ,Viñuela E,Carrascosa AL

    更新日期:2000-01-20 00:00:00

  • Identification of residues on human receptor DPP4 critical for MERS-CoV binding and entry.

    abstract::Middle East respiratory syndrome coronavirus (MERS-CoV) infects host cells through binding the receptor binding domain (RBD) on its spike glycoprotein to human receptor dipeptidyl peptidase 4 (hDPP4). Here, we report identification of critical residues on hDPP4 for RBD binding and virus entry through analysis of a pan...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2014.10.006

    authors: Song W,Wang Y,Wang N,Wang D,Guo J,Fu L,Shi X

    更新日期:2014-12-01 00:00:00

  • Assembly of viroplasm and virus-like particles of rotavirus by a Semliki Forest virus replicon.

    abstract::In this study we have used an expression system based on Semliki Forest virus (SFV) to study assembly and intracellular localization of certain capsid proteins of rotavirus in neurons and mammalian epithelial cells. The complete genes of vp2 (vp2A) and vp6 (vp6A) of group A rotavirus (SA-11) and gene 5 encoding vp6 (v...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1997.8987

    authors: Nilsson M,von Bonsdorff CH,Weclewicz K,Cohen J,Svensson L

    更新日期:1998-03-15 00:00:00

  • The stability of the human papillomavirus E6 oncoprotein is E6AP dependent.

    abstract::Human papillomavirus (HPV) E6 oncoproteins target numerous cellular proteins for ubiquitin-mediated degradation. In the case of p53 this is mediated by the E6AP ubiquitin ligase. However, there are conflicting reports concerning how central E6AP is to the global function of the HPV-16 and HPV-18 E6 oncoproteins. To in...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2009.07.029

    authors: Tomaić V,Pim D,Banks L

    更新日期:2009-10-10 00:00:00

  • DNA processing in temperature-sensitive morphogenic mutants of HSV-1.

    abstract::The anatomy of DNA synthesized by five HSV-1 mutants previously shown to accumulate predominantly empty capsids at the nonpermissive temperature (NPT) was analyzed with Bg/II restriction digestion. At the NPT, all five generated DNA lacking termini, indicating that in the absence of packaging, viral DNA is not process...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(87)90214-5

    authors: Sherman G,Bachenheimer SL

    更新日期:1987-06-01 00:00:00

  • JNK phosphorylation, induced during dengue virus infection, is important for viral infection and requires the presence of cholesterol.

    abstract::Infection with a broad diversity of viruses often activates host cell signaling pathways including the mitogen-activated protein kinase pathway. The present study established that dengue virus infection of human macrophages activates Jun NH(2)-terminal kinase (JNK) and the p38 MAPKs pathways. The activation was observ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2009.10.019

    authors: Ceballos-Olvera I,Chávez-Salinas S,Medina F,Ludert JE,del Angel RM

    更新日期:2010-01-05 00:00:00

  • Effect of receptor binding domain mutations on receptor binding and transmissibility of avian influenza H5N1 viruses.

    abstract::Although H5N1 influenza viruses have been responsible for hundreds of human infections, these avian influenza viruses have not fully adapted to the human host. The lack of sustained transmission in humans may be due, in part, to their avian-like receptor preference. Here, we have introduced receptor binding domain mut...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2011.02.015

    authors: Maines TR,Chen LM,Van Hoeven N,Tumpey TM,Blixt O,Belser JA,Gustin KM,Pearce MB,Pappas C,Stevens J,Cox NJ,Paulson JC,Raman R,Sasisekharan R,Katz JM,Donis RO

    更新日期:2011-04-25 00:00:00