Rapid, Low-Cost Detection of Zika Virus Using Programmable Biomolecular Components.

Abstract:

:The recent Zika virus outbreak highlights the need for low-cost diagnostics that can be rapidly developed for distribution and use in pandemic regions. Here, we report a pipeline for the rapid design, assembly, and validation of cell-free, paper-based sensors for the detection of the Zika virus RNA genome. By linking isothermal RNA amplification to toehold switch RNA sensors, we detect clinically relevant concentrations of Zika virus sequences and demonstrate specificity against closely related Dengue virus sequences. When coupled with a novel CRISPR/Cas9-based module, our sensors can discriminate between viral strains with single-base resolution. We successfully demonstrate a simple, field-ready sample-processing workflow and detect Zika virus from the plasma of a viremic macaque. Our freeze-dried biomolecular platform resolves important practical limitations to the deployment of molecular diagnostics in the field and demonstrates how synthetic biology can be used to develop diagnostic tools for confronting global health crises. PAPERCLIP.

journal_name

Cell

journal_title

Cell

authors

Pardee K,Green AA,Takahashi MK,Braff D,Lambert G,Lee JW,Ferrante T,Ma D,Donghia N,Fan M,Daringer NM,Bosch I,Dudley DM,O'Connor DH,Gehrke L,Collins JJ

doi

10.1016/j.cell.2016.04.059

subject

Has Abstract

pub_date

2016-05-19 00:00:00

pages

1255-1266

issue

5

eissn

0092-8674

issn

1097-4172

pii

S0092-8674(16)30505-0

journal_volume

165

pub_type

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