Mobility of pectin methylesterase in pectin/cellulose gels is enhanced by the presence of cellulose and by its catalytic capacity.

Abstract:

:The pectin methylesterase action is usually studied in a homogeneous aqueous medium in the presence of a large excess of soluble substrate and water. However in the cell wall, the water content is much lower, the substrate is cross-linked with itself or with other polymers, and the enzyme has to diffuse through the solid matrix before catalysing the linkage breakdown. As plant primary cell walls can be considered as cellulose-reinforced hydrogels, this study investigated the diffusion of a fungal pectin methylesterase in pectin/cellulose gels used as cell wall-mimicking matrix to understand the impact of this matrix and its (micro) structure on the enzyme's diffusion within it. The enzyme mobility was followed by synchrotron microscopy thanks to its auto-fluorescence after deep-UV excitation. Time-lapse imaging and quantification of intensity signal by image analysis revealed that the diffusion of the enzyme was impacted by at least two criteria: (i) only the active enzyme was able to diffuse, showing that the mobility was related to the catalytic ability, and (ii) the diffusion was improved by the presence of cellulose in the gel.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Bonnin E,Alvarado C,Crépeau MJ,Bouchet B,Garnier C,Jamme F,Devaux MF

doi

10.1038/s41598-019-49108-x

subject

Has Abstract

pub_date

2019-08-29 00:00:00

pages

12551

issue

1

issn

2045-2322

pii

10.1038/s41598-019-49108-x

journal_volume

9

pub_type

杂志文章
  • Variations in oral microbiome profiles in rheumatoid arthritis and osteoarthritis with potential biomarkers for arthritis screening.

    abstract::The key to arthritis management is early diagnosis and treatment to prevent further joint destruction and maximize functional ability. Osteoarthritis (OA) and rheumatoid arthritis (RA) are two common types of arthritis that the primary care provider must differentiate, in terms of diagnosis and treatment. Effective an...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-35473-6

    authors: Chen B,Zhao Y,Li S,Yang L,Wang H,Wang T,Bin Shi,Gai Z,Heng X,Zhang C,Yang J,Zhang L

    更新日期:2018-11-20 00:00:00

  • Microevolution of Campylobacter jejuni during long-term infection in an immunocompromised host.

    abstract::Campylobacteriosis typically manifests as a short-lived, self-limiting gastrointestinal infection in humans, however prolonged infection can be seen in cases with underlying immunodeficiency. Public Health England received 25 isolates of Campylobacter jejuni from an individual with combined variable immunodeficiency o...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-66771-7

    authors: Barker CR,Painset A,Swift C,Jenkins C,Godbole G,Maiden MCJ,Dallman TJ

    更新日期:2020-06-22 00:00:00

  • Variations in plantar pressure and balance in HIV-infected children in antiretroviral therapy.

    abstract::Balance disorders have been poorly investigated and somewhat neglected in people infected with the human immunodeficiency virus, especially in children, whose have intrinsic and extrinsic risk factors that may compromise the balance. To evaluate the foot plantar pressures and the balance in children with acquired immu...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-41028-0

    authors: da Silva Pontes L,Callegari B,Magno L,Moraes A,Silva BG,Manso K,Barros B,Araújo AP,Silva MC,Dias GA,Vasconcelos BH,Costa E Silva A,Libonati RM,Souza GS

    更新日期:2019-03-13 00:00:00

  • Epidural Dexmedetomidine Reduces the Requirement of Propofol during Total Intravenous Anaesthesia and Improves Analgesia after Surgery in Patients undergoing Open Thoracic Surgery.

    abstract::The aim of this study was to assess the systemic and analgesic effects of epidural dexmedetomidine in thoracic epidural anaesthesia (TEA) combined with total intravenous anaesthesia during thoracic surgery. Seventy-one patients undergoing open thoracotomy were included in this study and randomly divided into three gro...

    journal_title:Scientific reports

    pub_type: 杂志文章,随机对照试验

    doi:10.1038/s41598-017-04382-5

    authors: Zeng X,Jiang J,Yang L,Ding W

    更新日期:2017-06-21 00:00:00

  • Self-cleaning of Surfaces: the Role of Surface Wettability and Dust Types.

    abstract::The self-cleaning property is usually connected to superhydrophobic surfaces (SHSs) where the dust particles can be easily removed by the rolling motion of droplets. It seems that superhydrophobicity (its durability is questionable nowadays) is a necessity. However here, it is disclosed that self-cleaning can also be ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep38239

    authors: Quan YY,Zhang LZ,Qi RH,Cai RR

    更新日期:2016-12-05 00:00:00

  • Heterogeneous Porphyromonas gingivalis LPS modulates immuno-inflammatory response, antioxidant defense and cytoskeletal dynamics in human gingival fibroblasts.

    abstract::Periodontal (gum) disease is a highly prevalent infection and inflammation accounting for the majority of tooth loss in adult population worldwide. Porphyromonas gingivalis is a keystone periodontal pathogen and its lipopolysaccharide (PgLPS) acts as a major virulence attribute to the disease. Herein, we deciphered th...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep29829

    authors: Herath TDK,Darveau RP,Seneviratne CJ,Wang CY,Wang Y,Jin L

    更新日期:2016-08-19 00:00:00

  • 2, 3-Dimethylmaleic anhydride (3, 4-Dimethyl-2, 5-furandione): A plant derived insecticidal molecule from Colocasia esculenta var. esculenta (L.) Schott.

    abstract::The phasing out of methyl bromide as a fumigant, resistance problems with phosphine and other fumigants in stored product beetles, and serious concern with human health and environmental safety have triggered the search for alternative biofumigants of plant origin. Despite the identification of a large number of plant...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep20546

    authors: Rajashekar Y,Tonsing N,Shantibala T,Manjunath JR

    更新日期:2016-02-03 00:00:00

  • Comparative Mitochondrial Genome Analysis of Eligma narcissus and other Lepidopteran Insects Reveals Conserved Mitochondrial Genome Organization and Phylogenetic Relationships.

    abstract::In this study, we sequenced the complete mitochondrial genome of Eligma narcissus and compared it with 18 other lepidopteran species. The mitochondrial genome (mitogenome) was a circular molecule of 15,376 bp containing 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes and an...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep26387

    authors: Dai LS,Zhu BJ,Zhao Y,Zhang CF,Liu CL

    更新日期:2016-05-25 00:00:00

  • A continuous sirtuin activity assay without any coupling to enzymatic or chemical reactions.

    abstract::Sirtuins are NAD(+) dependent lysine deacylases involved in many regulatory processes such as control of metabolic pathways, DNA repair and stress response. Modulators of sirtuin activity are required as tools for uncovering the biological function of these enzymes and as potential therapeutic agents. Systematic disco...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep22643

    authors: Schuster S,Roessler C,Meleshin M,Zimmermann P,Simic Z,Kambach C,Schiene-Fischer C,Steegborn C,Hottiger MO,Schutkowski M

    更新日期:2016-03-04 00:00:00

  • Viral-mediated fusion of mesenchymal stem cells with cells of the infarcted heart hinders healing via decreased vascularization and immune modulation.

    abstract::Cell fusion can occur between mesenchymal stem cells (MSCs) transplanted to improve cardiac function and cells of the recipient. The therapeutic benefit or detriment of resultant cell hybrids is unknown. Here we augment fusion of transplanted MSCs with recipient cardiac cell types via viral fusogens to determine how c...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep20283

    authors: Freeman BT,Ogle BM

    更新日期:2016-02-05 00:00:00

  • Erratum: Arabidopsis thaliana dehydroascorbate reductase 2: Conformational flexibility during catalysis.

    abstract::This corrects the article DOI: 10.1038/srep42494. ...

    journal_title:Scientific reports

    pub_type: 杂志文章,已发布勘误

    doi:10.1038/srep46896

    authors: Bodra N,Young D,Rosado LA,Pallo A,Wahni K,De Proft F,Huang J,Van Breusegem F,Messens J

    更新日期:2017-08-24 00:00:00

  • Measuring Tumor Mutational Burden (TMB) in Plasma from mCRPC Patients Using Two Commercial NGS Assays.

    abstract::Tumor tissue mutational burden (TMB) has emerged as a promising predictive biomarker for immune checkpoint therapy. Measuring TMB from circulating tumor DNA (ctDNA) found in plasma is attractive in tissue-constrained indications. We compared the performance of two plasma-based commercial TMB assays including the effec...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-37128-y

    authors: Qiu P,Poehlein CH,Marton MJ,Laterza OF,Levitan D

    更新日期:2019-01-14 00:00:00

  • The effect of enamel proteins on erosion.

    abstract::Enamel proteins form a scaffold for growing hydroxyapatite crystals during enamel formation. They are then almost completely degraded during enamel maturation, resulting in a protein content of only 1% (w/v) in mature enamel. Nevertheless, this small amount of remaining proteins has important effects on the mechanical...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep15194

    authors: Baumann T,Carvalho TS,Lussi A

    更新日期:2015-10-15 00:00:00

  • Increased EMR2 expression on neutrophils correlates with disease severity and predicts overall mortality in cirrhotic patients.

    abstract::Patients with liver cirrhosis are susceptible to infections with high short-term mortalities. One CD97-related EGF-TM7 molecule, EMR2 (EGF-like molecule containing mucin-like hormone receptor 2), had been shown to regulate human neutrophil function, potentiate systemic inflammation. Nevertheless, EMR2 could also suppr...

    journal_title:Scientific reports

    pub_type: 临床试验,杂志文章

    doi:10.1038/srep38250

    authors: Huang CH,Jeng WJ,Ho YP,Teng W,Hsieh YC,Chen WT,Chen YC,Lin HH,Sheen IS,Lin CY

    更新日期:2016-12-01 00:00:00

  • Glycaemic Profiles of Children With Overweight and Obesity in Free-living Conditions in Association With Cardiometabolic Risk.

    abstract::Insulin resistance is common among children with overweight and obesity. However, knowledge about glucose fluctuations in these children is scarce. This study aims to evaluate glycaemic profiles in children with overweight and obesity in free-living conditions, and to examine the association between glycaemic profiles...

    journal_title:Scientific reports

    pub_type: 临床试验,杂志文章

    doi:10.1038/srep31892

    authors: Rijks J,Karnebeek K,van Dijk JW,Dorenbos E,Gerver WJ,Stouthart P,Plat J,Vreugdenhil A

    更新日期:2016-08-18 00:00:00

  • Palmitic Acid-BSA enhances Amyloid-β production through GPR40-mediated dual pathways in neuronal cells: Involvement of the Akt/mTOR/HIF-1α and Akt/NF-κB pathways.

    abstract::The pathophysiological actions of fatty acids (FAs) on Alzheimer's disease (AD), which are possibly mediated by genomic effects, are widely known; however, their non-genomic actions remain elusive. The aim of this study was to investigate the non-genomic mechanism of extra-cellular palmitic acid (PA) regulating beta-a...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-04175-w

    authors: Kim JY,Lee HJ,Lee SJ,Jung YH,Yoo DY,Hwang IK,Seong JK,Ryu JM,Han HJ

    更新日期:2017-06-28 00:00:00

  • Relationship between dental and periodontal health status and the salivary microbiome: bacterial diversity, co-occurrence networks and predictive models.

    abstract::The present study used 16S rRNA gene amplicon sequencing to assess the impact on salivary microbiome of different grades of dental and periodontal disease and the combination of both (hereinafter referred to as oral disease), in terms of bacterial diversity, co-occurrence network patterns and predictive models. Our sc...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-79875-x

    authors: Relvas M,Regueira-Iglesias A,Balsa-Castro C,Salazar F,Pacheco JJ,Cabral C,Henriques C,Tomás I

    更新日期:2021-01-13 00:00:00

  • Defect mediated manipulation of nanoclusters on an insulator.

    abstract::With modern scanning probe microscopes, it is possible to manipulate surface structures even at the atomic level. However, manipulation of nanoscale objects such as clusters is often more relevant and also more challenging due to the complicated interactions between the surface, cluster and apparatus. We demonstrate t...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep01270

    authors: Hynninen T,Cabailh G,Foster AS,Barth C

    更新日期:2013-01-01 00:00:00

  • Magneto-actuated cell apoptosis by biaxial pulsed magnetic field.

    abstract::We report on a highly efficient magneto-actuated cancer cell apoptosis method using a biaxial pulsed magnetic field configuration, which maximizes the induced magnetic torque. The light transmissivity dynamics show that the biaxial magnetic field configuration can actuate the magnetic nanoparticles with higher respons...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-11279-w

    authors: Wong W,Gan WL,Liu N,Lew WS

    更新日期:2017-09-07 00:00:00

  • Chinese olive extract ameliorates hepatic lipid accumulation in vitro and in vivo by regulating lipid metabolism.

    abstract::Chinese olive contains plenty of polyphenols, which possess a wide range of biological actions. In this study, we aimed to investigate the role of the ethyl acetate fraction of Chinese olive fruit extract (CO-EtOAc) in the modulation of lipid accumulation in vitro and in vivo. In cellular studies, CO-EtOAc attenuated ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-19553-1

    authors: Yeh YT,Cho YY,Hsieh SC,Chiang AN

    更新日期:2018-01-18 00:00:00

  • A semi-automated quantitative comparison of metal artifact reduction in photon-counting computed tomography by energy-selective thresholding.

    abstract::An evaluation of energy thresholding and acquisition mode for metal artifact reduction in Photon-counting detector CT (PCD-CT) compared to conventional energy-integrating detector CT (EID-CT) was performed. Images of a hip prosthesis phantom placed in a water bath were acquired on a scanner with PCD-CT and EID-CT (tub...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-77904-3

    authors: Do TD,Sawall S,Heinze S,Reiner T,Ziener CH,Stiller W,Schlemmer HP,Kachelrieß M,Kauczor HU,Skornitzke S

    更新日期:2020-12-03 00:00:00

  • Soil classification predicts differences in prokaryotic communities across a range of geographically distant soils once pH is accounted for.

    abstract::Agricultural land is typically managed based on visible plant life at the expense of the belowground majority. However, microorganisms mediate processes sustaining plant life and the soil environment. To understand the role of microbes we first must understand what controls soil microbial community assembly. We assess...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep45369

    authors: Kaminsky R,Trouche B,Morales SE

    更新日期:2017-03-28 00:00:00

  • Satellite gravity measurement monitoring terrestrial water storage change and drought in the continental United States.

    abstract::We use satellite gravity measurements in the Gravity Recovery and Climate Experiment (GRACE) to estimate terrestrial water storage (TWS) change in the continental United States (US) from 2003 to 2012, and establish a GRACE-based Hydrological Drought Index (GHDI) for drought monitoring. GRACE-inferred TWS exhibits oppo...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep19909

    authors: Yi H,Wen L

    更新日期:2016-01-27 00:00:00

  • Author Correction: Preparation and antimicrobial activity of ZnO-NPs coated cotton/starch and their functionalized ZnO-Ag/cotton and Zn(II) curcumin/cotton materials.

    abstract::An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-020-65025-w

    authors: El-Nahhal IM,Salem J,Anbar R,Kodeh FS,Elmanama A

    更新日期:2020-05-27 00:00:00

  • Protective humoral and CD4+ T cellular immune responses of Staphylococcus aureus vaccine MntC in a murine peritonitis model.

    abstract::Staphylococcus aureus can cause different types of diseases from mild skin infections to life-threatening sepsis worldwide. Owing to the emergence and transmission of multidrug-resistant strains, developing an impactful immunotherapy especially vaccine control approach against S. aureus infections is increasingly enco...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-22044-y

    authors: Yu W,Yao D,Yu S,Wang X,Li X,Wang M,Liu S,Feng Z,Chen X,Li W,Wang L,Liu W,Ma J,Yu L,Tong C,Song B,Cui Y

    更新日期:2018-02-26 00:00:00

  • Seabird distribution patterns observed with fishing vessel's radar reveal previously undescribed sub-meso-scale clusters.

    abstract::Seabirds are known to concentrate on prey patches or at predators aggregations standing for potential feeding opportunities. They may search for prey using olfaction or by detecting visually feeding con-specifics and sub-surface predators, or even boats. Thus, they might form a foraging network. We hypothesized that c...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-07480-6

    authors: Assali C,Bez N,Tremblay Y

    更新日期:2017-08-04 00:00:00

  • Parallel expression profiling of hepatic and serum microRNA-122 associated with clinical features and treatment responses in chronic hepatitis C patients.

    abstract::MicroRNAs (miRNAs) are small, non-coding RNAs that regulate a variety of biological processes. Recently, human liver-specific miRNA miR-122 has been reported to facilitate hepatitis C virus (HCV) replication in liver cells. HCV is one of the leading causes of liver diseases worldwide. In Pakistan, the estimated preval...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep21510

    authors: Butt AM,Raja AJ,Siddique S,Khan JS,Shahid M,Tayyab GU,Minhas Z,Umar M,Idrees M,Tong Y

    更新日期:2016-02-22 00:00:00

  • Dynamic mechanism for the transcription apparatus orchestrating reliable responses to activators.

    abstract::The transcription apparatus (TA) is a huge molecular machine. It detects the time-varying concentrations of transcriptional activators and initiates mRNA transcripts at appropriate rates. Based on the general structural organizations of the TA, we propose how the TA dynamically orchestrates transcriptional responses. ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep00422

    authors: Wang Y,Liu F,Wang W

    更新日期:2012-01-01 00:00:00

  • Vitamin D alleviates lead induced renal and testicular injuries by immunomodulatory and antioxidant mechanisms in rats.

    abstract::This study measured the effects of vitamin D (VD) supplementation on the underlying molecular pathways involved in renal and testicular damage induced by lead (Pb) toxicity. Thirty two adult male Wistar rats were divided equally into four groups that were treated individually or simultaneously, except the negative con...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-23258-w

    authors: BaSalamah MA,Abdelghany AH,El-Boshy M,Ahmad J,Idris S,Refaat B

    更新日期:2018-03-19 00:00:00

  • Massively parallel sequencing of cell-free DNA in plasma for detecting gynaecological tumour-associated copy number alteration.

    abstract::The discovery of circulating tumour DNA molecules created a paradigm shift in tumour biomarkers as predictors of recurrence. Non-invasive prenatal testing (NIPT) to detect circulating cell-free foetal DNA in maternal plasma is increasingly recognised as a valuable substitute to perceive foetal copy number variation (C...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-29381-y

    authors: Nakabayashi M,Kawashima A,Yasuhara R,Hayakawa Y,Miyamoto S,Iizuka C,Sekizawa A

    更新日期:2018-07-25 00:00:00