Sequence of Echinochloa hoja blanca tenuivirus RNA-4.

Abstract:

:The sequence is presented of RNA-4 of Echinochloa hoja blanca tenuivirus (EHBV), one of two tenuiviruses associated with rice cultivation in Latin America (together with rice hoja blanca virus; RHBV). Analysis of the sequence shows that the coding regions of EHBV RNA-4 are closely related to those of RHBV RNA-4. However, the intergenic region separating the two ambisense open reading frames, are highly distinct for the two viruses. The features of the RNA and the comparisons with the sequences of RNA-4 of RHBV, rice stripe virus (RStV) and maize stripe virus (MStV) are discussed.

journal_name

Virus Genes

journal_title

Virus genes

authors

de Miranda JR,Muñoz M,Wu R,Espinoza AM

doi

10.1007/BF00576979

subject

Has Abstract

pub_date

1996-01-01 00:00:00

pages

61-4

issue

1

eissn

0920-8569

issn

1572-994X

journal_volume

13

pub_type

杂志文章
  • Sequence analysis of porcine adenovirus serotype 5 fibre gene: evidence for recombination.

    abstract::The nucleic acid and deduced amino acid sequence of the fibre gene of the HNF-61 strain of porcine adenovirus serotype 5 (PAdV-5) was determined and compared to that of the HNF-70 strain of the same serotype (Nagy et al., J Gen Virol 82, 525-529, 2001) and also to adenovirus fibre genes from the genera Mastadenovirus ...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1014580802250

    authors: Nagy M,Nagy E,Tuboly T

    更新日期:2002-03-01 00:00:00

  • Genetic structure of Pacific Flyway avian influenza viruses is shaped by geographic location, host species, and sampling period.

    abstract::The eight gene segments of avian influenza virus (AIV) reassort frequently and rapidly to generate novel genotypes and subtypes that are transmissible to a broad range of hosts. There is evidence that AIV can have a restricted host range and can segregate in space and time. Host-virus relationships at the species, geo...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-011-0706-5

    authors: Girard YA,Runstadler JA,Aldehoff F,Boyce W

    更新日期:2012-06-01 00:00:00

  • Interactions of porcine circovirus 2 with its hosts.

    abstract::Porcine circovirus 2 (PCV2) can cause porcine circovirus diseases and porcine circovirus-associated diseases (PCVD/PCVAD), which are widely presented in swine-producing countries. Since the discovery of this virus, considerable efforts have been devoted to understanding this pathogen and its interactions with its host...

    journal_title:Virus genes

    pub_type: 杂志文章,评审

    doi:10.1007/s11262-016-1326-x

    authors: Ren L,Chen X,Ouyang H

    更新日期:2016-08-01 00:00:00

  • Phylogenetic analysis of hop and grapevine isolates of hop stunt viroid supports a grapevine origin for hop stunt disease.

    abstract::We have examined sequence variability among nine isolates of hop stunt viroid (HSVd) collected from hop gardens in Tohoku district in Japan, the only area in the world where hop stunt disease is endemic. Six different consensus and one-consensus sequences as well as 12 sequence variants were detected in the nine HSVd-...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1008182302704

    authors: Sano T,Mimura R,Ohshima K

    更新日期:2001-01-01 00:00:00

  • Identification of a new Bombyx mori nucleopolyhedrovirus and analysis of its bro gene family.

    abstract::The highly pathogenic Bombyx mori nucleopolyhedrovirus (BmNPV) has caused severe damages to sericulture in many countries, and the relationship between the pathogenicity of various BmNPV strains and their geographical evolution has been the topic of our interest. In this study, we isolated a new BmNPV strain from Thai...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-012-0721-1

    authors: Zhou JB,Li XQ,De-Eknamkul W,Suraporn S,Xu JP

    更新日期:2012-06-01 00:00:00

  • The close genetic relationship of lineage D Betacoronavirus from Nigerian and Kenyan straw-colored fruit bats (Eidolon helvum) is consistent with the existence of a single epidemiological unit across sub-Saharan Africa.

    abstract::Straw-colored fruit bats (Eidolon helvum), which have been identified as natural hosts for several zoonotic pathogens, such as lyssaviruses, henipaviruses, and ebolavirus, are associated with human settlements in Nigeria where they are commonly consumed as a delicacy. However, information on the viruses harbored by th...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-016-1331-0

    authors: Leopardi S,Oluwayelu D,Meseko C,Marciano S,Tassoni L,Bakarey S,Monne I,Cattoli G,De Benedictis P

    更新日期:2016-08-01 00:00:00

  • Characterization of an insect-specific flavivirus (OCFVPT) co-isolated from Ochlerotatus caspius collected in southern Portugal along with a putative new Negev-like virus.

    abstract::We describe the isolation and characterization of an insect-specific flavivirus (ISF) from Ochlerotatus caspius (Pallas, 1771) mosquitoes collected in southern Portugal. The RNA genome of this virus, tentatively designated OCFVPT, for O. caspius flavivirus from Portugal, encodes a polyprotein showing all the features ...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-013-0960-9

    authors: Ferreira DD,Cook S,Lopes Â,de Matos AP,Esteves A,Abecasis A,de Almeida AP,Piedade J,Parreira R

    更新日期:2013-12-01 00:00:00

  • Sequence determination and molecular analysis of two strains of bovine parainfluenza virus type 3 that are attenuated for primates.

    abstract::The Kansas/15626/84 (Ka) and Shipping Fever (SF) strains of bovine parainfluenza virus type 3 (BPIV3) replicate less efficiently than human PIV3 (HPIV3) in the upper and lower respiratory tract of rhesus monkeys, and BPIV3 Ka is also highly attenuated in humans and is in clinical trials as a candidate vaccine against ...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1008130917204

    authors: Bailly JE,McAuliffe JM,Skiadopoulos MH,Collins PL,Murphy BR

    更新日期:2000-01-01 00:00:00

  • Complete genomic characterization of a porcine reproductive and respiratory syndrome virus isolate in Xinjiang province of China.

    abstract::Porcine reproductive and respiratory syndrome (PRRS) is a swine disease of major economic importance that causes reproductive and respiratory problems in pigs. In the present study, one strain of porcine reproductive and respiratory syndrome virus (PRRSV) was isolated in Xinjiang province, Northwest China, designated ...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-014-1122-4

    authors: Xia J,Chen S,Huang J,Ma W,Du W,Yang X,Liu Y,Yan G

    更新日期:2015-02-01 00:00:00

  • Pigeon paramyxovirus type 1 variants with polybasic F protein cleavage site but strikingly different pathogenicity.

    abstract::Newcastle disease viruses (NDV) isolated from pigeons (pigeon paramyxovirus type 1; PPMV-1) are mostly of mesogenic pathotype and characterized by a polybasic amino acid sequence motif at the fusion protein (F) cleavage site. This feature also applies to isolate R75/98 from Germany. Its genome consists of 15,192 nucle...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-014-1111-7

    authors: Heiden S,Grund C,Höper D,Mettenleiter TC,Römer-Oberdörfer A

    更新日期:2014-12-01 00:00:00

  • Genetic diversity of Apodemus agrarius-borne hantaan virus in Korea.

    abstract::Hantaan (HTN) virus, the etiologic agent of clinically severe hemorrhagic fever with renal syndrome (HFRS), was first isolated in 1976 from lung tissues of striped field mice (Apodemus agrarius) captured in Songnae-ri, Kyungki-do, Korea. To clarify the genetic diversity and phylogenetic relationship among Korean strai...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1008199800011

    authors: Song JW,Baek LJ,Kim SH,Kho EY,Kim JH,Yanagihara R,Song KJ

    更新日期:2000-10-01 00:00:00

  • Loss of linkage disequilibrium and accelerated protein divergence in duplicated cytomegalovirus chemokine genes.

    abstract::Human CMV (hCMV) encodes several captured chemokine ligand and chemokine receptor genes that may play a role in immune evasion. The adjacent viral alpha-chemokine genes UL146 and UL147 appear to have duplicated subsequent to a recent gene capture event. Sequence data from multiple hCMV isolates suggest accelerated pro...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-005-2201-3

    authors: Arav-Boger R,Zong JC,Foster CB

    更新日期:2005-08-01 00:00:00

  • Assessment of HCV genotypes in Yunnan Province of Southwest China.

    abstract::Recently, we reported that the frequency of hepatitis C virus (HCV) genotypes and subtypes has rapidly changed among intravenous drug users (IDUs) in Yunnan Province over the last 5 years; this is especially true for subtype 6a which has increased in frequency from 5 to 15%. Here, we assessed 120 HCV-positive plasma s...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-016-1420-0

    authors: Li Q,Yao Y,Shen Y,Cao D,Li Y,Zhang S,Cun W,Sun M,Yu J,Shi L,Dong S

    更新日期:2017-04-01 00:00:00

  • Correction to: Molecular analysis of maize (Zea mays L.)-infecting mastreviruses in Ethiopia reveals marked diversity of virus genomes and a novel species.

    abstract::The original version of this article unfortunately contained errors in the "Results" section. ...

    journal_title:Virus genes

    pub_type: 已发布勘误

    doi:10.1007/s11262-019-01662-2

    authors: Guadie D,Tesfaye K,Knierim D,Winter S,Abraham A

    更新日期:2019-06-01 00:00:00

  • Full-length hepatitis B virus sequences from naïve patients with fluctuation of viral load during ADV monotherapy.

    abstract::The reasons for adefovir dipivoxil (ADV) treatment failures appear diverse. Few studies have reported full-length hepatitis B virus (HBV) genome in patients with ADV treatment failures. The patients were from a phase III clinical trial that investigated the antiviral response to ADV in China. Seven patients had increa...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-009-0429-z

    authors: Li Y,Zhu M,Guo Y,Chen W,Li G

    更新日期:2010-04-01 00:00:00

  • Genetic evolution of the H9N2 avian influenza virus in Korean poultry farms.

    abstract::We performed whole genome sequencing of 22 H9N2 avian influenza viruses (AIV) isolated from domestic laying hens on farms between 2005 and 2008, and compared the sequences with viruses previously reported in Asia. A previous study revealed that two antigenically distinct sublineages were established within the MS96 li...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-012-0737-6

    authors: Lee CH,Byun SH,Lee YJ,Mo IP

    更新日期:2012-08-01 00:00:00

  • Variation analysis of two cucumber mosaic viruses and their associated satellite RNAs from sugar beet in China.

    abstract::Two cucumber mosaic virus (CMV) isolates XJ1 and XJ2 were obtained from sugar beet showing yellow mosaic symptom in Shihezi, Xinjiang Uigur municipality of China. The coat protein gene of the two CMV isolates and their associated satellite RNAs were amplified by reverse transcriptase polymerase chain reaction (RT-PCR)...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-006-0068-6

    authors: Xi D,Lan L,Wang J,Xu W,Xiang B,Lin H

    更新日期:2006-12-01 00:00:00

  • Complete genome sequence of a sapovirus from a child in Zhejiang, China.

    abstract::Although Sapovirus (Caliciviridae) has been accepted as one of the causes of acute gastroenteritis worldwide, little is known about the genetic characteristics of the whole genome of sapoviruses in China, especially those that infect humans. Here we report the complete genome sequence of a sapovirus strain, Human/Zhej...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-016-1343-9

    authors: Zhou X,Sun Y,Shang X,Gao J,Zhao X,Shuai H,Zhang R,Zhang Y

    更新日期:2016-10-01 00:00:00

  • Comparative analysis of the granulin regions of the Phthorimaea operculella and Spodoptera littoralis granuloviruses.

    abstract::The nucleotide sequence of two cloned restriction fragments encompassing the granulin genes from the granuloviruses of the potato tuber moth, Phthorimaea operculella, PhopGV, and the Egyptian cotton leaf worm, Spodoptera littoralis, SpliGV, have been determined. Although both viruses are able to infect the same Ph. op...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1008179228236

    authors: Taha A,Nour-El-Din A,Croizier L,Ferber ML,Croizier G

    更新日期:2000-10-01 00:00:00

  • Characterization of white spot syndrome virus VP52B and its interaction with VP26.

    abstract::White spot syndrome virus (WSSV) is one of the major pathogens of cultured shrimp. Identification of envelope protein interactions has become a central issue for the understanding of WSSV assembly. In this paper, WSSV envelope protein VP52B was fused with GST-tag and expressed in Escherichia coli BL-21(DE3). Immunogol...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-014-1126-0

    authors: Lin F,Jie Z,Hou L,Li F,Yang F

    更新日期:2015-02-01 00:00:00

  • Complete genome sequence of a novel Plum pox virus strain W isolate determined by 454 pyrosequencing.

    abstract::The near-complete (99.7 %) genome sequence of a novel Russian Plum pox virus (PPV) isolate Pk, belonging to the strain Winona (W), has been determined by 454 pyrosequencing with the exception of the thirty-one 5'-terminal nucleotides. This region was amplified using 5'RACE kit and sequenced by the Sanger method. Genom...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-013-0946-7

    authors: Sheveleva A,Kudryavtseva A,Speranskaya A,Belenikin M,Melnikova N,Chirkov S

    更新日期:2013-10-01 00:00:00

  • Genetic characterization of a rare H12N3 avian influenza virus isolated from a green-winged teal in Japan.

    abstract::This study reports on the genetic characterization of an avian influenza virus, subtype H12N3, isolated from an Eurasian green-winged teal (Anas crecca) in Japan in 2009. The entire genome sequence of the isolate was analyzed, and phylogenetic analyses were conducted to characterize the evolutionary history of the iso...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-014-1162-9

    authors: Bui VN,Ogawa H,Hussein IT,Hill NJ,Trinh DQ,AboElkhair M,Sultan S,Ma E,Saito K,Watanabe Y,Runstadler JA,Imai K

    更新日期:2015-04-01 00:00:00

  • Artesunate, an anti-malarial drug, has a potential to inhibit HCV replication.

    abstract::Hepatitis C virus (HCV) infection is a major global health issue. Although the search for HCV treatments has resulted in great achievements, the current treatment methods have limitations, and new methods and drugs for hepatitis C treatment are still required. The aim of the present study was to investigate the effect...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-015-1285-7

    authors: Dai R,Xiao X,Peng F,Li M,Gong G

    更新日期:2016-02-01 00:00:00

  • Macropodid herpesvirus 1 encodes genes for both thymidylate synthase and ICP34.5.

    abstract::Macropodid herpesvirus 1 (MaHV-1) is an unclassified alphaherpesvirus linked with the fatal infections of kangaroos and other marsupials. During the characterisation of the internal repeat region of MaHV-1, an open reading frame (ORF) encoding for thymidylate synthase (TS) gene was identified and completely sequenced....

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1015396430131

    authors: Guliani S,Polkinghorne I,Smith GA,Young P,Mattick JS,Mahony TJ

    更新日期:2002-06-01 00:00:00

  • Identification and characterization of the UL24 gene product of herpes simplex virus type 2.

    abstract::The UL24 gene of herpes simplex virus type 2 (HSV-2) is predicted to encode a 281 amino acid protein with a molecular mass of 30.5 kDa. In this study, the HSV-2 UL24 gene product has been identified by using a rabbit polyclonal antiserum produced against a recombinant protein containing the full-length UL24 gene produ...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1011118424474

    authors: Hong-Yan Z,Murata T,Goshima F,Takakuwa H,Koshizuka T,Yamauchi Y,Nishiyama Y

    更新日期:2001-06-01 00:00:00

  • Evolution of feline immunodeficiency virus Gag proteins.

    abstract::We evaluated the predicted biochemical properties of Gag proteins from a diverse group of feline immunodeficiency viruses (FIV) to determine how different evolutionary histories of virus and host have changed or constrained these important structural proteins. Our data are based on FIV sequences derived from domestic ...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-006-0058-8

    authors: Burkala E,Poss M

    更新日期:2007-10-01 00:00:00

  • Chicken skin virome analyzed by high-throughput sequencing shows a composition highly different from human skin.

    abstract::Recent studies show that human skin at homeostasis is a complex ecosystem whose virome include circular DNA viruses, especially papillomaviruses and polyomaviruses. To determine the chicken skin virome in comparison with human skin virome, a chicken swabs pool sample from fifteen indoor healthy chickens of five geneti...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-015-1231-8

    authors: Denesvre C,Dumarest M,Rémy S,Gourichon D,Eloit M

    更新日期:2015-10-01 00:00:00

  • Establishment of mouse leukemia cell lines expressing human CD4/CCR5 using lentiviral vectors.

    abstract::A low-cost rodent model of HIV infection and which presents high application value is an effective tool to investigate HIV infection and pathogenesis. However, development of such a small animal model has been hampered by the unsuitability of rodent cells for HIV-1 replication given that the retrovirus HIV-1 has high ...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-016-1423-x

    authors: Li YJ,ZhuGe FY,Zeng CC,He JY,Tan N,Liang J

    更新日期:2017-04-01 00:00:00

  • Complete sequence of the RNA genome of pneumonia virus of mice (PVM).

    abstract::Pneumonia virus of mice (PVM) is an enveloped RNA-containing virus of Family Paramyxoviridae. Sequences had been determined previously for a number of PVM genes, although these represented cloned cDNAs rather than consensus sequences. Sequences were not available for the 3' -leader and 5' -trailer regions that constit...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1007/s11262-004-5631-4

    authors: Krempl CD,Lamirande EW,Collins PL

    更新日期:2005-03-01 00:00:00

  • Sequence comparison of avian infectious bronchitis virus S1 glycoproteins of the Florida serotype and five variant isolates from Georgia and California.

    abstract::The infectious bronchitis virus (IBV) spike glycoprotein S1 subunit is required to initiate infection and contains virus-neutralizing and serotype-specific epitope(s). Reported are the S1 gene nucleotide and predicted amino acid sequences for the Florida 18288 strain and isolates GA-92, CV-56b, CV-9437, CV-1686, and 1...

    journal_title:Virus genes

    pub_type: 杂志文章

    doi:10.1023/a:1008057118625

    authors: Moore KM,Bennett JD,Seal BS,Jackwood MW

    更新日期:1998-01-01 00:00:00