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Whole genome de novo sequencing and genome annotation of the world popular cultivated edible mushroom, Lentinula edodes.

Abstract：

:Lentinula edodes, the popular shiitake mushroom, is one of the most important cultivated edible mushrooms. It is used as a food and for medicinal purposes. Here, we present the 46.1 Mb draft genome of L. edodes, comprising 13,028 predicted gene models. The genome assembly consists of 31 scaffolds. Gene annotation provides key information about various signaling pathways and secondary metabolites. This genomic information should help establish the molecular genetic markers for MAS/MAB and increase our understanding of the genome structure and function.

journal_name

J Biotechnol

journal_title

Journal of biotechnology

authors

Shim D,Park SG,Kim K,Bae W,Lee GW,Ha BS,Ro HS,Kim M,Ryoo R,Rhee SK,Nou IS,Koo CD,Hong CP,Ryu H

doi

10.1016/j.jbiotec.2016.02.032

subject

Has Abstract

pub_date

2016-04-10 00:00:00

pages

24-5

eissn

0168-1656

issn

1873-4863

pii

S0168-1656(16)30084-0

journal_volume

223

pub_type

杂志文章

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