The acidic activator GAL4-AH can stimulate polymerase II transcription by promoting assembly of a closed complex requiring TFIID and TFIIA.

Abstract:

:The assembly of activated RNA polymerase II (pol II) transcription complexes has been investigated by assaying whether pre-assembly of intermediate complexes reduces the extended time required for start-site melting. The results show that a closed complex requiring factors IIA, IID, and the acidic activator GAL4-AH forms in a rate-limiting step. This directs the templates into a productive assembly pathway. Factor TFIIB is then added rapidly, affording further protection against diversion into nonproductive pathways. These events are followed by a series of rapid steps in which the remaining general factors are assembled onto the template, which is then melted using the energy of ATP hydrolysis.

journal_name

Genes Dev

journal_title

Genes & development

authors

Wang W,Gralla JD,Carey M

doi

10.1101/gad.6.9.1716

subject

Has Abstract

pub_date

1992-09-01 00:00:00

pages

1716-27

issue

9

eissn

0890-9369

issn

1549-5477

journal_volume

6

pub_type

杂志文章
  • Imp2 controls oxidative phosphorylation and is crucial for preserving glioblastoma cancer stem cells.

    abstract::Growth of numerous cancer types is believed to be driven by a subpopulation of poorly differentiated cells, often referred to as cancer stem cells (CSCs), that have the capacity for self-renewal, tumor initiation, and generation of nontumorigenic progeny. Despite their potentially key role in tumor establishment and m...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.188292.112

    authors: Janiszewska M,Suvà ML,Riggi N,Houtkooper RH,Auwerx J,Clément-Schatlo V,Radovanovic I,Rheinbay E,Provero P,Stamenkovic I

    更新日期:2012-09-01 00:00:00

  • Characterization of U4 and U6 interactions with the 5' splice site using a S. cerevisiae in vitro trans-splicing system.

    abstract::Spliceosome assembly has been characterized as the ordered association of the snRNP particles U1, U2, and U4/U6.U5 onto pre-mRNA. We have used an in vitro trans-splicing/cross-linking system in Saccharomyces cerevisiae nuclear extracts to examine the first step of this process, 5' splice site recognition. This trans-s...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.895601

    authors: Johnson TL,Abelson J

    更新日期:2001-08-01 00:00:00

  • TFIIIC determines RNA polymerase III specificity at the TATA-containing yeast U6 promoter.

    abstract::The gene encoding yeast U6 snRNA that is transcribed by RNA polymerase III (Pol III) contains both a TATA box upstream of the transcription start site and a downstream binding site for the factor TFIIIC. This juxtaposition of elements typical of both Pol II- and Pol III-transcribed genes raises the question of how pol...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.9.7.832

    authors: Roberts S,Colbert T,Hahn S

    更新日期:1995-04-01 00:00:00

  • The Neurospora circadian clock-controlled gene, ccg-2, is allelic to eas and encodes a fungal hydrophobin required for formation of the conidial rodlet layer.

    abstract::The Neurospora crassa clock-controlled gene (ccg-2) is transcriptionally activated by the circadian clock in a time-of-day-specific manner. Transcript and sequence analyses of ccg-2 reveal that the predicted Ccg-2 polypeptide bears significant similarity to a class of low-molecular-weight, cysteine-rich, hydrophobic p...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.6.12a.2382

    authors: Bell-Pedersen D,Dunlap JC,Loros JJ

    更新日期:1992-12-01 00:00:00

  • Breaking down bone: new insight into site-specific mechanisms of breast cancer osteolysis mediated by metalloproteinases.

    abstract::Bone metastases are the most common skeletal complication of malignancy. Tumor cells disrupt normal bone remodeling to promote bone destruction and its associated morbidity. In the August 15, 2009, issue of Genes & Development, Lu and colleagues (pp. 1882-1894) propose a novel molecular mechanism by which tumor-produc...

    journal_title:Genes & development

    pub_type: 评论,杂志文章

    doi:10.1101/gad.1854909

    authors: Guise TA

    更新日期:2009-09-15 00:00:00

  • Chk2/hCds1 functions as a DNA damage checkpoint in G(1) by stabilizing p53.

    abstract::Chk2/hcds1, the human homolog of the Saccharomyces cerevisiae RAD53/SPK1 and Schizosaccharomyces pombe cds1 DNA damage checkpoint genes, encodes a protein kinase that is post-translationally modified after DNA damage. Like its yeast homologs, the Chk2/hCds1 protein phosphorylates Cdc25C in vitro, suggesting that it ar...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:

    authors: Chehab NH,Malikzay A,Appel M,Halazonetis TD

    更新日期:2000-02-01 00:00:00

  • A thymus-specific member of the HMG protein family regulates the human T cell receptor C alpha enhancer.

    abstract::The human T cell-specific transcription factor TCF-1 alpha plays a key role in the tissue-specific activation of the T cell receptor (TCR) C alpha enhancer and binds to pyrimidine-rich elements (5'-PyCTTTG-3') present in a variety of other T cell-specific control regions. Using amino acid sequence information derived ...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.5.4.656

    authors: Waterman ML,Fischer WH,Jones KA

    更新日期:1991-04-01 00:00:00

  • Epigenetic effects on yeast transcription caused by mutations in an actin-related protein present in the nucleus.

    abstract::Gene inactivation can result when a delta element of the Ty1 transposon inserted into the yeast HIS4 promoter (his4-912delta) alters the transcription initiation site. Previous work has identified mutations that suppress this transcriptional defect by restoring the transcription start site to the native position, and ...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.10.5.604

    authors: Jiang YW,Stillman DJ

    更新日期:1996-03-01 00:00:00

  • Exon coconversion biases accompanying intron homing: battle of the nucleases.

    abstract::Intron homing in phage T4 occurs in the context of recombination-dependent replication, by virtue of intron-encoded endonucleolytic activity. After the td intron endonuclease I-TevI cleaves the intronless recipient 23 and 25 nucleotides upstream of the intron insertion site, exonucleolytic degradation is required for ...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.10.17.2158

    authors: Mueller JE,Smith D,Belfort M

    更新日期:1996-09-01 00:00:00

  • flbD encodes a Myb-like DNA-binding protein that coordinates initiation of Aspergillus nidulans conidiophore development.

    abstract::The timing of asexual fruiting body formation during Aspergillus nidulans colony development is precisely regulated so that conidiophores are typically produced 1-2 mm behind the growing edge of the colony. Mutations in any of four A. nidulans genes, flbB, flbC, flbD, or flbE, result in colonies that are delayed at le...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.9.4.491

    authors: Wieser J,Adams TH

    更新日期:1995-02-15 00:00:00

  • Physical and functional interactions between polo kinase and the spindle pole component Cut12 regulate mitotic commitment in S. pombe.

    abstract::Commitment to mitosis is regulated by a protein kinase complex called MPF. MPF is inhibited by Wee1-related kinases and activated by Cdc25 phosphatase. MPF activation further boosts Cdc25 and represses Wee1. This feedback control probably involves polo kinase. A dominant cut12.s11 mutation in the Schizosaccharomyces p...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.256003

    authors: MacIver FH,Tanaka K,Robertson AM,Hagan IM

    更新日期:2003-06-15 00:00:00

  • Cell surface proteins Nasrat and Polehole stabilize the Torso-like extracellular determinant in Drosophila oogenesis.

    abstract::Structural cell-surface and extracellular-matrix proteins modulate intercellular signaling events during development, but how this is achieved remains largely unknown. Here we identify a novel family of Drosophila proteins, Nasrat and Polehole, that coat the oocyte surface and play two roles: They mediate assembly of ...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.223902

    authors: Jiménez G,González-Reyes A,Casanova J

    更新日期:2002-04-15 00:00:00

  • Defects in lens fiber differentiation are linked to c-mos overexpression in transgenic mice.

    abstract::We describe three strains of transgenic mice derived by embryo microinjection of DNA consisting of a long terminal repeat (LTR) of Moloney murine sarcoma virus (Mo-MSV) linked to the murine c-mos coding sequences. Southern analysis of the genomic DNA of these strains suggested that in each case the transgene had integ...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1.10.1327

    authors: Khillan JS,Oskarsson MK,Propst F,Kuwabara T,Vande Woude GF,Westphal H

    更新日期:1987-12-01 00:00:00

  • The dishevelled protein is modified by wingless signaling in Drosophila.

    abstract::Wingless (Wg) is an important signaling molecule in the development of Drosophila, but little is known about its signal transduction pathway. Genetic evidence indicates that another segment polarity gene, dishevelled (dsh) is required for Wg signaling. We have recently developed a cell culture system for Wg protein ac...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.9.9.1087

    authors: Yanagawa S,van Leeuwen F,Wodarz A,Klingensmith J,Nusse R

    更新日期:1995-05-01 00:00:00

  • SUMO functions in constitutive transcription and during activation of inducible genes in yeast.

    abstract::Transcription factors represent one of the largest groups of proteins regulated by SUMO (small ubiquitin-like modifier) modification, and their sumoylation is usually associated with transcriptional repression. To investigate whether sumoylation plays a general role in regulating transcription in yeast, we determined ...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1917910

    authors: Rosonina E,Duncan SM,Manley JL

    更新日期:2010-06-15 00:00:00

  • Centriole distal appendages promote membrane docking, leading to cilia initiation.

    abstract::The distal appendages (DAPs) of centrioles have been proposed to anchor cilia to the plasma membrane, but their molecular composition, assembly, and exact function in ciliogenesis remain poorly understood. Using quantitative centrosome proteomics and superresolution microscopy, we identified five DAP components, inclu...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.207043.112

    authors: Tanos BE,Yang HJ,Soni R,Wang WJ,Macaluso FP,Asara JM,Tsou MF

    更新日期:2013-01-15 00:00:00

  • Mad2 prevents aneuploidy and premature proteolysis of cyclin B and securin during meiosis I in mouse oocytes.

    abstract::In mitosis, the spindle checkpoint protein Mad2 averts aneuploidy by delaying anaphase onset until chromosomes align. Here we show that depletion of Mad2 in meiosis I mouse oocytes induced an increased incidence of aneuploidy. Proteolysis of cyclin B and securin commenced earlier in Mad2-depleted oocytes, resulting in...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.328105

    authors: Homer HA,McDougall A,Levasseur M,Yallop K,Murdoch AP,Herbert M

    更新日期:2005-01-15 00:00:00

  • Cadherins in development: cell adhesion, sorting, and tissue morphogenesis.

    abstract::Tissue morphogenesis during development is dependent on activities of the cadherin family of cell-cell adhesion proteins that includes classical cadherins, protocadherins, and atypical cadherins (Fat, Dachsous, and Flamingo). The extracellular domain of cadherins contains characteristic repeats that regulate homophili...

    journal_title:Genes & development

    pub_type: 杂志文章,评审

    doi:10.1101/gad.1486806

    authors: Halbleib JM,Nelson WJ

    更新日期:2006-12-01 00:00:00

  • The cohesin complex and its roles in chromosome biology.

    abstract::Cohesin is a chromosome-associated multisubunit protein complex that is highly conserved in eukaryotes and has close homologs in bacteria. Cohesin mediates cohesion between replicated sister chromatids and is therefore essential for chromosome segregation in dividing cells. Cohesin is also required for efficient repai...

    journal_title:Genes & development

    pub_type: 杂志文章,评审

    doi:10.1101/gad.1724308

    authors: Peters JM,Tedeschi A,Schmitz J

    更新日期:2008-11-15 00:00:00

  • Transcriptional coactivators PGC-1alpha and PGC-lbeta control overlapping programs required for perinatal maturation of the heart.

    abstract::Oxidative tissues such as heart undergo a dramatic perinatal mitochondrial biogenesis to meet the high-energy demands after birth. PPARgamma coactivator-1 (PGC-1) alpha and beta have been implicated in the transcriptional control of cellular energy metabolism. Mice with combined deficiency of PGC-1alpha and PGC-1beta ...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1661708

    authors: Lai L,Leone TC,Zechner C,Schaeffer PJ,Kelly SM,Flanagan DP,Medeiros DM,Kovacs A,Kelly DP

    更新日期:2008-07-15 00:00:00

  • Precise destruction: an emerging picture of the APC.

    abstract::Cell cycle transitions are often accompanied by the degradation of regulatory molecules. Targeting proteins to the proteasome for degradation is accomplished by the covalent addition of ubiquitin chains. The specificity of this pathway is largely dictated by a set of enzymes called ubiquitin ligases (or E3s). The anap...

    journal_title:Genes & development

    pub_type: 杂志文章,评审

    doi:10.1101/gad.1478306

    authors: Thornton BR,Toczyski DP

    更新日期:2006-11-15 00:00:00

  • Sexual dimorphism in diverse metazoans is regulated by a novel class of intertwined zinc fingers.

    abstract::Sex determination is regulated by diverse pathways. Although upstream signals vary, a cysteine-rich DNA-binding domain (the DM motif) is conserved within downstream transcription factors of Drosophila melanogaster (Doublesex) and Caenorhabditis elegans (MAB-3). Vertebrate DM genes have likewise been identified and, re...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:

    authors: Zhu L,Wilken J,Phillips NB,Narendra U,Chan G,Stratton SM,Kent SB,Weiss MA

    更新日期:2000-07-15 00:00:00

  • The global transcriptional regulators, SSN6 and TUP1, play distinct roles in the establishment of a repressive chromatin structure.

    abstract::Repression of a-cell specific gene expression in yeast alpha cells requires MAT alpha 2 and MCM1, as well as two global repressors, SSN6 and TUP1. Previous studies demonstrated that nucleosomes positioned adjacent to the alpha 2/MCM1 operator in alpha cells directly contribute to repression. To investigate the possibi...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.8.12.1400

    authors: Cooper JP,Roth SY,Simpson RT

    更新日期:1994-06-15 00:00:00

  • Genome-wide chromatin footprinting reveals changes in replication origin architecture induced by pre-RC assembly.

    abstract::Start sites of DNA replication are marked by the origin recognition complex (ORC), which coordinates Mcm2-7 helicase loading to form the prereplicative complex (pre-RC). Although pre-RC assembly is well characterized in vitro, the process is poorly understood within the local chromatin environment surrounding replicat...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.247924.114

    authors: Belsky JA,MacAlpine HK,Lubelsky Y,Hartemink AJ,MacAlpine DM

    更新日期:2015-01-15 00:00:00

  • Error-free replicative bypass of (6-4) photoproducts by DNA polymerase zeta in mouse and human cells.

    abstract::The ultraviolet (UV)-induced (6-4) pyrimidine-pyrimidone photoproduct [(6-4) PP] confers a large structural distortion in DNA. Here we examine in human cells the roles of translesion synthesis (TLS) DNA polymerases (Pols) in promoting replication through a (6-4) TT photoproduct carried on a duplex plasmid where bidire...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1872810

    authors: Yoon JH,Prakash L,Prakash S

    更新日期:2010-01-15 00:00:00

  • ICP27 mediates HSV RNA export by shuttling through a leucine-rich nuclear export signal and binding viral intronless RNAs through an RGG motif.

    abstract::Infection of metazoan cells with some viruses alters the balance of cellular mRNA export to favor viral RNA export and to retain cellular transcripts in the nucleus. Here, evidence is presented to show that the herpes simplex virus 1 (HSV-1) essential regulatory protein ICP27, which inhibits host cell-splicing, result...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.12.6.868

    authors: Sandri-Goldin RM

    更新日期:1998-03-15 00:00:00

  • Aurora-A acts as a tumor suppressor and regulates self-renewal of Drosophila neuroblasts.

    abstract::The choice of self-renewal versus differentiation is a fundamental issue in stem cell and cancer biology. Neural progenitors of the Drosophila post-embryonic brain, larval neuroblasts (NBs), divide asymmetrically in a stem cell-like fashion to generate a self-renewing NB and a Ganglion Mother Cell (GMC), which divides...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1487506

    authors: Wang H,Somers GW,Bashirullah A,Heberlein U,Yu F,Chia W

    更新日期:2006-12-15 00:00:00

  • cAMP promotes pancreatic beta-cell survival via CREB-mediated induction of IRS2.

    abstract::The incretin hormone GLP1 promotes islet-cell survival via the second messenger cAMP. Here we show that mice deficient in the activity of CREB, caused by expression of a dominant-negative A-CREB transgene in pancreatic beta-cells, develop diabetes secondary to beta-cell apoptosis. Remarkably, A-CREB severely disrupted...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.1097103

    authors: Jhala US,Canettieri G,Screaton RA,Kulkarni RN,Krajewski S,Reed J,Walker J,Lin X,White M,Montminy M

    更新日期:2003-07-01 00:00:00

  • P-element-mediated enhancer detection: a versatile method to study development in Drosophila.

    abstract::We generated and characterized greater than 500 Drosophila strains that carry single copies of a novel P-element enhancer detector. In the majority of the strains, the beta-galactosidase reporter gene in the P-transposon responds to nearby transcriptional regulatory sequences in the genome. A remarkable diversity of s...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.3.9.1288

    authors: Bellen HJ,O'Kane CJ,Wilson C,Grossniklaus U,Pearson RK,Gehring WJ

    更新日期:1989-09-01 00:00:00

  • Localized surface activity of torso, a receptor tyrosine kinase, specifies terminal body pattern in Drosophila.

    abstract::The subdivision of the Drosophila body into distinct terminal and central domains depends on the torso (tor) protein, a putative receptor tyrosine kinase that is active at both ends of the early embryo. We show that the tor protein is uniformly expressed along the surface membrane of early embryos despite its localize...

    journal_title:Genes & development

    pub_type: 杂志文章

    doi:10.1101/gad.3.12b.2025

    authors: Casanova J,Struhl G

    更新日期:1989-12-01 00:00:00