Automated 3D ultrasound image analysis for first trimester assessment of fetal health.

Abstract:

:The first trimester fetal ultrasound scan is important to confirm fetal viability, to estimate the gestational age of the fetus, and to detect fetal anomalies early in pregnancy. First trimester ultrasound images have a different appearance than for the second trimester scan, reflecting the different stage of fetal development. There is limited literature on automation of image-based assessment for this earlier trimester, and most of the literature is focused on one specific fetal anatomy. In this paper, we consider automation to support first trimester fetal assessment of multiple fetal anatomies including both visualization and the measurements from a single 3D ultrasound scan. We present a deep learning and image processing solution (i) to perform semantic segmentation of the whole fetus, (ii) to estimate plane orientation for standard biometry views, (iii) to localize and automatically estimate biometry, and (iv) to detect fetal limbs from a 3D first trimester volume. Computational analysis methods were built using a real-world dataset (n  =  44 volumes). An evaluation on a further independent clinical dataset (n  =  21 volumes) showed that the automated methods approached human expert assessment of a 3D volume.

journal_name

Phys Med Biol

authors

Ryou H,Yaqub M,Cavallaro A,Papageorghiou AT,Alison Noble J

doi

10.1088/1361-6560/ab3ad1

subject

Has Abstract

pub_date

2019-09-17 00:00:00

pages

185010

issue

18

eissn

0031-9155

issn

1361-6560

journal_volume

64

pub_type

杂志文章
  • Comparison of risk of radiogenic second cancer following photon and proton craniospinal irradiation for a pediatric medulloblastoma patient.

    abstract::Pediatric patients who received radiation therapy are at risk of developing side effects such as radiogenic second cancer. We compared proton and photon therapies in terms of the predicted risk of second cancers for a 4 year old medulloblastoma patient receiving craniospinal irradiation (CSI). Two CSI treatment plans ...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/58/4/807

    authors: Zhang R,Howell RM,Giebeler A,Taddei PJ,Mahajan A,Newhauser WD

    更新日期:2013-02-21 00:00:00

  • A new approach to account for the medium-dependent effect in model-based dose calculations for kilovoltage x-rays.

    abstract::This study presents a new approach to accurately account for the medium-dependent effect in model-based dose calculations for kilovoltage (kV) x-rays. This approach is based on the hypothesis that the correction factors needed to convert dose from model-based dose calculations to absorbed dose-to-medium depend on both...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/56/13/011

    authors: Pawlowski JM,Ding GX

    更新日期:2011-07-07 00:00:00

  • Comments on 'The influence of dose heterogeneity on tumor control probability in fractionated radiation therapy'.

    abstract::By analyzing the radiobiological model, and the equations derived from the model, it is shown that the main results of the article 'The influence of dose heterogeneity on tumor control probability in fractionated radiation therapy' by Wiklund et al (2011 Phys. Med. Biol. 56 7585-600) are valid only under the condition...

    journal_title:Physics in medicine and biology

    pub_type: 评论,信件

    doi:10.1088/0031-9155/58/18/6585

    authors: Grusell E

    更新日期:2013-09-21 00:00:00

  • An experimental evaluation of the Agility MLC for motion-compensated VMAT delivery.

    abstract::An algorithm for dynamic multileaf-collimator (dMLC) tracking of a target performing a known a priori, rigid-body motion during volumetric modulated arc therapy (VMAT), has been experimentally validated and applied to investigate the potential of the Agility (Elekta AB, Stockholm, Sweden) multileaf-collimator (MLC) fo...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/58/13/4643

    authors: Davies GA,Clowes P,Bedford JL,Evans PM,Webb S,Poludniowski G

    更新日期:2013-07-07 00:00:00

  • Improved correction for the tissue fraction effect in lung PET/CT imaging.

    abstract::Recently, there has been an increased interest in imaging different pulmonary disorders using PET techniques. Previous work has shown, for static PET/CT, that air content in the lung influences reconstructed image values and that it is vital to correct for this 'tissue fraction effect' (TFE). In this paper, we extend ...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/60/18/7387

    authors: Holman BF,Cuplov V,Millner L,Hutton BF,Maher TM,Groves AM,Thielemans K

    更新日期:2015-09-21 00:00:00

  • Proton-counting radiography for proton therapy: a proof of principle using CMOS APS technology.

    abstract::Despite the early recognition of the potential of proton imaging to assist proton therapy (Cormack 1963 J. Appl. Phys. 34 2722), the modality is still removed from clinical practice, with various approaches in development. For proton-counting radiography applications such as computed tomography (CT), the water-equival...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/59/11/2569

    authors: Poludniowski G,Allinson NM,Anaxagoras T,Esposito M,Green S,Manolopoulos S,Nieto-Camero J,Parker DJ,Price T,Evans PM

    更新日期:2014-06-07 00:00:00

  • Use of an amorphous silicon EPID for measuring MLC calibration at varying gantry angle.

    abstract::Amorphous silicon electronic portal imaging devices (EPIDs) are used to perform routine quality control (QC) checks on the multileaf collimators (MLCs) at this centre. Presently, these checks are performed at gantry angle 0 degrees and are considered to be valid for all other angles. Since therapeutic procedures regul...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/53/2/013

    authors: Clarke MF,Budgell GJ

    更新日期:2008-01-21 00:00:00

  • Dose uncertainty in radiotherapy of patients with head and neck cancer measured by in vivo ESR/alanine dosimetry using a mouthpiece.

    abstract::In order (i) to evaluate the dose uncertainty of the mouthpiece in daily use during intensity-modulated radiotherapy of patients with head and neck cancer, and (ii) to present a system for in vivo dosimetry of the oral mucosa, we equipped the mouthpiece with alanine dosimeter probes for in vivo dosimetry. The aim was ...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/56/5/010

    authors: Wagner D,Anton M,Vorwerk H

    更新日期:2011-03-07 00:00:00

  • ALGEBRA: ALgorithm for the heterogeneous dosimetry based on GEANT4 for BRAchytherapy.

    abstract::Task group 43 (TG43)-based dosimetry algorithms are efficient for brachytherapy dose calculation in water. However, human tissues have chemical compositions and densities different than water. Moreover, the mutual shielding effect of seeds on each other (interseed attenuation) is neglected in the TG43-based dosimetry ...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/57/11/3273

    authors: Afsharpour H,Landry G,D'Amours M,Enger S,Reniers B,Poon E,Carrier JF,Verhaegen F,Beaulieu L

    更新日期:2012-06-07 00:00:00

  • Modeling silicon diode energy response factors for use in therapeutic photon beams.

    abstract::Silicon diodes have good spatial resolution, which makes them advantageous over ionization chambers for dosimetry in fields with high dose gradients. However, silicon diodes overrespond to low-energy photons, that are more abundant in scatter which increase with large fields and larger depths. We present a cavity-theo...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/54/20/007

    authors: Eklund K,Ahnesjö A

    更新日期:2009-10-21 00:00:00

  • Sensitivity study of the microdosimetric kinetic model parameters for carbon ion radiotherapy.

    abstract::In carbon ion therapy treatment planning, the relative biological effectiveness (RBE) is accounted for by optimization of the RBE-weighted dose (biological dose). The RBE calculation methods currently applied clinically in carbon ion therapy are derived from the microdosimetric kinetic model (MKM) in Japan and the loc...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/1361-6560/aae8b4

    authors: Dahle TJ,Magro G,Ytre-Hauge KS,Stokkevåg CH,Choi K,Mairani A

    更新日期:2018-11-12 00:00:00

  • A theoretical approach for non-equilibrium radiation dosimetry.

    abstract::This study presents a theoretical approach to the dosimetry for small and non-equilibrium radiation fields. We applied the newly developed VMCBC algorithm to the dosimetry for megavoltage photon beams using Monte Carlo techniques. The approach assumes that a Monte Carlo simulated beam can be calibrated per incident pa...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/53/13/006

    authors: Ding GX,Duggan DM,Coffey CW

    更新日期:2008-07-07 00:00:00

  • Directional dependence in film dosimetry: radiographic and radiochromic film.

    abstract::The trend towards conformal, intensity modulated radiotherapy treatments has established the need for a true integrating dosimeter. In traditional radiotherapy, radiographic film dosimetry is commonly used. The accuracy and reproducibility of film optical density as an indicator of dose is influenced by several variab...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/46/5/305

    authors: Suchowerska N,Hoban P,Butson M,Davison A,Metcalfe P

    更新日期:2001-05-01 00:00:00

  • Intensity modulated radiation therapy for oropharyngeal cancer: the sensitivity of plan objectives and constraints to set-up uncertainty.

    abstract::The goal of this study was to assess the impact of set-up uncertainty on compliance with the objectives and constraints of an intensity modulated radiation therapy protocol for early stage cancer of the oropharynx. As the convolution approach to the quantitative study of set-up uncertainties cannot accommodate either ...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/50/15/003

    authors: Ploquin N,Song W,Lau H,Dunscombe P

    更新日期:2005-08-07 00:00:00

  • Ionization quenching in scintillators used for dosimetry of mixed particle fields.

    abstract::Ionization quenching in ion beam dosimetry is often related to the fluence- or dose-averaged linear energy transfer (LET). Both quantities are however averaged over a wide LET range and a mixed field of primary and secondary ions. We propose a novel method to correct the quenched luminescence in scintillators exposed ...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/1361-6560/ab12f2

    authors: Christensen JB,Almhagen E,Stolarczyk L,Vestergaard A,Bassler N,Andersen CE

    更新日期:2019-04-29 00:00:00

  • Real-time tracking of tumor motions and deformations along the leaf travel direction with the aid of a synchronized dynamic MLC leaf sequencer.

    abstract::Advanced radiotherapeutical techniques like intensity-modulated radiation therapy (IMRT) are based on an accurate knowledge of the location of the radiation target. An accurate dose delivery, therefore, requires a method to account for the inter- and intrafractional target motion and the target deformation occurring d...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/52/22/N01

    authors: Tacke M,Nill S,Oelfke U

    更新日期:2007-11-21 00:00:00

  • THz time domain spectroscopy of biomolecular conformational modes.

    abstract::We discuss the use of terahertz time domain spectroscopy for studies of conformational flexibility and conformational change in biomolecules. Protein structural dynamics are vital to biological function with protein flexibility affecting enzymatic reaction rates and sensory transduction cycling times. Conformational m...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/47/21/318

    authors: Markelz A,Whitmire S,Hillebrecht J,Birge R

    更新日期:2002-11-07 00:00:00

  • An analysis of beam parameters on proton-acoustic waves through an analytic approach.

    abstract::It has been reported that acoustic waves are generated when a high-energy pulsed proton beam is deposited in a small volume within tissue. One possible application of proton-induced acoustics is to get real-time feedback for intra-treatment adjustments by monitoring such acoustic waves. A high spatial resolution in ul...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/1361-6560/aa642c

    authors: Kipergil EA,Erkol H,Kaya S,Gulsen G,Unlu MB

    更新日期:2017-06-21 00:00:00

  • A dedicated phantom design for positron emission mammography performance evaluation.

    abstract::A standard protocol for performance evaluation of positron emission mammography (PEM) systems has not yet been established. In this work we propose a methodology based on the design of specific phantoms for this imaging modality with component dimensions in accordance with typical breast lesion sizes together with the...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/1361-6560/aba7d1

    authors: Torres-Urzúa LF,Alva-Sanchez H,Martinez-Davalos A,García-Pérez FO,Peruyero-Rivas RM,Rodriguez-Villafuerte M

    更新日期:2020-07-21 00:00:00

  • Aluminum equivalence of materials used in diagnostic radiology and its dependence on beam quality.

    abstract::A semi-empirical theory has been derived that relates the aluminum equivalence of various materials used in diagnostic radiology to their attenuation coefficients. The dependence of the aluminum hardness (AHE) and attenuation (AAE) equivalent on the beam quality is described in terms of effective energy. This 'aluminu...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/31/12/006

    authors: Nagel HD

    更新日期:1986-12-01 00:00:00

  • Mapping initial and general recombination in scanning proton pencil beams.

    abstract::The ion recombination is examined in parallel-plate ionization chambers in scanning proton beams at the Danish Centre for Particle Therapy and the Skandion Clinic. The recombination correction factor k s is investigated for clinically relevant energies between 70 MeV and 244 MeV for dose rates below 400 Gy min-1 in ai...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/1361-6560/ab8579

    authors: Christensen JB,Almhagen E,Stolarczyk L,Liszka M,Hernandez GG,Bassler N,Nørrevang O,Vestergaard A

    更新日期:2020-06-05 00:00:00

  • Design and performance of the micro-dose calibrator.

    abstract::A new class of dose calibrator called a micro-dose calibrator, designed to measure radioactivity rates in the range between 1 kBq up to 370 kBq, has been designed and an 8 NaI(Tl)/photo multiplier tube (PMT) module prototype built to evaluate its performance. The design of the micro-dose calibrator is based on the con...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/1361-6560/aadb3b

    authors: Adler S,Choyke P

    更新日期:2018-09-10 00:00:00

  • A robust optimization method for weighted-layer-stacking proton beam therapy.

    abstract::The layer-stacking method can provide three-dimensional conformal dose distributions to the target based on a passive scattering method using mini-spread-out Bragg peak (SOBP). The purpose of this work is to demonstrate the effectiveness of a new weight optimization algorithm that can enhance the robustness of dose di...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/1361-6560/ab9efd

    authors: Sakamoto Y,Maeda Y,Yamada Y,Ikeda M,Tameshige Y,Sasaki M,Shibata S,Yamamoto K

    更新日期:2020-09-28 00:00:00

  • An investigation into the vector ellipticity of extremely low frequency magnetic fields from appliances in UK homes.

    abstract::Elliptically polarized magnetic fields induce higher currents in the body compared with their plane polarized counterparts. This investigation examines the degree of vector ellipticity of extremely low frequency magnetic fields (ELF-MFs) in the home, with regard to the adverse health effects reportedly associated with...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/50/13/016

    authors: Ainsbury EA,Conein E,Henshaw DL

    更新日期:2005-07-07 00:00:00

  • Beveled fiber-optic probe couples a ball lens for improving depth-resolved fluorescence measurements of layered tissue: Monte Carlo simulations.

    abstract::In this study, we evaluate the feasibility of designing a beveled fiber-optic probe coupled with a ball lens for improving depth-resolved fluorescence measurements of epithelial tissue using Monte Carlo (MC) simulations. The results show that by using the probe configuration with a beveled tip collection fiber and a f...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/53/4/008

    authors: Jaillon F,Zheng W,Huang Z

    更新日期:2008-02-21 00:00:00

  • Accounting for range uncertainties in the optimization of intensity modulated proton therapy.

    abstract::Treatment plans optimized for intensity modulated proton therapy (IMPT) may be sensitive to range variations. The dose distribution may deteriorate substantially when the actual range of a pencil beam does not match the assumed range. We present two treatment planning concepts for IMPT which incorporate range uncertai...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/52/10/009

    authors: Unkelbach J,Chan TC,Bortfeld T

    更新日期:2007-05-21 00:00:00

  • Robust principal component analysis-based four-dimensional computed tomography.

    abstract::The purpose of this paper for four-dimensional (4D) computed tomography (CT) is threefold. (1) A new spatiotemporal model is presented from the matrix perspective with the row dimension in space and the column dimension in time, namely the robust PCA (principal component analysis)-based 4D CT model. That is, instead o...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/56/11/002

    authors: Gao H,Cai JF,Shen Z,Zhao H

    更新日期:2011-06-07 00:00:00

  • Intraoperative evaluation of device placement in spine surgery using known-component 3D-2D image registration.

    abstract::Intraoperative x-ray radiography/fluoroscopy is commonly used to assess the placement of surgical devices in the operating room (e.g. spine pedicle screws), but qualitative interpretation can fail to reliably detect suboptimal delivery and/or breach of adjacent critical structures. We present a 3D-2D image registratio...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/1361-6560/aa62c5

    authors: Uneri A,De Silva T,Goerres J,Jacobson MW,Ketcha MD,Reaungamornrat S,Kleinszig G,Vogt S,Khanna AJ,Osgood GM,Wolinsky JP,Siewerdsen JH

    更新日期:2017-04-21 00:00:00

  • Analytical linear energy transfer model including secondary particles: calculations along the central axis of the proton pencil beam.

    abstract::In proton therapy, the relative biological effectiveness (RBE) depends on various types of parameters such as linear energy transfer (LET). An analytical model for LET calculation exists (Wilkens' model), but secondary particles are not included in this model. In the present study, we propose a correction factor, L se...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/61/2/740

    authors: Marsolat F,De Marzi L,Pouzoulet F,Mazal A

    更新日期:2016-01-21 00:00:00

  • A 4D biomechanical lung phantom for joint segmentation/registration evaluation.

    abstract::At present, there exists few openly available methods for evaluation of simultaneous segmentation and registration algorithms. These methods allow for a combination of both techniques to track the tumor in complex settings such as adaptive radiotherapy. We have produced a quality assurance platform for evaluating this...

    journal_title:Physics in medicine and biology

    pub_type: 杂志文章

    doi:10.1088/0031-9155/61/19/7012

    authors: Markel D,Levesque I,Larkin J,Léger P,El Naqa I

    更新日期:2016-10-07 00:00:00