Precise characterization of GlnR Box in actinomycetes.

Abstract:

:GlnR has been characterized as a central regulator governing most nitrogen metabolisms in many important actinomycetes. So far, the GlnR binding consensus sequences have been extensively studied, but with different motifs proposed, which has therefore brought confusion and impeded the understanding of the in-depth molecular mechanisms of GlnR-mediated transcriptional regulation. Here, a 30-nt GlnR-protected DNA sequence in the promoter of glnA in Amycolatopsis mediterranei was employed for precise characterization of GlnR binding consensus sequences. Site-by-site mutagenesis strategy combining with the Electrophoretic Mobility Shift Assay were employed, and a 5-nt GlnR Box was precisely defined as the basic unit for GlnR binding.

authors

Wang J,Wang Y,Zhao GP

doi

10.1016/j.bbrc.2015.02.010

subject

Has Abstract

pub_date

2015-03-13 00:00:00

pages

605-607

issue

3

eissn

0006-291X

issn

1090-2104

pii

S0006-291X(15)00224-7

journal_volume

458

pub_type

杂志文章
  • Cloning, nucleotide sequence and characterization of a New Zealand rabbit metallothionein-I gene.

    abstract::We have isolated a rabbit metallothionein-I gene from a lambda gt10 library. The coding sequence of this gene is interrupted by two introns occurring at amino acid positions 9 1/3 and 30 1/3. Comparison of the promoter sequence of this gene with the promoters of other metallothionein genes identified a number of oligo...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/s0006-291x(88)81210-5

    authors: Tam YC,Chopra A,Hassan M,Thirion JP

    更新日期:1988-05-31 00:00:00

  • Proteasome inhibition promotes mono-ubiquitination and nuclear translocation of mature (52 kDa) PINK1.

    abstract::Mutations of PTEN-induced kinase 1 (PINK1) cause recessive familial Parkinson's disease. Cells lacking PINK1 display mitochondrial deficits and increased sensitivity to oxidative and proteasomal stress. It has been shown that the 52-kDa (mature) form of PINK1 in the cytoplasm mitigates proteasomal stress-induced cell ...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2019.07.051

    authors: Sun L,Büeler H

    更新日期:2019-09-17 00:00:00

  • The fetal specific gene CYP3A7 is inducible by rifampicin in adult human hepatocytes in primary culture.

    abstract::We investigated by RNase protection the differential expression of CYP3A4 and CYP3A7 mRNAs in fetal and adult human livers and in adult hepatocytes in primary culture. Our results show that CYP3A7 is expressed in the liver of 8 of 9 adult Caucasians examined, at an average level of 1.7% of the level found in a fetal l...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1006/bbrc.1996.1231

    authors: Greuet J,Pichard L,Bonfils C,Domergue J,Maurel P

    更新日期:1996-08-14 00:00:00

  • Lanthionine introduction into nukacin ISK-1 prepeptide by co-expression with modification enzyme NukM in Escherichia coli.

    abstract::We demonstrated lanthionine introduction into hexa-histidine-tagged (His-tagged) nukacin ISK-1 prepeptide NukA by modification enzyme NukM in Escherichia coli. Co-expression of nukA and nukM, purification of the resulting His-tagged prepeptide by affinity chromatography, and subsequent mass spectrometry analysis showe...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2005.08.125

    authors: Nagao J,Harada Y,Shioya K,Aso Y,Zendo T,Nakayama J,Sonomoto K

    更新日期:2005-10-21 00:00:00

  • Antigen-induced chemokine activation in mouse buccal epithelium.

    abstract::The oral mucosa is an active though poorly understood immunological site. Using an experimental animal system involving antigen priming into the oral mucosa of transgenic mice expressing T cell receptor (TCR) for a peptide antigen of hen-egg lysozyme (HEL), the expression of six chemokine receptors and seven chemokine...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/s0006-291x(03)00533-3

    authors: Otten K,Dragoo J,Wang HC,Klein JR

    更新日期:2003-04-25 00:00:00

  • Increased gene expression and production of murine endothelin receptors after birth.

    abstract::We developed the real-time PCR quantification of endothelin-A (ET-A) and endothelin-B (ET-B) receptor genes and present their relative expression levels in various adult tissues and during development in mouse using the 2(-Delta Delta C(T)) method. ET-A and ET-B receptors were detected in all tissues examined. Gene ex...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/s0006-291x(03)00769-1

    authors: Adur J,Takizawa S,Quan J,Uchide T,Saida K

    更新日期:2003-06-06 00:00:00

  • The level of a transcription factor Sp1 is correlated with the expression of EGF receptor in human gastric carcinomas.

    abstract::The expression of the transcription factor Sp1 and EGF receptor (EGFR) was examined on human gastric carcinoma cell lines and gastric carcinoma tissues as well as corresponding normal mucosa in order to clarify the mechanism of overexpression of EGFR gene without gene amplification. All 7 carcinoma cell lines expresse...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/0006-291x(92)90221-6

    authors: Kitadai Y,Yasui W,Yokozaki H,Kuniyasu H,Haruma K,Kajiyama G,Tahara E

    更新日期:1992-12-30 00:00:00

  • Cellular prion protein in ovine milk.

    abstract::Cellular prion protein, PrP(C), is essential for the development of prion diseases where it is considered to be a substrate for the formation of the disease-associated conformer, PrP(Sc). In sheep, PrP(C) is abundant in neuronal tissue and is also found at lower concentrations in a range of non-neuronal tissues, inclu...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2006.12.006

    authors: Maddison BC,Whitelam GC,Gough KC

    更新日期:2007-02-02 00:00:00

  • A unique low frequency Raman band associated with metal binding to metallothionein.

    abstract::We find that the low frequency Raman spectrum of Zn(II) metallothionein has a single prominent band at 138 cm-1 which is absent from the Raman spectrum of the metal-free protein. This feature is also found for Cd(II) binding to both of the independent metallothionein domains and the metallothionein from Neurospora cra...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/0006-291x(89)92333-4

    authors: Elgren TE,Wilcox DE

    更新日期:1989-09-15 00:00:00

  • GOLGA2 loss causes fibrosis with autophagy in the mouse lung and liver.

    abstract::Autophagy is a biological recycling process via the self-digestion of organelles, proteins, and lipids for energy-consuming differentiation and homeostasis. The Golgi serves as a donor of the double-membraned phagophore for autophagosome assembly. In addition, recent studies have demonstrated that pulmonary and hepati...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2017.11.049

    authors: Park S,Kim S,Kim MJ,Hong Y,Lee AY,Lee H,Tran Q,Kim M,Cho H,Park J,Kim KP,Park J,Cho MH

    更新日期:2018-01-01 00:00:00

  • Apoptosis of mink lung epithelial cells by co-treatment of low-dose staurosporine and transforming growth factor-beta1 depends on the enhanced TGF-beta signaling and requires the decreased phosphorylation of PKB/Akt.

    abstract::We demonstrate how co-treatment of low-dose staurosporine (STS) and TGF-beta1, which alone have little effect on cell death, markedly induces apoptosis in Mv1Lu mink lung epithelial cells, but not in its clonal variant R1B cells lacking functional TGF-beta signaling. This process was associated with mitochondria-depen...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2005.01.078

    authors: Ju EM,Choi KC,Hong SH,Lee CH,Kim BC,Kim SJ,Kim IH,Park SH

    更新日期:2005-03-25 00:00:00

  • Arachidonic acid metabolites regulate interleukin-1 production.

    abstract::We have investigated the role of arachidonic acid metabolites in the regulation of interleukin-1 production by murine peritoneal macrophages. Indomethacin a potent inhibitor of prostaglandin synthesis caused a dose-dependent augmentation of lipopolysaccharide induced interleukin production (up to 7-fold at 5 microM). ...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/0006-291x(85)90130-5

    authors: Kunkel SL,Chensue SW

    更新日期:1985-04-30 00:00:00

  • Transcription factor WRKY30 mediates resistance to Cucumber mosaic virus in Arabidopsis.

    abstract::WRKY transcription factors are key regulators in regulating abiotic or biotic stress response in Arabidopsis. Previous studies showed that WRKY30 expression was induced by oxidative stress treatment, fungal elicitor, SA and ABA. However, functions of WRKY30 on viral defense are not well studied. Here, we found that Ar...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2019.07.030

    authors: Zou L,Yang F,Ma Y,Wu Q,Yi K,Zhang D

    更新日期:2019-09-10 00:00:00

  • Role of CXC chemokines in the enhancement of LPS-induced neutrophil accumulation in the lung of mice by dexamethasone.

    abstract::Lipopolysaccharide (LPS)-induced multiple organ injury was mediated in part by a transcription factor, nuclear factor-kappaB (NF-kappaB). Mice were pretreated with dexamethasone (DEX), an inhibitor of NF-kappaB activation, to elucidate its effects on LPS-induced early responses in vivo. Early responses measured 1 h af...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/S0006-291X(02)00573-9

    authors: Aoki K,Ishida Y,Kikuta N,Kawai H,Kuroiwa M,Sato H

    更新日期:2002-06-28 00:00:00

  • Does endothelin mobilize calcium from intracellular store sites in rat aortic vascular smooth muscle cells in primary culture?

    abstract::In the presence of endothelin, there was a rapid increase in the 45Ca++ efflux from primary cultured rat vascular smooth muscle cells, both in physiological salt solution and in calcium free medium containing 2 mM EGTA. The 45Ca++ influx was not affected. The endothelin-induced, transient increase in cytosolic calcium...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/s0006-291x(88)80841-6

    authors: Miasiro N,Yamamoto H,Kanaide H,Nakamura M

    更新日期:1988-10-14 00:00:00

  • Detection and analysis of the human D4 dopamine receptor gene (DRD4) sequence variant in the Japanese and Mongolian population.

    abstract::A PCR-based Sma I restriction fragment length polymorphism (RFLP) in the human D4 dopamine receptor (DRD4) gene was investigated in 200 subjects each of Japanese and Mongolian populations. When compared to allele frequencies for Caucasians previously reported by Petronis et al., Japanese and Mongolian populations show...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1006/bbrc.1996.0479

    authors: Nakatome M,Honda K,Tun Z,Wakasugi C

    更新日期:1996-03-27 00:00:00

  • Bone morphogenetic protein.

    abstract::Bone morphogenetic proteins (BMPs) are multi-functional growth factors belonging to the transforming growth factor-beta superfamily. It has been demonstrated that BMPs had been involved in the regulation of cell proliferation, survival, differentiation and apoptosis. However, their hallmark ability is that play a pivo...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章,评审

    doi:10.1016/j.bbrc.2007.08.045

    authors: Xiao YT,Xiang LX,Shao JZ

    更新日期:2007-10-26 00:00:00

  • Characterization of gamma S-crystallin isoforms from lip shark (Chiloscyllium colax): evolutionary comparison between gamma S and beta/gamma crystallins.

    abstract::gamma S-Crystallin from shark eye lenses, formerly termed beta s crystallin in mammalian lenses, is structurally characterized in this study by cDNA cloning and sequencing. To facilitate sequence characterization of gamma S-crystallin possessing intermediate structural properties between beta- and gamma-crystallins, c...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1006/bbrc.1997.7600

    authors: Pan FM,Chuang MH,Chiou SH

    更新日期:1997-11-07 00:00:00

  • Characterization of fibrillation process of alpha-synuclein at the initial stage.

    abstract::alpha-Synuclein is the major component of the filamentous Lewy bodies and Lewy-related neurites, neuropathological hallmarks of Parkinson's disease. Although numerous studies on alpha-synuclein fibrillation have been reported, the molecular mechanisms of aggregation and fibrillation at the initial stage are still uncl...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2008.02.127

    authors: Tashiro M,Kojima M,Kihara H,Kasai K,Kamiyoshihara T,Uéda K,Shimotakahara S

    更新日期:2008-05-09 00:00:00

  • Translocation of HSP27 to sarcomere induced by ischemic preconditioning in isolated rat hearts.

    abstract::We investigated the role of the 27-kDa heat shock protein (HSP27) in cardiac protection using Langendorff-perfused rat hearts. After preconditioning (a single episode of 5 min global ischemia followed by 5 min of reperfusion), HSP27 redistributed from the cytosol to the sarcomere and recovery of the contractile functi...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1006/bbrc.2000.2233

    authors: Sakamoto K,Urushidani T,Nagao T

    更新日期:2000-03-05 00:00:00

  • Mini-Review: Oxidative stress, redox stress or redox success?

    abstract::The first life forms evolved in a highly reducing environment. This reduced state is still carried by cells today, which makes the concept of "reductive stress" somewhat redundant. When oxygen became abundant on the Earth, due to the evolution of photosynthesis, life forms had to adapt or become extinct. Living organi...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章,评审

    doi:10.1016/j.bbrc.2018.05.045

    authors: Gutteridge JMC,Halliwell B

    更新日期:2018-07-12 00:00:00

  • Identification of miR-1 as a micro RNA that supports late-stage differentiation of growth cartilage cells.

    abstract::The process of endochondral ossification is strictly regulated by a variety of extracellular and intracellular factors. Recently, it has become recognized that specific miRNAs are involved in this process by regulating the expression of the relevant genes at the post-transcriptional level. In this present study we obt...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2010.10.016

    authors: Sumiyoshi K,Kubota S,Ohgawara T,Kawata K,Nishida T,Shimo T,Yamashiro T,Takigawa M

    更新日期:2010-11-12 00:00:00

  • Restrictase free generation of targeting vectors for disruption of complex mouse genes.

    abstract::Molecular cloning of targeting vectors (TgVs) is a prerequisite procedure for gene disruption in embryonic stem cells. In cases where target genes display complex features (e.g., gene overlap, alternative exon usage), TgVs must mediate deletions with very high precision to prevent unwanted effects. This is often diffi...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2007.04.131

    authors: Miazek A,Cebula A,Skwarek M,Cebrat M,Kisielow P

    更新日期:2007-06-29 00:00:00

  • Chondroitin sulfate E blocks enzymatic action of heparanase and heparanase-induced cellular responses.

    abstract::We examined whether chondroitin sulfates (CSs) exert inhibitory effects on heparanase (Hpse), the sole endoglycosidase that cleaves heparan sulfate (HS) and heparin, which also stimulates chemokine production. Hpse-mediated degradation of HS was suppressed in the presence of glycosaminoglycans derived from a squid car...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/j.bbrc.2019.09.126

    authors: Higashi N,Maeda R,Sesoko N,Isono M,Ishikawa S,Tani Y,Takahashi K,Oku T,Higashi K,Onishi S,Nakajima M,Irimura T

    更新日期:2019-11-26 00:00:00

  • Markedly decreased binding of vincristine to tubulin in vinca alkaloid-resistant Chinese hamster cells is associated with selective overexpression of alpha and beta tubulin isoforms.

    abstract::Vinca alkaloids are among a number of cytotoxic agents which target tumor cell microtubules. Studies described herein document the basis for one form of acquired resistance to these plant alkaloids involving an alteration of tubulin in a variant (DC-3F/VCRd-5L) of DC-3F Chinese hamster cells. Our results revealed a ma...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1006/bbrc.2000.2246

    authors: Sirotnak FM,Danenberg KD,Chen J,Fritz F,Danenberg PV

    更新日期:2000-03-05 00:00:00

  • Dexamethasone prevents the induction by endotoxin of a nitric oxide synthase and the associated effects on vascular tone: an insight into endotoxin shock.

    abstract::The relationship between vascular tone and the induction by endotoxin of a nitric oxide (NO) synthase was studied in vitro in rings of rat thoracic aorta. In rings with and without endothelium there was a time-dependent induction of NO synthase accompanied by both spontaneous and L-arginine-induced relaxation and by r...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/s0006-291x(05)80068-3

    authors: Rees DD,Cellek S,Palmer RM,Moncada S

    更新日期:1990-12-14 00:00:00

  • A putative sirolimus (rapamycin) effector protein.

    abstract::Sirolimus (rapamycin), a new immunosuppressive drug, inhibits proliferation of a wide spectrum of T and B cells. The immunosuppressive mechanism of sirolimus is still unclear. We recently isolated a membrane associated protein with an apparent molecular weight of 210 kDa, p210, from cultured Molt 4 cells and BJAB cell...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1006/bbrc.1994.2140

    authors: Chen Y,Chen H,Rhoad AE,Warner L,Caggiano TJ,Failli A,Zhang H,Hsiao CL,Nakanishi K,Molnar-Kimber KL

    更新日期:1994-08-30 00:00:00

  • The nucleus of HeLa cell contains tubular structures for Ca2+ signalling.

    abstract::It has long been assumed that Ca2+ are translocated from the cytosol to the cell nucleus by a long distance to activate transcription machinery buried deep in the nucleoplasm. However, this model has been recently challenged. When HeLa cells were loaded with fluo-3, highly fluorescent spots of approximately 2 microns ...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1006/bbrc.1998.8649

    authors: Lui PP,Kong SK,Kwok TT,Lee CY

    更新日期:1998-06-09 00:00:00

  • The RB/E2F pathway and regulation of RNA processing.

    abstract::The retinoblastoma tumor suppressor protein (RB) is inactivated in a majority of cancers. RB restricts cell proliferation by inhibiting the E2F family of transcription factors. The current model for RB/E2F function describes its role in regulating transcription at gene promoters. Whether the RB or E2F proteins might p...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章,评审

    doi:10.1016/j.bbrc.2009.04.107

    authors: Ahlander J,Bosco G

    更新日期:2009-07-03 00:00:00

  • Acetylcholine blocks Ca++-induced closure of outward K+ currents in isolated patches of canine atrial myocyte sarcolemma.

    abstract::The patch clamp technique applied to canine atrial myocyte sarcolemma, showed that 2 types of K+ channels were differentially affected by Ach. The 2 channel types differed in conductance, responses to [Ca++], and sensitivity to membrane potential. Addition of Ach (10(-9) M to 10(-6) M) to pipette solutions increased o...

    journal_title:Biochemical and biophysical research communications

    pub_type: 杂志文章

    doi:10.1016/0006-291x(87)91519-1

    authors: Bubien JK,Woods WT Jr

    更新日期:1987-02-13 00:00:00