Signaling in and out: long-noncoding RNAs in tumor hypoxia.

Abstract:

:Over the past few years, long non-coding RNAs (lncRNAs) are recognized as key regulators of gene expression at chromatin, transcriptional and posttranscriptional level with pivotal roles in various biological and pathological processes, including cancer. Hypoxia, a common feature of the tumor microenvironment, profoundly affects gene expression and is tightly associated with cancer progression. Upon tumor hypoxia, the central regulator HIF (hypoxia-inducible factor) is upregulated and orchestrates transcription reprogramming, contributing to aggressive phenotypes in numerous cancers. Not surprisingly, lncRNAs are also transcriptional targets of HIF and serve as effectors of hypoxia response. Indeed, the number of hypoxia-associated lncRNAs (HALs) identified has risen sharply, illustrating the expanding roles of lncRNAs in hypoxia signaling cascade and responses. Moreover, through extra-cellular vesicles, lncRNAs could transmit hypoxia responses between cancer cells and the associated microenvironment. Notably, the aberrantly expressed cellular or exosomal HALs can serve as potential prognostic markers and therapeutic targets. In this review, we provide an update of the current knowledge about the expression, involvement and potential clinical impact of lncRNAs in tumor hypoxia, with special focus on their unique molecular regulation of HIF cascade and hypoxia-induced malignant progression.

journal_name

J Biomed Sci

authors

Kuo TC,Kung HJ,Shih JW

doi

10.1186/s12929-020-00654-x

subject

Has Abstract

pub_date

2020-05-05 00:00:00

pages

59

issue

1

eissn

1021-7770

issn

1423-0127

pii

10.1186/s12929-020-00654-x

journal_volume

27

pub_type

杂志文章,评审
  • Engagement of ubiquitination and de-ubiquitination at rostral ventrolateral medulla in experimental brain death.

    abstract:BACKGROUND:Whereas brain death is a vitally important clinical phenomenon, our contemporary understanding on its underlying cellular mechanisms remains elusive. This study evaluated whether the ubiquitin-proteasome system (UPS) in the rostral ventrolateral medulla (RVLM), a neural substrate that our laboratory identifi...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1186/1423-0127-19-48

    authors: Wu CH,Chan JY,Chou JL,Chan SH,Chang AY

    更新日期:2012-04-30 00:00:00

  • Therapeutic evaluation of HIV transduction basic domain-conjugated superoxide dismutase solution on suppressive effects of the formation of peroxynitrite and expression of COX-2 in murine skin.

    abstract:BACKGROUND:Homeostasis of reactive oxygen species (ROS) in the skin is regulated by antioxidant defenses. The inflammatory states of skin diseases which range from acute rashes to chronic conditions are related to the level of ROS. The involvement of superoxide dismutase (SOD) in restoring the antioxidant capacity can ...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1186/s12929-016-0226-7

    authors: Liu TP,Chen YP,Chou CM,Chiu TT,Chen CT

    更新日期:2016-01-20 00:00:00

  • Amino acid residues 201-205 in C-terminal acidic tail region plays a crucial role in antibacterial activity of HMGB1.

    abstract:BACKGROUND:Antibacterial activity is a novel function of high-mobility group box 1 (HMGB1). However, the functional site for this new effect is presently unknown. METHODS AND RESULTS:In this study, recombinant human HMGB1 A box and B box (rHMGB1 A box, rHMGB1 B box), recombinant human HMGB1 (rHMGB1) and the truncated ...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1186/1423-0127-16-83

    authors: Gong W,Li Y,Chao F,Huang G,He F

    更新日期:2009-09-14 00:00:00

  • Expression of cyclooxygenase-2 related to angiogenesis in uterine cervical cancers.

    abstract::Angiogenesis is essential for development, growth and advancement of solid tumors. Cyclooxygenase (COX)-2 is recognized as an angiogenic factor in various tumors. This prompted us to study the clinical implications of COX-2 expression related to angiogenesis in uterine cervical cancers. There was a significant correla...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1007/s11373-006-9114-6

    authors: Fujimoto J,Toyoki H,Sato E,Sakaguchi H,Jahan I,Alam SM,Tamaya T

    更新日期:2006-11-01 00:00:00

  • Suberoylanilide hydroxamic acid represses glioma stem-like cells.

    abstract:BACKGROUND:Glioma stem-like cells (GSCs) are proposed to be responsible for high resistance in glioblastoma multiforme (GBM) treatment. In order to find new strategies aimed at reducing GSC stemness and improving GBM patient survival, we investigated the effects and mechanism of a histone deacetylases (HDACs) inhibitor...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1186/s12929-016-0296-6

    authors: Hsu CC,Chang WC,Hsu TI,Liu JJ,Yeh SH,Wang JY,Liou JP,Ko CY,Chang KY,Chuang JY

    更新日期:2016-11-18 00:00:00

  • Current use of autologous adipose tissue-derived stromal vascular fraction cells for orthopedic applications.

    abstract::Autologous adipose stromal vascular fractions (SVFs) containing adipose tissue-derived stem cells (ASCs) are currently being used in clinical settings for various orthopedic applications for human patients. Due to its potential capability of regenerating cartilage, bone, and tendons, autologous adipose SVFs are being ...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章,评审

    doi:10.1186/s12929-017-0318-z

    authors: Pak J,Lee JH,Park KS,Park M,Kang LW,Lee SH

    更新日期:2017-01-31 00:00:00

  • GABA-B receptor activation in the rat globus pallidus potently suppresses pentylenetetrazol-induced tonic seizures.

    abstract::To determine the involvement of the globus pallidus in mediating epilepsy, the effects of microinjection of a GABA uptake blocker (tiagabine), a benzodiazepine agonist (zolpidem) and a GABA-B receptor agonist (baclofen) on pentylenetetrazol (PTZ)-induced tonic seizure were examined in adult rats. Administration of PTZ...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1007/BF02256094

    authors: Chen L,Chan YS,Yung WH

    更新日期:2004-07-01 00:00:00

  • Identification of inosine as an endogenous modulator for the benzodiazepine binding site of the GABAA receptors.

    abstract::Previously we have reported the presence of endogenous ligands that are involved in the regulation of the binding of muscimol to the GABA binding site of the GABAA receptors. Here, we report the presence of multiple forms of endogenous ligands in the brain which modulate the binding of flunitrazepam (FNZP) to the benz...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1007/BF02255859

    authors: Yarom M,Tang XW,Wu E,Carlson RG,Vander Velde D,Lee X,Wu J

    更新日期:1998-07-01 00:00:00

  • Multidrug-resistant phenotype and isolation of a novel SHV- beta-Lactamase variant in a clinical isolate of Enterobacter cloacae.

    abstract:BACKGROUND:ESBL-producing bacteria are a clinical problem in the management of diseases caused by these pathogens. Worldwide, systemic infections with BL enzymes are evolving by mutations from classical bla genes in an intensified manner and they continue to be transferred across species. RESULTS:E.cloacae BF1417 isol...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1186/s12929-015-0131-5

    authors: Bourouis A,Ben Moussa M,Belhadj O

    更新日期:2015-04-11 00:00:00

  • Expression of a truncated retroviral envelope gene enhances expression of normal cellular phenotypes.

    abstract::The envelope gene of Moloney murine leukemia virus (Mo-MLV) and its various functional domains have been studied extensively but not as much in terms of their biological effects on cell growth. In this study, we report the biological characterization of a truncated Mo-MLV envelope gene, LN11, which is devoid of a sign...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1007/BF02253367

    authors: Chen H,Chung SW,Wong PM

    更新日期:2000-11-01 00:00:00

  • Mitofusion-2-mediated alleviation of insulin resistance in rats through reduction in lipid intermediate accumulation in skeletal muscle.

    abstract:BACKGROUND:Increased lipid accumulation and mitochondrial dysfunction within skeletal muscle have been shown to be strongly associated with insulin resistance. However, the role of mitofusion-2 (MFN2), a key factor in mitochondrial function and energy metabolism, in skeletal muscle lipid intermediate accumulation remai...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1186/1423-0127-20-45

    authors: Zhang X,Wang C,Song G,Gan K,Kong D,Nie Q,Ren L

    更新日期:2013-07-01 00:00:00

  • Perinatal Pb2+ exposure alters the expression of genes related to the neurodevelopmental GABA-shift in postnatal rats.

    abstract:BACKGROUND:Lead (Pb2+) is an environmental neurotoxicant that disrupts neurodevelopment, communication, and organization through competition with Ca2+ signaling. How perinatal Pb2+ exposure affects Ca2+-related gene regulation remains unclear. However, Ca2+ activates the L-Type voltage sensitive calcium channel β-3 sub...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1186/s12929-018-0450-4

    authors: Neuwirth LS,Phillips GR,El Idrissi A

    更新日期:2018-05-24 00:00:00

  • Isoform-specific effects of apoE on neurite outgrowth in olfactory epithelium culture.

    abstract:BACKGROUND:The apolipoprotein E4 (apoE4) genotype is a major risk factor for developing late-onset Alzheimer's disease (AD). Inheritance of apoE4 is also associated with impairments in olfactory function in early stages of AD. In this project we examined the effects of the three common isoforms of human apoE (apoE2, ap...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1186/1423-0127-20-49

    authors: Hussain A,Luong M,Pooley A,Nathan BP

    更新日期:2013-07-12 00:00:00

  • Structural analysis of reverse transcriptase mutations at codon 215 explains the predominance of T215Y over T215F in HIV-1 variants selected under antiretroviral therapy.

    abstract::Mutations at codon 215 of HIV-1 reverse transcriptase (RT) confer resistance to nucleoside analogs through RT-catalyzed ATP-dependent phosphorolysis. We showed that mutation T215Y is predominant over T215F (respectively 38.8 vs. 7.04% of 7312 sequences from a cohort of patients receiving antiretroviral therapy in Fran...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1007/s11373-005-9011-4

    authors: Yahi N,Fantini J,Henry M,Tourrès C,Tamalet C

    更新日期:2005-10-01 00:00:00

  • Acute respiratory distress syndrome.

    abstract::Acute respiratory distress syndrome (ARDS) can be associated with various disorders. Among these, coronavirus infection may cause life-threatening severe acute respiratory syndrome (SARS). In this review, we present animal models and techniques for the study of ARDS, and discuss the roles and possible mechanisms of va...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章,评审

    doi:10.1159/000073523

    authors: Chen HI,Kao SJ,Wang D,Lee RP,Su CF

    更新日期:2003-01-01 00:00:00

  • Molecular oncology focus - is carcinogenesis a 'mitochondriopathy'?

    abstract::Mitochondria are sub-cellular organelles that produce adenosine triphosphate (ATP) through oxidative phosphorylation (OXPHOS). As suggested over 70 years ago by Otto Warburg and recently confirmed with molecular techniques, alterations in respiratory activity and in mitochondrial DNA (mtDNA) appear to be common featur...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章,评审

    doi:10.1186/1423-0127-17-31

    authors: Czarnecka AM,Czarnecki JS,Kukwa W,Cappello F,Scińska A,Kukwa A

    更新日期:2010-04-25 00:00:00

  • Lectin of Concanavalin A as an anti-hepatoma therapeutic agent.

    abstract::Liver cancer is the predominant cause of cancer mortality in males of Southern China and Taiwan. The current therapy is not satisfactory, and more effective treatments are needed. In the search for new therapies for liver tumor, we found that Concanavalin A (Con A), a lectin from Jack bean seeds, can have a potent ant...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章,评审

    doi:10.1186/1423-0127-16-10

    authors: Lei HY,Chang CP

    更新日期:2009-01-19 00:00:00

  • Protein Kinase Activity of the Insulin Receptor Is Essential for Insulin-Regulated Gene Expression.

    abstract::Two Chinese hamster ovary (CHO) cell lines stably transfected with human insulin receptor cDNA, CHO-wt and CHO-mut, which express an equivalent number of normal and kinase-defective human insulin receptors, respectively, were used to assess the roles of insulin receptor tyrosine kinase activity in insulin-regulated ge...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1007/BF02258333

    authors: Lin SC,Chen MF,Chou CK

    更新日期:1994-12-01 00:00:00

  • Pharmacological doses of Zn2+ induce a muscarinic cholinergic supersensitivity.

    abstract::The goal of this study was to evaluate the effect of chronic Zn2+ administration (1 mg/kg/day for 1 month) in Sprague-Dawley rats (n = 11) on motility and rearing behaviors (number of events/10 min measured in motility cage), on memory (percentage of failures using a foot-shock double T maze), on the number of muscari...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1159/000067296

    authors: Bonfante-Cabarcas R,Bravo I,Nello C,Gutiérrez-Reyes E,Loureiro Dos Santos NE,Moreno-Yanes JA

    更新日期:2002-11-01 00:00:00

  • Dynactin affects extension and assembly of adherens junctions in Drosophila photoreceptor development.

    abstract::Drosophila eye development is a progressive process including cell fate determination, pattern formation, and rhabdomere morphogenesis. During eye development, a dramatic change in cell shape, which involves turning and extension of the photoreceptor apical surface, occurs in the early pupal stages. It is known that a...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1007/BF02254441

    authors: Fan SS

    更新日期:2004-05-01 00:00:00

  • Identification of okadaic-acid-induced genes by mRNA differential display in glioma cells.

    abstract::To identify novel genes associated with apoptosis in glioma cells, we treated T98G glioma cells with okadaic acid (OA). Differential display using 15 random primers was performed on RNA extracted from these cells. Upregulated bands were excised from polyacrylamide gels and cloned. Northern blots were used to confirm R...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1007/BF02256622

    authors: Chin LS,Singh SK,Wang Q,Murray SF

    更新日期:2000-03-01 00:00:00

  • Standardized, systemic phenotypic analysis of Slc12a1I299F mutant mice.

    abstract:BACKGROUND:Type I Bartter syndrome is a recessive human nephropathy caused by loss-of-function mutations in the SLC12A1 gene coding for the Na+-K+-2Cl- cotransporter NKCC2. We recently established the mutant mouse line Slc12a1I299F exhibiting kidney defects highly similar to the late-onset manifestation of this heredit...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1186/s12929-014-0068-0

    authors: Kemter E,Rathkolb B,Becker L,Bolle I,Busch DH,Dalke C,Elvert R,Favor J,Graw J,Hans W,Ivandic B,Kalaydjiev S,Klopstock T,Rácz I,Rozman J,Schrewe A,Schulz H,Zimmer A,Fuchs H,Gailus-Durner V,Hrabe de Angelis M,Wolf

    更新日期:2014-08-02 00:00:00

  • PLCβ1-SHP-2 complex, PLCβ1 tyrosine dephosphorylation and SHP-2 phosphatase activity: a new part of Angiotensin II signaling?

    abstract:BACKGROUND:Angiotensin II (Ang II) signaling occurs via two major receptors which activate non-receptor tyrosin kinases that then interact with protein tyrosin-phosphatases (PTPs) to regulate cell function. SHP-2 is one such important PTP that also functions as an adaptor to promote downstream signaling pathway. Its ro...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1186/1423-0127-18-38

    authors: Calò LA,Bordin L,Davis PA,Pagnin E,Dal Maso L,Rossi GP,Pessina AC,Clari G

    更新日期:2011-06-13 00:00:00

  • Update on recent preclinical and clinical studies of T790M mutant-specific irreversible epidermal growth factor receptor tyrosine kinase inhibitors.

    abstract::The first- and second-generation epidermal growth factor receptor tyrosine kinase inhibitors (1/2G EGFR-TKIs) gefitinib, erlotinib, and afatinib have all been approved as standard first-line treatments for advanced EGFR mutation-positive non-small cell lung cancer. The third-generation (3G) EGFR-TKIs have been develop...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章,评审

    doi:10.1186/s12929-016-0305-9

    authors: Liao BC,Lin CC,Lee JH,Yang JC

    更新日期:2016-12-03 00:00:00

  • Enhanced muscarinic M1 receptor gene expression in the corpus striatum of streptozotocin-induced diabetic rats.

    abstract::Acetylcholine (ACh), the first neurotransmitter to be identified, regulate the activities of central and peripheral functions through interactions with muscarinic receptors. Changes in muscarinic acetylcholine receptor (mAChR) have been implicated in the pathophysiology of many major diseases of the central nervous sy...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1186/1423-0127-16-38

    authors: Gireesh G,Kumar TP,Mathew J,Paulose C

    更新日期:2009-04-03 00:00:00

  • Long-term expansion of directly reprogrammed keratinocyte-like cells and in vitro reconstitution of human skin.

    abstract:BACKGROUND:Human keratinocytes and derived products are crucial for skin repair and regeneration. Despite substantial advances in engineered skin equivalents, their poor availability and immunorejection remain major challenges in skin grafting. METHODS:Induced keratinocyte-like cells (iKCs) were directly reprogrammed ...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1186/s12929-020-00642-1

    authors: Zheng J,Yun W,Park J,Kang PJ,Lee G,Song G,Kim IY,You S

    更新日期:2020-04-20 00:00:00

  • Biomarkers of severe dengue disease - a review.

    abstract::Dengue virus infection presents a wide spectrum of manifestations including asymptomatic condition, dengue fever (DF), or severe forms, such as dengue hemorrhagic fever (DHF) and dengue shock syndrome (DSS) in affected individuals. The early prediction of severe dengue in patients without any warning signs who may lat...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章,评审

    doi:10.1186/s12929-015-0191-6

    authors: John DV,Lin YS,Perng GC

    更新日期:2015-10-14 00:00:00

  • TGF-β induces HLA-G expression through inhibiting miR-152 in gastric cancer cells.

    abstract:BACKGROUND:Mounting evidences have showed the important role of transforming growth factor-β (TGF-β) in immunological surveillance of tumors. Some studies have also indicated human leukocyte antigen (HLA)-G-associated immune escape involving TGF-β management in gastric cancer (GC). However, the mechanism underlying it ...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1186/s12929-015-0177-4

    authors: Guan Z,Song B,Liu F,Sun D,Wang K,Qu H

    更新日期:2015-12-02 00:00:00

  • 5-methoxytryptophan: an arsenal against vascular injury and inflammation.

    abstract::5-methoxytryptophan (5-MTP) is an endothelial factor with anti-inflammatory properties. It is synthesized from L-tryptophan via two enzymatic steps: tryptophan hydroxylase-1 (TPH-1) and hydroxyindole O-methyltransferase. Lipopolysaccharide (LPS) and pro-inflammatory cytokines suppress endothelial 5-MTP production by i...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章,评审

    doi:10.1186/s12929-020-00671-w

    authors: Wu KK,Kuo CC,Yet SF,Lee CM,Liou JY

    更新日期:2020-07-07 00:00:00

  • Modulation of catecholamine release by endogenous adenosine in the rat adrenal medulla.

    abstract::Adenosine was shown to inhibit norepinephrine (NE) release from sympathetic nerve endings. The purpose of this study was to examine whether endogenous adenosine restrains NE and epinephrine release from the adrenal medulla. The effects of an adenosine receptor antagonist, 1,3-dipropyl-8-(p-sulfophenyl) xanthine (DPSPX...

    journal_title:Journal of biomedical science

    pub_type: 杂志文章

    doi:10.1007/BF02255947

    authors: Tseng CJ,Chan JY,Lo WC,Jan CR

    更新日期:2001-09-01 00:00:00