Abstract:
:The recent Zika virus outbreak highlights the need for low-cost diagnostics that can be rapidly developed for distribution and use in pandemic regions. Here, we report a pipeline for the rapid design, assembly, and validation of cell-free, paper-based sensors for the detection of the Zika virus RNA genome. By linking isothermal RNA amplification to toehold switch RNA sensors, we detect clinically relevant concentrations of Zika virus sequences and demonstrate specificity against closely related Dengue virus sequences. When coupled with a novel CRISPR/Cas9-based module, our sensors can discriminate between viral strains with single-base resolution. We successfully demonstrate a simple, field-ready sample-processing workflow and detect Zika virus from the plasma of a viremic macaque. Our freeze-dried biomolecular platform resolves important practical limitations to the deployment of molecular diagnostics in the field and demonstrates how synthetic biology can be used to develop diagnostic tools for confronting global health crises. PAPERCLIP.
journal_name
Celljournal_title
Cellauthors
Pardee K,Green AA,Takahashi MK,Braff D,Lambert G,Lee JW,Ferrante T,Ma D,Donghia N,Fan M,Daringer NM,Bosch I,Dudley DM,O'Connor DH,Gehrke L,Collins JJdoi
10.1016/j.cell.2016.04.059subject
Has Abstractpub_date
2016-05-19 00:00:00pages
1255-1266issue
5eissn
0092-8674issn
1097-4172pii
S0092-8674(16)30505-0journal_volume
165pub_type
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