Biochemical evidence for diverse strategies in the inner kinetochore.

Abstract:

:The kinetochore is a complex structure whose function is absolutely essential. Unlike the centromere, the kinetochore at first appeared remarkably well conserved from yeast to humans, especially the microtubule-binding outer kinetochore. However, recent efforts towards biochemical reconstitution of diverse kinetochores challenge the notion of a similarly conserved architecture for the constitutively centromere-associated network of the inner kinetochore. This review briefly summarizes the evidence from comparative genomics for interspecific variability in inner kinetochore composition and focuses on novel biochemical evidence indicating that even homologous inner kinetochore protein complexes are put to different uses in different organisms.

journal_name

Open Biol

journal_title

Open biology

authors

Hamilton GE,Davis TN

doi

10.1098/rsob.200284

subject

Has Abstract

pub_date

2020-11-01 00:00:00

pages

200284

issue

11

issn

2046-2441

journal_volume

10

pub_type

杂志文章
  • An miRNA fingerprint using neural-enriched extracellular vesicles from blood plasma: towards a biomarker for amyotrophic lateral sclerosis/motor neuron disease.

    abstract::Biomarkers for amyotrophic lateral sclerosis/motor neuron disease (ALS/MND) are currently not clinically available for disease diagnosis or analysis of disease progression. If identified, biomarkers could improve patient outcomes by enabling early intervention and assist in the determination of treatment efficacy. We ...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.200116

    authors: Banack SA,Dunlop RA,Cox PA

    更新日期:2020-06-01 00:00:00

  • The first cell-fate decision of mouse preimplantation embryo development: integrating cell position and polarity.

    abstract::During the first cell-fate decision of mouse preimplantation embryo development, a population of outer-residing polar cells is segregated from a second population of inner apolar cells to form two distinct cell lineages: the trophectoderm and the inner cell mass (ICM), respectively. Historically, two models have been ...

    journal_title:Open biology

    pub_type: 杂志文章,评审

    doi:10.1098/rsob.170210

    authors: Mihajlović AI,Bruce AW

    更新日期:2017-11-01 00:00:00

  • Proteome response at the edge of protein aggregation.

    abstract::Proteins adopt defined structures and are crucial to most cellular functions. Their misfolding and aggregation is associated with numerous degenerative human disorders such as type II diabetes, Huntington's or Alzheimer's diseases. Here, we aim to understand why cells promote the formation of protein foci. Comparison ...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.140221

    authors: Sanchez de Groot N,Gomes RA,Villar-Pique A,Babu MM,Coelho AV,Ventura S

    更新日期:2015-02-01 00:00:00

  • High-throughput dense reconstruction of cell lineages.

    abstract::The first meeting exclusively dedicated to the 'High-throughput dense reconstruction of cell lineages' took place at Janelia Research Campus (Howard Hughes Medical Institute) from 14 to 18 April 2019. Organized by Tzumin Lee, Connie Cepko, Jorge Garcia-Marques and Isabel Espinosa-Medina, this meeting echoed the recent...

    journal_title:Open biology

    pub_type: 共识发展会议,杂志文章

    doi:10.1098/rsob.190229

    authors: Espinosa-Medina I,Garcia-Marques J,Cepko C,Lee T

    更新日期:2019-12-01 00:00:00

  • Mutational analysis of dimeric linkers in peri- and cytoplasmic domains of histidine kinase DctB reveals their functional roles in signal transduction.

    abstract::Membrane-associated histidine kinases (HKs) in two-component systems respond to environmental stimuli by autophosphorylation and phospho-transfer. HK typically contains a periplasmic sensor domain that regulates the cytoplasmic kinase domain through a conserved cytoplasmic linker. How signal is transduced from the lig...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.140023

    authors: Liu J,Yang J,Wen J,Yang Y,Wei X,Zhang X,Wang YP

    更新日期:2014-06-01 00:00:00

  • Efficiency of RNA interference is improved by knockdown of dsRNA nucleases in tephritid fruit flies.

    abstract::RNA interference (RNAi) in insects is routinely used to ascertain gene function, but also has potential as a technology to control pest species. For some insects, such as beetles, ingestion of small quantities of double-stranded RNA (dsRNA) is able to knock down a targeted gene's expression. However, in other species,...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.190198

    authors: Tayler A,Heschuk D,Giesbrecht D,Park JY,Whyard S

    更新日期:2019-12-01 00:00:00

  • Biosynthesis and biology of mammalian GPI-anchored proteins.

    abstract::At least 150 human proteins are glycosylphosphatidylinositol-anchored proteins (GPI-APs). The protein moiety of GPI-APs lacking transmembrane domains is anchored to the plasma membrane with GPI covalently attached to the C-terminus. The GPI consists of the conserved core glycan, phosphatidylinositol and glycan side ch...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.190290

    authors: Kinoshita T

    更新日期:2020-03-01 00:00:00

  • Non-invasive prenatal diagnosis by massively parallel sequencing of maternal plasma DNA.

    abstract::The presence of foetal DNA in the plasma of pregnant women has opened up new possibilities for non-invasive prenatal diagnosis. The use of circulating foetal DNA for the non-invasive prenatal detection of foetal chromosomal aneuploidies is challenging as foetal DNA represents a minor fraction of maternal plasma DNA. I...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.120086

    authors: Lo YM

    更新日期:2012-06-01 00:00:00

  • Role of angiocrine signals in bone development, homeostasis and disease.

    abstract::Skeletal vasculature plays a central role in the maintenance of microenvironments for osteogenesis and haematopoiesis. In addition to supplying oxygen and nutrients, vasculature provides a number of inductive factors termed as angiocrine signals. Blood vessels drive recruitment of osteoblast precursors and bone format...

    journal_title:Open biology

    pub_type: 杂志文章,评审

    doi:10.1098/rsob.190144

    authors: Sivan U,De Angelis J,Kusumbe AP

    更新日期:2019-10-31 00:00:00

  • Plasticity within the αβ⁺CD4⁺ T-cell lineage: when, how and what for?

    abstract::Following thymic output, αβ⁺CD4⁺ T cells become activated in the periphery when they encounter peptide-major histocompatibility complex. A combination of cytokine and co-stimulatory signals instructs the differentiation of T cells into various lineages and subsequent expansion and contraction during an appropriate and...

    journal_title:Open biology

    pub_type: 杂志文章,评审

    doi:10.1098/rsob.120157

    authors: Coomes SM,Pelly VS,Wilson MS

    更新日期:2013-01-23 00:00:00

  • Rheb and mammalian target of rapamycin in mitochondrial homoeostasis.

    abstract::Mitochondrial dysfunction has been associated with various diseases, such as cancer, myopathies, neurodegeneration and obesity. Mitochondrial homoeostasis is achieved by mechanisms that adapt the number of mitochondria to that required for energy production and for the supply of metabolic intermediates necessary to su...

    journal_title:Open biology

    pub_type: 杂志文章,评审

    doi:10.1098/rsob.130185

    authors: Groenewoud MJ,Zwartkruis FJ

    更新日期:2013-12-18 00:00:00

  • Upregulation of PIR gene expression induced by human papillomavirus E6 and E7 in epithelial oral and cervical cells.

    abstract::The hallmark of high-risk human papillomavirus (HR-HPV)-related carcinogenesis is E6 and E7 oncogene overexpression. The aim of this work was to characterize epithelial oral and cervical cancer cells that express HR-HPV E6 and E7 oncoproteins. Transcriptomic assay using DNA microarrays revealed that PIR gene expressio...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.170111

    authors: Carrillo D,Muñoz JP,Huerta H,Leal G,Corvalán A,León O,Calaf GM,Urzúa U,Boccardo E,Tapia JC,Aguayo F

    更新日期:2017-11-01 00:00:00

  • Adult Drosophila muscle morphometry through microCT reveals dynamics during ageing.

    abstract::Indirect flight muscles (IFMs) in adult Drosophila provide the key power stroke for wing beating. They also serve as a valuable model for studying muscle development. An age-dependent decline in Drosophila free flight has been documented, but its relation to gross muscle structure has not yet been explored satisfactor...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.190087

    authors: Chaturvedi D,Prabhakar S,Aggarwal A,Atreya KB,VijayRaghavan K

    更新日期:2019-06-28 00:00:00

  • Understanding the mammalian TRAP complex function(s).

    abstract::In eukaryotic cells, about one-third of the synthesized proteins are translocated into the endoplasmic reticulum; they are membrane or lumen resident proteins and proteins direct to the Golgi apparatus. The co-translational translocation takes place through the heterotrimeric protein-conducting channel Sec61 which is ...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.190244

    authors: Russo A

    更新日期:2020-05-01 00:00:00

  • A vitamin B₁₂ transporter in Mycobacterium tuberculosis.

    abstract::Vitamin B₁₂-dependent enzymes function in core biochemical pathways in Mycobacterium tuberculosis, an obligate pathogen whose metabolism in vivo is poorly understood. Although M. tuberculosis can access vitamin B₁₂ in vitro, it is uncertain whether the organism is able to scavenge B₁₂ during host infection. This quest...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.120175

    authors: Gopinath K,Venclovas C,Ioerger TR,Sacchettini JC,McKinney JD,Mizrahi V,Warner DF

    更新日期:2013-02-13 00:00:00

  • Pigment-Dispersing Factor-expressing neurons convey circadian information in the honey bee brain.

    abstract::Pigment-Dispersing Factor (PDF) is an important neuropeptide in the brain circadian network of Drosophila and other insects, but its role in bees in which the circadian clock influences complex behaviour is not well understood. We combined high-resolution neuroanatomical characterizations, quantification of PDF levels...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.170224

    authors: Beer K,Kolbe E,Kahana NB,Yayon N,Weiss R,Menegazzi P,Bloch G,Helfrich-Förster C

    更新日期:2018-01-01 00:00:00

  • Targeting of Helicobacter pylori thymidylate synthase ThyX by non-mitotoxic hydroxy-naphthoquinones.

    abstract::ThyX is an essential thymidylate synthase that is mechanistically and structurally unrelated to the functionally analogous human enzyme, thus providing means for selective inhibition of bacterial growth. To identify novel compounds with anti-bacterial activity against the human pathogenic bacterium Helicobacter pylori...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.150015

    authors: Skouloubris S,Djaout K,Lamarre I,Lambry JC,Anger K,Briffotaux J,Liebl U,de Reuse H,Myllykallio H

    更新日期:2015-06-01 00:00:00

  • Phylogeny rather than ecology or lifestyle biases the construction of Escherichia coli-Shigella genetic exchange communities.

    abstract::Genetic material can be transmitted not only vertically from parent to offspring, but also laterally (horizontally) from one bacterial lineage to another. Lateral genetic transfer is non-uniform; biases in its nature or frequency construct communities of genetic exchange. These biases have been proposed to arise from ...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.120112

    authors: Skippington E,Ragan MA

    更新日期:2012-09-01 00:00:00

  • PINK1 deficiency in β-cells increases basal insulin secretion and improves glucose tolerance in mice.

    abstract::The Parkinson's disease (PD) gene, PARK6, encodes the PTEN-induced putative kinase 1 (PINK1) mitochondrial kinase, which provides protection against oxidative stress-induced apoptosis. Given the link between glucose metabolism, mitochondrial function and insulin secretion in β-cells, and the reported association of PD...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.140051

    authors: Deas E,Piipari K,Machhada A,Li A,Gutierrez-del-Arroyo A,Withers DJ,Wood NW,Abramov AY

    更新日期:2014-05-07 00:00:00

  • Global regulation of heterochromatin spreading by Leo1.

    abstract::Heterochromatin plays important roles in eukaryotic genome regulation. However, the repressive nature of heterochromatin combined with its propensity to self-propagate necessitates robust mechanisms to contain heterochromatin within defined boundaries and thus prevent silencing of expressed genes. Here we show that lo...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.150045

    authors: Verrier L,Taglini F,Barrales RR,Webb S,Urano T,Braun S,Bayne EH

    更新日期:2015-05-01 00:00:00

  • Structural and functional analysis of the solute-binding protein UspC from Mycobacterium tuberculosis that is specific for amino sugars.

    abstract::Mycobacterium tuberculosis (Mtb), the aetiological agent of tuberculosis, has evolved to scavenge nutrients from the confined environment of host macrophages with mycobacterial ATP-binding cassette (ABC) transporters playing a key role in nutrient acquisition. Mtb-UspC (Rv2318) is the solute-binding protein of the ess...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.160105

    authors: Fullam E,Prokes I,Fütterer K,Besra GS

    更新日期:2016-06-01 00:00:00

  • Trypanosoma cruzi amastigotes that persist in the colon during chronic stage murine infections have a reduced replication rate.

    abstract::Chronic Trypanosoma cruzi infections are typically lifelong, with small numbers of parasites surviving in restricted tissue sites, which include the gastrointestinal tract. There is considerable debate about the replicative status of these persistent parasites and whether there is a role for dormancy in long-term infe...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.200261

    authors: Ward AI,Olmo F,Atherton RL,Taylor MC,Kelly JM

    更新日期:2020-12-01 00:00:00

  • Molecular and functional characterization of somatostatin-type signalling in a deuterostome invertebrate.

    abstract::Somatostatin (SS) and allatostatin-C (ASTC) are structurally and evolutionarily related neuropeptides that act as inhibitory regulators of physiological processes in mammals and insects, respectively. Here, we report the first molecular and functional characterization of SS/ASTC-type signalling in a deuterostome inver...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.200172

    authors: Zhang Y,Yañez Guerra LA,Egertová M,Zampronio CG,Jones AM,Elphick MR

    更新日期:2020-09-01 00:00:00

  • Establishment and function of chromatin modification at enhancers.

    abstract::How a single genome can give rise to distinct cell types remains a fundamental question in biology. Mammals are able to specify and maintain hundreds of cell fates by selectively activating unique subsets of their genome. This is achieved, in part, by enhancers-genetic elements that can increase transcription of both ...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.200255

    authors: Tafessu A,Banaszynski LA

    更新日期:2020-10-01 00:00:00

  • Wnt signalling in the development of axon, dendrites and synapses.

    abstract::Wnts are a highly conserved family of secreted glycoproteins that play essential roles in the morphogenesis and body patterning during the development of metazoan species. In recent years, mounting evidence has revealed important functions of Wnt signalling in diverse aspects of neural development, including neuronal ...

    journal_title:Open biology

    pub_type: 杂志文章,评审

    doi:10.1098/rsob.180116

    authors: He CW,Liao CP,Pan CL

    更新日期:2018-10-03 00:00:00

  • A conditional mutant of the fatty acid synthase unveils unexpected cross talks in mycobacterial lipid metabolism.

    abstract::Unlike most bacteria, mycobacteria rely on the multi-domain enzyme eukaryote-like fatty acid synthase I (FAS I) to make fatty acids de novo. These metabolites are precursors of the biosynthesis of most of the lipids present both in the complex mycobacteria cell wall and in the storage lipids inside the cell. In order ...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.160277

    authors: Cabruja M,Mondino S,Tsai YT,Lara J,Gramajo H,Gago G

    更新日期:2017-02-01 00:00:00

  • Linear ubiquitin chains: enzymes, mechanisms and biology.

    abstract::Ubiquitination is a versatile post-translational modification that regulates a multitude of cellular processes. Its versatility is based on the ability of ubiquitin to form multiple types of polyubiquitin chains, which are recognized by specific ubiquitin receptors to induce the required cellular response. Linear ubiq...

    journal_title:Open biology

    pub_type: 杂志文章,评审

    doi:10.1098/rsob.170026

    authors: Rittinger K,Ikeda F

    更新日期:2017-04-01 00:00:00

  • ELKS active zone proteins as multitasking scaffolds for secretion.

    abstract::Synaptic vesicle exocytosis relies on the tethering of release ready vesicles close to voltage-gated Ca2+ channels and specific lipids at the future site of fusion. This enables rapid and efficient neurotransmitter secretion during presynaptic depolarization by an action potential. Extensive research has revealed that...

    journal_title:Open biology

    pub_type: 杂志文章,评审

    doi:10.1098/rsob.170258

    authors: Held RG,Kaeser PS

    更新日期:2018-02-01 00:00:00

  • Short linear motif acquisition, exon formation and alternative splicing determine a pathway to diversity for NCoR-family co-repressors.

    abstract::Vertebrate NCoR-family co-repressors play central roles in the timing of embryo and stem cell differentiation by repressing the activity of a range of transcription factors. They interact with nuclear receptors using short linear motifs (SLiMs) termed co-repressor for nuclear receptor (CoRNR) boxes. Here, we identify ...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.150063

    authors: Short S,Peterkin T,Guille M,Patient R,Sharpe C

    更新日期:2015-08-01 00:00:00

  • Atypical centrioles are present in Tribolium sperm.

    abstract::Typical centrioles are made of microtubules organized in ninefold symmetry. Most animal somatic cells have two centrioles for normal cell division and function. These centrioles originate from the zygote, but because the oocyte does not provide any centrioles, it is surprising that the zygotes of many animals are thou...

    journal_title:Open biology

    pub_type: 杂志文章

    doi:10.1098/rsob.160334

    authors: Fishman EL,Jo K,Ha A,Royfman R,Zinn A,Krishnamurthy M,Avidor-Reiss T

    更新日期:2017-03-01 00:00:00