Localization of the cis-acting regulatory DNA sequences of the Myxococcus xanthus tps and ops genes.

Abstract:

:The cis-acting regulatory regions of the tps and ops genes of Myxococcus xanthus were localized by analyzing the expression of fusions of these genes with the lacZ gene. A 201-base-pair (bp) fragment of tps DNa extending 95 bp upstream (-95) from the transcriptional start was sufficient to direct developmentally regulated expression of fusion gene activity. The segment of tps DNA between -95 and -81 contained information necessary for developmental regulation. A segment of ops DNa extending upstream to -131 directed a very low level of ops-lacZ fusion expression, but the inclusion of DNA to -208 greatly increased the amount of developmentally regulated expression. M. xanthus DNA upstream from -108 in the tps gene and -311 in the ops gene was required for maximal expression of gene fusion activity. The upstream regulatory regions of both the tps and ops genes seem to be involved in positive transcriptional regulation. Two mutations, a deletion of 1 bp at -8 in the tps gene and a 3-bp substitution at -27 to -29 in the ops gene, greatly increased the level of vegetative expression of gene fusion activity, suggesting that both genes may also be subject to negative regulation in M. xanthus.

journal_name

J Bacteriol

journal_title

Journal of bacteriology

authors

Downard JS,Kim SH,Kil KS

doi

10.1128/jb.170.10.4931-4938.1988

subject

Has Abstract

pub_date

1988-10-01 00:00:00

pages

4931-8

issue

10

eissn

0021-9193

issn

1098-5530

journal_volume

170

pub_type

杂志文章
  • Properties of D-arabinose isomerase purified from two strains of Escherichia coli.

    abstract::d-Arabinose isomerase (EC 5.3.1.3) has been isolated from l-fucose-induced cultures of Escherichia coli K-12 and d-arabinose-induced cultures of E. coli B/r. Both enzymes were homogeneous in an ultracentrifuge and migrated as single bands upon disc electrophoresis in acrylamide gels. The s(20,w) was 14.5 x 10(-13) sec...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.113.2.687-696.1973

    authors: Boulter JR,Gielow WO

    更新日期:1973-02-01 00:00:00

  • Apparent and real recombination frequencies in multicopy plasmids: the need for a novel approach in frequency determination.

    abstract::Recombination studies of bacteria are often carried out with multicopy plasmids, and recombination frequencies are often deduced from the proportion of cells in the population that express a recombinant phenotype. These frequencies should however be called apparent frequencies, since detection of the recombinant cells...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.179.3.754-761.1997

    authors: Chédin F,Dervyn R,Ehrlich SD,Noirot P

    更新日期:1997-02-01 00:00:00

  • Interaction of the exr and lon genes in Escherichia coli.

    abstract::Strains of Escherichia coli carrying the gene lon typically produced excess capsular polysaccharide, and were sensitive to ultraviolet light (UV) irradiation, thymine starvation, and nalidixic acid, forming long filaments after these treatments. Sensitivity was reduced by a number of posttreatments. In the presence of...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.96.5.1704-1710.1968

    authors: Donch J,Green MH,Greenberg J

    更新日期:1968-11-01 00:00:00

  • Dysregulation of Magnesium Transport Protects Bacillus subtilis against Manganese and Cobalt Intoxication.

    abstract::Transition metals are essential for life but are toxic when in excess. Metal ion intoxication may result from the mismetallation of essential metal-dependent enzymes with a noncognate metal. To begin to identify enzymes and processes that are susceptible to mismetallation, we have selected for strains with increased r...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.00711-19

    authors: Pi H,Wendel BM,Helmann JD

    更新日期:2020-03-11 00:00:00

  • Fur regulates expression of the Salmonella pathogenicity island 1 type III secretion system through HilD.

    abstract::The invasion of intestinal epithelial cells by Salmonella enterica serovar Typhimurium is mediated by a type III secretion system (T3SS) encoded on Salmonella pathogenicity island 1 (SPI1). Expression of the SPI1 T3SS is tightly regulated by the combined action of HilC, HilD, and RtsA, three AraC family members that c...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.00926-07

    authors: Ellermeier JR,Slauch JM

    更新日期:2008-01-01 00:00:00

  • Regulation of a new cell wall hydrolase gene, cwlF, which affects cell separation in Bacillus subtilis.

    abstract::Bacillus subtilis produces a 35-kDa cell wall hydrolase, CwlF, during vegetative growth. The CwlF protein was extracted from B. subtilis cwlB sigD mutant cells and separated by sodium dodecyl sulfate-polyacrylamide gel electrophoresis. N-terminal amino acid sequencing revealed that its sequence is completely identical...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.180.9.2549-2555.1998

    authors: Ishikawa S,Hara Y,Ohnishi R,Sekiguchi J

    更新日期:1998-05-01 00:00:00

  • catM encodes a LysR-type transcriptional activator regulating catechol degradation in Acinetobacter calcoaceticus.

    abstract::On the basis of the constitutive phenotypes of two catM mutants of Acinetobacter calcoaceticus, the CatM protein was proposed to repress expression of two different loci involved in catechol degradation, catA and catBCIJFD (E. Neidle, C. Hartnett, and L. N. Ornston, J. Bacteriol. 171:5410-5421, 1989). In spite of its ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.177.20.5891-5898.1995

    authors: Romero-Arroyo CE,Schell MA,Gaines GL 3rd,Neidle EL

    更新日期:1995-10-01 00:00:00

  • Conjugation-mediated genetic exchange in Legionella pneumophila.

    abstract::Genetic exchange mechanisms, to our knowledge, have not been reported for Legionella pneumophila, and consequently, studies on the genetic organization of L. pneumophila have not appeared in the literature. Here, we describe gene transfer mediated by broad host range conjugative plasmids in Legionella spp. Escherichia...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.161.1.80-84.1985

    authors: Dreyfus LA,Iglewski BH

    更新日期:1985-01-01 00:00:00

  • An n-alkane-responsive promoter element found in the gene encoding the peroxisomal protein of Candida tropicalis does not contain a C(6) zinc cluster DNA-binding motif.

    abstract::When an asporogenic diploid yeast, Candida tropicalis, is cultivated on n-alkane, the expression of the genes encoding enzymes of the peroxisomal beta-oxidation pathway is highly induced. An upstream activation sequence (UAS) which can induce transcription in response to n-alkane (UAS(ALK)) was identified on the promo...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.182.9.2492-2497.2000

    authors: Kanai T,Hara A,Kanayama N,Ueda M,Tanaka A

    更新日期:2000-05-01 00:00:00

  • Identification and mapping of nitrogen fixation genes of Rhodobacter capsulatus: duplication of a nifA-nifB region.

    abstract::Rhodobacter capsulatus mutants unable to fix nitrogen were isolated by random transposon Tn5 mutagenesis. The Tn5 insertion sites of 30 Nif- mutants were mapped within three unlinked chromosomal regions designated A, B, and C. The majority of Tn5 insertions (21 mutants) map within nif region A, characterized by two Cl...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.170.2.693-699.1988

    authors: Klipp W,Masepohl B,Pühler A

    更新日期:1988-02-01 00:00:00

  • Iron-dependent transcription of the frpB gene of Helicobacter pylori is controlled by the Fur repressor protein.

    abstract::We have overexpressed and purified the Helicobacter pylori Fur protein and analyzed its interaction with the intergenic regions of divergent genes involved in iron uptake (frpB and ceuE) and oxygen radical detoxification (katA and tsaA). DNase I footprint analysis showed that Fur binds specifically to a high-affinity ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.183.16.4932-4937.2001

    authors: Delany I,Pacheco AB,Spohn G,Rappuoli R,Scarlato V

    更新日期:2001-08-01 00:00:00

  • Electron acceptor taxis and blue light effect on bacterial chemotaxis.

    abstract::Salmonella typhimurium and Escherichia coli from anaerobic cultures displayed tactic responses to gradients of nitrate, fumarate, and oxygen when the appropriate electron transport pathway was present. Such responses were named "electron acceptor taxis" because they are elicited by terminal electron acceptors. Mutant ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.140.2.567-573.1979

    authors: Taylor BL,Miller JB,Warrick HM,Koshland DE Jr

    更新日期:1979-11-01 00:00:00

  • Regulatory citrate lyase mutants of Salmonella typhimurium.

    abstract::Citrate lyase, the key enzyme of anaerobic citrate catabolism, could not be deleted from Salmonella typhimurium. The only class of mutants found had a mode of covalent regulation that strongly resembled the Escherichia coli system: citrate lyase was only active, i.e., acetylated, when a cosubstrate was present. ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.153.1.546-549.1983

    authors: Kulla HG

    更新日期:1983-01-01 00:00:00

  • Purification and characterization of pro-TraTp, the signal sequence-containing precursor of a secreted protein encoded by the F sex factor.

    abstract::The structural gene for the F sex factor outer membrane surface exclusion protein ( traT ) was cloned onto a high-copy-number plasmid where it is expressed from the phage lambda promoter pL. Conditional control over expression was provided by a temperature-sensitive lambda cI repressor. Induction of pL produced large ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.158.2.464-473.1984

    authors: Minkley EG Jr

    更新日期:1984-05-01 00:00:00

  • Analytical studies on regeneration of protoplasts of Geotrichum candidum by quantitative thin-layer-agar plating.

    abstract::A preparation of pure protoplasts of Geotrichum candidum became osmotically stable and colonies developed when the protoplasts were embedded in stabilizing thin-layer-agar and incubated with stabilizing basal medium. When growing protoplasts were exposed to distilled water and then reincubated with basal medium, the p...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.98.1.256-263.1969

    authors: Fukui K,Sagara Y,Yoshida N,Matsuoka T

    更新日期:1969-04-01 00:00:00

  • Location of bacterial polysaccharide during various phases of growth.

    abstract::Polysaccharide-containing material was located by histochemical staining on ultrathin sections of Bacillus cereus and several clostridial species during various phases of growth. These components were located along the cell wall in young vegetative cells and along the developing cortex in sporulating cells. In B. cere...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.98.3.1342-1354.1969

    authors: Walker PD,Short J

    更新日期:1969-06-01 00:00:00

  • Characteristics of cold-sensitive mutants of Escherichia coli K-12 defective in deoxyribonucleic acid replication.

    abstract::Four cold-sensitive mutants of Escherichia coli have been isolated which show a reduced ability to synthesize deoxyribonucleic acid at low temperature. The mutants also have a reduced ability to incorporate nucleoside triphosphates into deoxyribonucleic acid at low temperature in cell preparations made permeable with ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.121.1.99-107.1975

    authors: Wehr CT,Waskell L,Glaser DA

    更新日期:1975-01-01 00:00:00

  • Molecular properties of succinate dehydrogenase isolated from Micrococcus luteus (lysodeikticus).

    abstract::Succinate dehydrogenase (EC 1.3.99.1) of Micrococcus luteus was selectively precipitated from Triton X-100-solubilized membranes by using specific antiserum. The precipitated enzyme contained equimolar amounts of four polypeptides with apparent molecular weights of 72,000, 30,000, 17,000, and 15,000. The 72,000 polype...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.153.3.1493-1501.1983

    authors: Crowe BA,Owen P

    更新日期:1983-03-01 00:00:00

  • Dosage of the smallest chromosome affects both the yeast-hyphal transition and the white-opaque transition of Candida albicans WO-1.

    abstract::The WO-1 strain of Candida albicans is capable of alternating between two highly distinct yeast cell types termed white and opaque (E. H. A. Rikkerrink, B. B. Magee, and P. T. Magee, J. Bacteriol. 170:895-899, 1988; B. Slutsky, M. Staebell, J. Anderson, L. Risen, M. Pfaller, and D. R. Soll, J. Bacteriol. 169:189-197, ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.173.23.7436-7442.1991

    authors: McEachern MJ,Hicks JB

    更新日期:1991-12-01 00:00:00

  • Temperature Control of psaA Expression by PsaE and PsaF in Yersinia pestis.

    abstract::PsaA, the subunit of the fimbria originally referred to as the "pH 6 antigen," is required for full virulence of Yersinia pestis during bubonic plague. The expression of psaA is dependent upon specific environmental signals, and while the signals (high temperature and acidic pH) are defined, the mechanisms underlying ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.00217-19

    authors: Quinn JD,Weening EH,Miner TA,Miller VL

    更新日期:2019-07-24 00:00:00

  • Restriction fragment length polymorphism analysis of Rhizobium galegae strains.

    abstract::Total DNA of various Rhizobium galegae strains representing different geographical origins, and taxonomic divergence was digested with three restriction enzymes separately, Southern blotted, and hybridized with six heterologous probes. The sequence divergences for different pairwise comparisons were calculated from pr...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.171.10.5561-5566.1989

    authors: Kaijalainen S,Lindström K

    更新日期:1989-10-01 00:00:00

  • Respiratory metabolism of a "petite negative"yeast Schizosaccharomyces pombe 972h-.

    abstract::The respiratory metabolism of Schizosaccharomyces pombe 972h(-), a fission, haplontic, "petite negative" yeast, was studied. Glucose and glycerol are good growth substrates and are oxidized under appropriate conditions. l-Lactate, ethanol, malate, and succinate are oxidized but are poor substrates for growth. d-Lactat...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.104.1.473-481.1970

    authors: Heslot H,Goffeau A,Louis C

    更新日期:1970-10-01 00:00:00

  • Addition of Escherichia coli K-12 growth observation and gene essentiality data to the EcoCyc database.

    abstract::The sets of compounds that can support growth of an organism are defined by the presence of transporters and metabolic pathways that convert nutrient sources into cellular components and energy for growth. A collection of known nutrient sources can therefore serve both as an impetus for investigating new metabolic pat...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.01209-13

    authors: Mackie A,Paley S,Keseler IM,Shearer A,Paulsen IT,Karp PD

    更新日期:2014-03-01 00:00:00

  • Identification of a novel operon in Lactococcus lactis encoding three enzymes for lactic acid synthesis: phosphofructokinase, pyruvate kinase, and lactate dehydrogenase.

    abstract::The discovery of a novel multicistronic operon that encodes phosphofructokinase, pyruvate kinase, and lactate dehydrogenase in the lactic acid bacterium Lactococcus lactis is reported. The three genes in the operon, designated pfk, pyk, and ldh, contain 340, 502, and 325 codons, respectively. The intergenic distances ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.175.9.2541-2551.1993

    authors: Llanos RM,Harris CJ,Hillier AJ,Davidson BE

    更新日期:1993-05-01 00:00:00

  • Metronidazole activation and isolation of Clostridium acetobutylicum electron transport genes.

    abstract::An Escherichia coli F19 recA, nitrate reductase-deficient mutant was constructed by transposon mutagenesis and shown to be resistant to metronidazole. This mutant was a most suitable host for the isolation of Clostridium acetobutylicum genes on recombinant plasmids, which activated metronidazole and rendered the E. co...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.173.3.1088-1095.1991

    authors: Santangelo JD,Jones DT,Woods DR

    更新日期:1991-02-01 00:00:00

  • RNase E affects the expression of the acyl-homoserine lactone synthase gene sinI in Sinorhizobium meliloti.

    abstract::Quorum sensing of Sinorhizobium meliloti relies on N-acyl-homoserine lactones (AHLs) as autoinducers. AHL production increases at high population density, and this depends on the AHL synthase SinI and two transcriptional regulators, SinR and ExpR. Our study demonstrates that ectopic expression of the gene rne, coding ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.01471-13

    authors: Baumgardt K,Charoenpanich P,McIntosh M,Schikora A,Stein E,Thalmann S,Kogel KH,Klug G,Becker A,Evguenieva-Hackenberg E

    更新日期:2014-04-01 00:00:00

  • Phylogeny of dissimilatory sulfite reductases supports an early origin of sulfate respiration.

    abstract::Microorganisms that use sulfate as a terminal electron acceptor for anaerobic respiration play a central role in the global sulfur cycle. Here, we report the results of comparative sequence analysis of dissimilatory sulfite reductase (DSR) genes from closely and distantly related sulfate-reducing organisms to infer th...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.180.11.2975-2982.1998

    authors: Wagner M,Roger AJ,Flax JL,Brusseau GA,Stahl DA

    更新日期:1998-06-01 00:00:00

  • Cyanide-resistant respiration of a Neurospora crassa membrane mutant.

    abstract::Choline starvation of the Neurospora crassa chol-1 mutant leads to a decrease in respiration through the cytochrome chain and a concomitant induction of the alternate oxidase. ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.126.1.542-543.1976

    authors: Juretic D

    更新日期:1976-04-01 00:00:00

  • Processing and termination of 23S rRNA-5S rRNA-tRNA(Gly) primary transcripts in Thermus thermophilus HB8.

    abstract::The two 23S rRNA-5S rRNA-tRNAGly operons from the extreme thermophilic eubacterium Thermus thermophilus HB8 were used to characterized the in vivo processing and termination of 23S rRNA-5S rRNA-tRNAGly primary transcripts in this organism by nuclease S1 mapping. A processing site in the pre-23S rRNA 3'-flanking region...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.173.8.2681-2690.1991

    authors: Hartmann RK,Toschka HY,Erdmann VA

    更新日期:1991-04-01 00:00:00

  • Division mutants of Bacillus subtilis: isolation and PBS1 transduction of division-specific markers.

    abstract::A procedure for the isolation of Bacillus subtilis mutants that appear to be defective in septum synthesis has been described. Fourteen mutants isolated with this technique were found to be located at four distinct loci on the B. subtilis chromosome. These have been designated divA, divB, divC, and divD. The four muta...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.108.3.1366-1379.1971

    authors: Van Alstyne D,Simon MI

    更新日期:1971-12-01 00:00:00