Emerging viruses in the genus Comovirus.

Abstract:

:The intraspecies variability of capsid proteins of five viruses of the genus Comovirus was established. Inclusion of both capsid proteins to the sequence analysis reduces some uncertainties about species/strains demarcation criteria in the Comovirus genus. New approach is proposed for discrimination of Turnip ringspot virus as a separate species.

journal_name

Virus Genes

journal_title

Virus genes

authors

Petrzik K,Koloniuk I

doi

10.1007/s11262-009-0443-1

subject

Has Abstract

pub_date

2010-04-01 00:00:00

pages

290-2

issue

2

eissn

0920-8569

issn

1572-994X

journal_volume

40

pub_type

杂志文章
  • Complete genome analysis of velogenic Newcastle disease virus reference strain "Chimalhuacan": evolution of viral lineages in Mexico.

    abstract::Newcastle disease virus with velogenic characteristics circulates in the poultry industry in Mexico and various other American countries. In Mexico, vaccine efficacy testing to obtain commercial registration is reliant on a challenge with a velogenic strain known colloquially as Chimalhuacan due to the site where it w...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-014-1082-8

    authors: Absalón AE,Mariano-Matías A,García LJ,Morales-Garzón A,Toscano-Contreras A,Lucio-Decanini E,Cortés-Espinosa DV

    更新日期:2014-10-01 00:00:00

  • Full genome sequence of a Sathuvachari virus strain isolated in the southwestern-most archipelago of Japan.

    abstract::Two virus strains, tentatively designated as ON-6/P/05 and ON-7/E/05, were isolated from blood samples of healthy cattle in the Yaeyama Islands, located in the southwestern-most region of Japan, in 2005. Ultrastructural observations of infected baby hamster (BHK-21) cells revealed that the viruses had features consist...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-018-1592-x

    authors: Kato T,Aizawa M,Takayoshi K,Yanase T,Tanaka S,Shirafuji H,Yamakawa M

    更新日期:2018-10-01 00:00:00

  • Simultaneous analysis of the bidirectional African cassava mosaic virus promoter activity using two different luciferase genes.

    abstract::The expression of geminivirus genes is controlled by bidirectional promoters which are located in the large intergenic region of the circular DNA genomes and specifically regulated by virus encoded proteins. In order to study the simultaneous regulation of both orientations of the DNA A and DNA B promoters of African ...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1008183827072

    authors: Frey PM,Schärer-Hernández NG,Fütterer J,Potrykus I,Puonti-Kaerlas J

    更新日期:2001-03-01 00:00:00

  • Analysis of the biological and molecular variability of Watermelon mosaic virus isolates from Iran.

    abstract::Watermelon mosaic virus (WMV) is one of the most important viruses that causes different symptoms in Cucurbitaceae. WMV is a potyvirus with a worldwide distribution, but occurs most commonly in temperate and Mediterranean regions. Cucurbit species grown in Yazd, Esfahan, West Azerbaijan, Hormozgan, and Kerman province...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-008-0271-8

    authors: Sharifi M,Massumi H,Heydarnejad J,Hosseini Pour A,Shaabanian M,Rahimian H

    更新日期:2008-12-01 00:00:00

  • Detection and complete genome characteristics of Posavirus 1 from pigs in China.

    abstract::Porcine stool-associated RNA virus 1 (Posavirus 1) is a novel member of picornaviruses and first identified from fecal samples of 30-day-old pigs with diarrhea in USA in 2011. To evaluate the existence of Posavirus 1 in swine herds, 118 clinical samples from diarrheal pigs and 31 fecal swabs from healthy pigs were col...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-017-1512-5

    authors: Chen J,Lu M,Ma T,Cao L,Zhu X,Zhang X,Shi D,Shi H,Liu J,Feng L

    更新日期:2018-02-01 00:00:00

  • The genome of phiAsp2, an actinoplanes infecting phage.

    abstract::The first genome of a virus infecting a representative of the eubacterial genus Actinoplanes is presented. Phage phiAsp2 has a circularly permutated chromosome that consists of 58,638 bp; its G/C-bias of 70.39% resembles the hosts G + C-content (71-73% within the genus). A total of 76 open reading frames (orfs) were i...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/B:VIRU.0000032795.17713.6c

    authors: Jarling M,Bartkowiak K,Pape H,Meinhardt F

    更新日期:2004-08-01 00:00:00

  • Detection and genetic characterization of porcine pegivirus from pigs in China.

    abstract::Porcine pegiviruses (PPgV) have been first discovered in serum samples from domestic pigs in Germany in 2016 and then in the USA in 2018. To date, there is no documentation with respect to the presence of PPgVs in domestic pigs in China. Herein, we attempted to determine the presence and prevalence of PPgV in China an...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-018-1624-6

    authors: Lei D,Ye Y,Lin K,Zhang F,Huang D,Li K,Yuan W,Wu Q,Ding Z,Wang L,Song D,Tang Y

    更新日期:2019-04-01 00:00:00

  • Mal de Río Cuarto virus (MRCV) genomic segment S3 codes for the major core capsid protein.

    abstract::Mal de Río Cuarto virus (MRCV) is a newly described species of the genus Fijivirus, family Reoviridae. Compared with other plant-infecting genus of the family, the function and localization of MRCV and other Fijivirus proteins are poorly understood. Through analysis of viral particle purifications, we positively ident...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-009-0345-2

    authors: Distéfano AJ,Maldonado S,Hopp HE,del Vas M

    更新日期:2009-06-01 00:00:00

  • Insights into Jumonji C-domain containing protein 6 (JMJD6): a multifactorial role in foot-and-mouth disease virus replication in cells.

    abstract::The Jumonji C-domain containing protein 6 (JMJD6) has had a convoluted history, and recent reports indicating a multifactorial role in foot-and-mouth disease virus (FMDV) infection have further complicated the functionality of this protein. It was first identified as the phosphatidylserine receptor on the cell surface...

    journal_title:Virus genes

    pub_type: 杂志文章,评审

    doi:10.1007/s11262-017-1449-8

    authors: Lawrence P,Rieder E

    更新日期:2017-06-01 00:00:00

  • Nucleotide sequencing and serologic analysis of Cache Valley virus isolates from the Yucatan Peninsula of Mexico.

    abstract::Nucleotide sequencing was performed on part of the medium and large genome segments of 17 Cache Valley virus (CVV) isolates from the Yucatan Peninsula of Mexico. Alignment of these sequences to all other sequences in the Genbank database revealed that they have greatest nucleotide identity (97-98 %) with the equivalen...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-012-0741-x

    authors: Blitvich BJ,Loroño-Pino MA,Garcia-Rejon JE,Farfan-Ale JA,Dorman KS

    更新日期:2012-08-01 00:00:00

  • Orf virus (ORFV) ANK-1 protein mitochondrial localization is mediated by ankyrin repeat motifs.

    abstract::Orf virus (ORFV) strain D1701-V, a Parapoxvirus belonging to the family Poxviridae, became attractive as a novel virus vector system that we successfully used for the generation of recombinant vaccines. Therefore, the identification of viral genes involved in host tropisms or immune modulation is of great interest, as...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-014-1069-5

    authors: Lacek K,Bauer B,Bieńkowska-Szewczyk K,Rziha HJ

    更新日期:2014-08-01 00:00:00

  • Detection, differentiation and phylogenetic analysis of cucumber mosaic virus isolates from cucurbits in the northwest region of Iran.

    abstract::One hundred and twenty three cucurbit samples with one or more symptoms of leaf mosaic, leaf distortion, fruit mosaic, stunting, mottling and yellowing were collected from several locations in the northwest region of Iran. Screening by double-antibody sandwich enzyme-linked immunosorbent assay (DAS-ELISA) with a cucum...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-005-6912-2

    authors: Bashir NS,Kalhor MR,Zarghani SN

    更新日期:2006-06-01 00:00:00

  • Analysis of codon usage in Newcastle disease virus.

    abstract::In this study, the relative synonymous codon usage (RSCU) values, effective number of codon (ENC) values, nucleotide contents, and dinucleotide were used to investigate codon usage pattern of each protein-coding gene and genome among 31 Newcastle disease virus (NDV) isolates. The result shows that the overall extent o...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-011-0574-z

    authors: Wang M,Liu YS,Zhou JH,Chen HT,Ma LN,Ding YZ,Liu WQ,Gu YX,Zhang J

    更新日期:2011-04-01 00:00:00

  • Identification and characterization of a novel Tritimovirus species isolated from wild Trisetum flavescens L., family Poaceae.

    abstract::Yellow oat-grass plants (Trisetum flavescens L.) with mild mosaic and pronounced dwarfing symptoms were observed at different locations in the Czech Republic. Electron microscope observations of symptomatic plants revealed the presence of filamentous particles and inclusion bodies characteristic of the family Potyviri...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-009-0373-y

    authors: Hassan M,Sirlova L,Jokes M,Vacke J

    更新日期:2009-08-01 00:00:00

  • A local strain of Paprika mild mottle virus breaks L3 resistance in peppers and is accelerated in Tomato brown rugose fruit virus-infected Tm-22-resistant tomatoes.

    abstract::During October 2014, unfamiliar mild mosaic and mottling symptoms were identified on leaves of pepper (Capsicum chinense cv. Habanero) seedlings grown in the Arava valley in Israel 2-3 weeks post planting. Symptomatic plants were tested positive by ELISA using laboratory-produced antisera for tobamovirus species. Typi...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-018-1539-2

    authors: Luria N,Smith E,Sela N,Lachman O,Bekelman I,Koren A,Dombrovsky A

    更新日期:2018-04-01 00:00:00

  • Complete nucleotide sequence of Nootka lupine vein-clearing virus.

    abstract::The complete genome sequence of Nootka lupine vein-clearing virus (NLVCV) was determined to be 4,172 nucleotides in length containing four open reading frames (ORFs) with a similar genetic organization of virus species in the genus Carmovirus, family Tombusviridae. The order and gene product size, starting from the 5'...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-007-0139-3

    authors: Robertson NL,Côté F,Paré C,Leblanc E,Bergeron MG,Leclerc D

    更新日期:2007-12-01 00:00:00

  • Comparative analysis of the granulin regions of the Phthorimaea operculella and Spodoptera littoralis granuloviruses.

    abstract::The nucleotide sequence of two cloned restriction fragments encompassing the granulin genes from the granuloviruses of the potato tuber moth, Phthorimaea operculella, PhopGV, and the Egyptian cotton leaf worm, Spodoptera littoralis, SpliGV, have been determined. Although both viruses are able to infect the same Ph. op...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1008179228236

    authors: Taha A,Nour-El-Din A,Croizier L,Ferber ML,Croizier G

    更新日期:2000-10-01 00:00:00

  • Genetic characterization of an isolate of canine distemper virus from a Tibetan Mastiff in China.

    abstract::Canine distemper (CD) is a highly contagious, often fatal, multisystemic, and incurable disease in dogs and other carnivores, which is caused by canine distemper virus (CDV). Although vaccines have been used as the principal means of controlling the disease, CD has been reported in vaccinated animals. The hemoagglutin...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-014-1062-z

    authors: Li W,Li T,Liu Y,Gao Y,Yang S,Feng N,Sun H,Wang S,Wang L,Bu Z,Xia X

    更新日期:2014-08-01 00:00:00

  • Evolution of surface and nonstructural-1 genes of influenza B viruses isolated in the Province of Québec, Canada, during the 1998-2001 period.

    abstract::After 2 minor winter seasons, influenza B viruses were predominantly isolated in the Province of Quebec, Canada, during the 2000-2001 season representing 74% of laboratory-confirmed influenza viruses. We performed an antigenic study of the hemagglutinin (HA) protein and a molecular characterization of the HA1 region, ...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1025768308631

    authors: Abed Y,Coulthart MB,Li Y,Boivin G

    更新日期:2003-10-01 00:00:00

  • The VP3 gene of human group C rotavirus.

    abstract::The complete nucleotide sequence of genome segment 4 from the human group C rotavirus (Bristol strain) was determined. Comparison of the nucleotide sequences of the genome termini with the consensus 5' and 3' terminal non-coding sequences of the human group C rotavirus genome revealed characteristic 5' and 3' sequence...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF00568909

    authors: Samarbaf-Zadeh AR,Lambden PR,Green SM,Deng Y,Caul EO,Clarke IN

    更新日期:1996-01-01 00:00:00

  • Adaptation of wild-type measles virus to cotton rat lung cells: E89K mutation in matrix protein contributes to its fitness.

    abstract::Wild-type measles virus (wtMeV) adapted well to cotton rat lung (CRL) cells after serial passages. In order to evaluate the contributions of the individual genes of wtMeV for adaptation, whole genome sequences of the adapted and original viruses were determined and analyzed. The results showed that there were two muta...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-009-0408-4

    authors: Dong JB,Saito A,Mine Y,Sakuraba Y,Nibe K,Goto Y,Komase K,Nakayama T,Miyata H,Iwata H,Haga T

    更新日期:2009-12-01 00:00:00

  • Sequence of Echinochloa hoja blanca tenuivirus RNA-4.

    abstract::The sequence is presented of RNA-4 of Echinochloa hoja blanca tenuivirus (EHBV), one of two tenuiviruses associated with rice cultivation in Latin America (together with rice hoja blanca virus; RHBV). Analysis of the sequence shows that the coding regions of EHBV RNA-4 are closely related to those of RHBV RNA-4. Howev...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF00576979

    authors: de Miranda JR,Muñoz M,Wu R,Espinoza AM

    更新日期:1996-01-01 00:00:00

  • Origin and evolution of viroids and viroid-like satellite RNAs.

    abstract::Viroids, the smallest and simplest agents of infectious disease, cause a number of economically important diseases of crop plants. Present evidence indicates that most of these diseases originated recently (in the 20th century) by chance transfer of viroids from endemically infected wild plants or by use of viroid-inf...

    journal_title:Virus genes

    pub_type: 杂志文章,评审

    doi:10.1007/BF01728653

    authors: Diener TO

    更新日期:1995-01-01 00:00:00

  • Nine new RNA viruses associated with the fire ant Solenopsis invicta from its native range.

    abstract::The red imported fire ant (Solenopsis invicta) escaped its natural enemies when it was introduced into North America in the 1930s from South America. US efforts have focused on discovery of natural enemies, like viruses, to provide sustainable control of the ant. Nine new virus genomes were sequenced from the invasive...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-019-01652-4

    authors: Valles SM,Rivers AR

    更新日期:2019-06-01 00:00:00

  • Transcriptional suppression of IE180 and TK promoters by the EP0 of pseudorabies virus strains Ea and Fa.

    abstract::In our transient expression assays, the IE180 and TK promoters were markedly suppressed by the EP0 of the pseudorabies virus strains Ea and Fa (EP0/Ea, EP0/Fa). This is in contrast with the transactivating activity of EP0 from strain YS-81 (EP0/YS-81) in previous studies. Amino acid sequence alignment revealed several...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-008-0320-3

    authors: Guo H,Zhou R,Xi Y,Xiao S,Chen H

    更新日期:2009-04-01 00:00:00

  • Genetic characterization of Thai swine influenza viruses after the introduction of pandemic H1N1 2009.

    abstract::Pandemic H1N1 2009 (pH1N1), influenza virus containing triple reassortant internal genes (TRIG) from avian, human, and swine influenza viruses emerged in 2009 as a highly infectious virus that was able to be transmitted from humans to pigs. During June 2010-May 2012, influenza virus surveillance was conducted in Thai ...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-013-0927-x

    authors: Charoenvisal N,Keawcharoen J,Sreta D,Chaiyawong S,Nonthabenjawan N,Tantawet S,Jittimanee S,Arunorat J,Amonsin A,Thanawongnuwech R

    更新日期:2013-08-01 00:00:00

  • Human T-cell leukemia virus type 1 Tax induces an aberrant clustering of the tumor suppressor Scribble through the PDZ domain-binding motif dependent and independent interaction.

    abstract::Human T-cell leukemia virus type 1 (HTLV-1) is a causative agent of adult T-cell leukemia. HTLV-1 Tax1 transforming protein interacts with several PDZ domain-containing proteins, and the interaction is associated with the transforming activities of Tax1 as well as persistent HTLV-1 infection. In this study, we show th...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-008-0259-4

    authors: Okajima M,Takahashi M,Higuchi M,Ohsawa T,Yoshida S,Yoshida Y,Oie M,Tanaka Y,Gejyo F,Fujii M

    更新日期:2008-10-01 00:00:00

  • Heptad-repeat sequences in the glycoprotein of rhabdoviruses.

    abstract::Two or three regions containing three or more successive newly defined heptads of a-d hydrophobic amino acid repeats have been located in the cDNA-derived amino acid sequences of glycoprotein G of all rhabdoviruses examined (rabies, vesicular stomatitis, fish, and plant rhabdoviruses) by computer search. These new hep...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF01702591

    authors: Coll JM

    更新日期:1995-01-01 00:00:00

  • Sequence of rice hoja blanca tenuivirus RNA-2.

    abstract::The sequence of rice hoja blanca tenuivirus RNA-2 is analysed and compared to its counter-part in rice stripe tenuivirus. The RNA encodes two proteins, in an ambisense arrangement. The 94 kD pc2, located in the complementary sense RNA, has several features typical of viral membrane (glyco)proteins, and also has region...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF00284643

    authors: De Miranda JR,Muñoz M,Wu R,Hull R,Espinoza AM

    更新日期:1996-01-01 00:00:00

  • Clustering of Argentinean tospoviruses with existing species in the genus by sequence analysis of a 450-nucleotide RNA region of the N gene.

    abstract::The genomic diversity of Argentine Tospoviruses from different geographical areas, and from several distinct crops was analysed here. For each isolate, RT-PCR, cloning and sequencing of a 450 nt fragment of the N gene were performed. Comparisons of RNA and predicted amino acid sequence identity and similarity were mad...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/BF00366986

    authors: Dewey R,Semorille L,Crisci J,Grau O

    更新日期:1996-01-01 00:00:00