Correlated production and consumption of chloromethane in the Arabidopsis thaliana phyllosphere.

Abstract:

:Chloromethane (CH3Cl) is a toxic gas mainly produced naturally, in particular by plants, and its emissions contribute to ozone destruction in the stratosphere. Conversely, CH3Cl can be degraded and used as the sole carbon and energy source by specialised methylotrophic bacteria, isolated from a variety of environments including the phyllosphere, i.e. the aerial parts of vegetation. The potential role of phyllospheric CH3Cl-degrading bacteria as a filter for plant emissions of CH3Cl was investigated using variants of Arabidopsis thaliana with low, wild-type and high expression of HOL1 methyltransferase previously shown to be responsible for most of CH3Cl emissions by A. thaliana. Presence and expression of the bacterial chloromethane dehalogenase cmuA gene in the A. thaliana phyllosphere correlated with HOL1 genotype, as shown by qPCR and RT-qPCR. Production of CH3Cl by A. thaliana paralleled HOL1 expression, as assessed by a fluorescence-based bioreporter. The relation between plant production of CH3Cl and relative abundance of CH3Cl-degrading bacteria in the phyllosphere suggests that CH3Cl-degrading bacteria co-determine the extent of plant emissions of CH3Cl to the atmosphere.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Farhan Ul Haque M,Besaury L,Nadalig T,Bringel F,Mutterer J,Schaller H,Vuilleumier S

doi

10.1038/s41598-017-17421-y

subject

Has Abstract

pub_date

2017-12-14 00:00:00

pages

17589

issue

1

issn

2045-2322

pii

10.1038/s41598-017-17421-y

journal_volume

7

pub_type

杂志文章
  • Systems-level understanding of ethanol-induced stresses and adaptation in E. coli.

    abstract::Understanding ethanol-induced stresses and responses in biofuel-producing bacteria at systems level has significant implications in engineering more efficient biofuel producers. We present a computational study of transcriptomic and genomic data of both ethanol-stressed and ethanol-adapted E. coli cells with computati...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep44150

    authors: Cao H,Wei D,Yang Y,Shang Y,Li G,Zhou Y,Ma Q,Xu Y

    更新日期:2017-03-16 00:00:00

  • Vitamin D3 inhibits micro RNA-17-92 to promote specific immunotherapy in allergic rhinitis.

    abstract::It is recognized that T helper 2 (Th2) polarization plays a critical role in a large number of immune disorders. Yet, the remedies for reconciling the established Th2 polarization are still limited currently. Published data indicate that micro RNA-17-92 cluster is associated with the skewed immune response; 25 vitamin...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-00431-1

    authors: Yu ZJ,Zeng L,Luo XQ,Geng XR,Xu R,Chen K,Yang G,Luo X,Liu ZQ,Liu ZG,Liu DB,Yang PC,Li HB

    更新日期:2017-04-03 00:00:00

  • The Safety Limits Of An Extended Fast: Lessons from a Non-Model Organism.

    abstract::While safety of fasting therapy is debated in humans, extended fasting occurs routinely and safely in wild animals. To do so, food deprived animals like breeding penguins anticipate the critical limit of fasting by resuming feeding. To date, however, no molecular indices of the physiological state that links spontaneo...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep39008

    authors: Bertile F,Fouillen L,Wasselin T,Maes P,Le Maho Y,Van Dorsselaer A,Raclot T

    更新日期:2016-12-19 00:00:00

  • Macromolecular Characterization of Swordfish Oocytes by FTIR Imaging Spectroscopy.

    abstract::During folliculogenesis, primary oocytes of teleosts grow by several orders of magnitude by-self synthesizing proteins and mRNA, or sequestering from blood specific macromolecular components, such as fatty acids and vitellogenin. All these materials are stored into cortical alveoli, yolk globules or oil droplets durin...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-45065-7

    authors: Carnevali O,Candelma M,Sagrati A,Pignalosa P,Giorgini E,Gioacchini G

    更新日期:2019-06-20 00:00:00

  • Multiplex amplicon sequencing for microbe identification in community-based culture collections.

    abstract::Microbiome analysis using metagenomic sequencing has revealed a vast microbial diversity associated with plants. Identifying the molecular functions associated with microbiome-plant interaction is a significant challenge concerning the development of microbiome-derived technologies applied to agriculture. An alternati...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep29543

    authors: Armanhi JS,de Souza RS,de Araújo LM,Okura VK,Mieczkowski P,Imperial J,Arruda P

    更新日期:2016-07-12 00:00:00

  • Ultrahigh field MR imaging of a subconjunctival anti-glaucoma drug delivery system in a rabbit model.

    abstract::Local drug delivery systems (DDS) have become a favourable approach for the treatment of numerous diseases. Biomedical imaging techniques such as ultrahigh field magnetic resonance imaging (UHF-MRI) offer unique insight into DDS biodegradation in vivo. We describe the establishment of a 7 Tesla MRI routine for longitu...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-15954-w

    authors: Kopp F,Eickner T,Polei S,Falke K,Witt M,Grabow N,Stachs O,Guthoff RF,Lindner T

    更新日期:2017-11-17 00:00:00

  • Coexisting and mixing phenomena of thermoacoustic and magnetoacoustic waves in water.

    abstract::Concurrent generation and mixing phenomenon of thermoacoustic (TA) and magnetoacoustic (MA) waves in water are predicted and observed. A theory unifying TA and MA is further put forward to analyze it. By scaling down the radio frequency in thermoacoustics to the low mega Hertz range and by incorporating appropriately ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep11489

    authors: Feng X,Gao F,Kishor R,Zheng Y

    更新日期:2015-06-26 00:00:00

  • Analysis of tractable allosteric sites in G protein-coupled receptors.

    abstract::Allosteric modulation of G protein-coupled receptors represent a promising mechanism of pharmacological intervention. Dramatic developments witnessed in the structural biology of membrane proteins continue to reveal that the binding sites of allosteric modulators are widely distributed, including along protein surface...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-42618-8

    authors: Wakefield AE,Mason JS,Vajda S,Keserű GM

    更新日期:2019-04-16 00:00:00

  • The intertwined metabolism during symbiotic nitrogen fixation elucidated by metabolic modelling.

    abstract::Genome-scale metabolic network models can be used for various analyses including the prediction of metabolic responses to changes in the environment. Legumes are well known for their rhizobial symbiosis that introduces nitrogen into the global nutrient cycle. Here, we describe a fully compartmentalised, mass and charg...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-30884-x

    authors: Pfau T,Christian N,Masakapalli SK,Sweetlove LJ,Poolman MG,Ebenhöh O

    更新日期:2018-08-21 00:00:00

  • Reformation of the Electron Internal Transport Barrier with the Appearance of a Magnetic Island.

    abstract::When realising future fusion reactors, their stationary burning must be maintained and the heat flux to the divertor must be reduced. This essentially requires a stationary internal transport barrier (ITB) plasma with a fast control system. However, the time scale for determining the position of the foot point of an I...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-56492-x

    authors: Kenmochi N,Minami T,Mizuuchi T,Takahashi C,Weir GM,Nishioka K,Kobayashi S,Nakamura Y,Okada H,Kado S,Yamamoto S,Ohshima S,Konoshima S,Ohtani Y,Nagasaki K

    更新日期:2020-01-08 00:00:00

  • Fine-tuning the expression of target genes using a DDI2 promoter gene switch in budding yeast.

    abstract::Tuned gene expression is crucial to the proper growth and response to the environmental changes of an organism. To enable tunable gene expression as designed is desirable in both scientific research and industrial application. Here, we introduce a novel promoter switching method based on the DDI2 promoter (PDDI2) that...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-49000-8

    authors: Wang Y,Zhang K,Li H,Xu X,Xue H,Wang P,Fu YV

    更新日期:2019-08-29 00:00:00

  • Observation of mesenteric microcirculatory disturbance in rat by laser oblique scanning optical microscopy.

    abstract::Ischemia-reperfusion (I/R) injury model has been widely applied to the study of microcirculation disturbance. In this work, we used laser oblique scanning optical microscopy (LOSOM) to observe the microcirculation system in the mesentery of rat model. Utilizing a localized point-scanning detection scheme, high-contras...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep01762

    authors: Ding Y,Zhang Y,Peng T,Lu Y,Jin D,Ren Q,Liu Y,Han J,Xi P

    更新日期:2013-01-01 00:00:00

  • Predominant role of interferon-γ in the host protective effect of CD8(+) T cells against Neospora caninum infection.

    abstract::It is well established that CD8(+) T cells play an important role in protective immunity against protozoan infections. However, their role in the course of Neospora caninum infection has not been fully elucidated. Here we report that CD8-deficient mice infected with N. caninum presented higher parasitic loads in the b...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep14913

    authors: Correia A,Ferreirinha P,Botelho S,Belinha A,Leitão C,Caramalho Í,Teixeira L,González-Fernandéz Á,Appelberg R,Vilanova M

    更新日期:2015-10-09 00:00:00

  • Chronic exposure to low doses of estradiol-17ß increases blood pressure in young female rats: A possible role for central Endothelin-1.

    abstract::Previously, we demonstrated that chronic exposure to low levels of estradiol-17β (E2) increases mean arterial pressure (MAP) in young female Sprague-Dawley (SD) rats, however, the underlying mechanisms are unclear. Since endothelin-1 (ET-1) is implicated in blood pressure (BP) regulation, we hypothesized that E2's eff...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-00213-9

    authors: Subramanian M,MohanKumar SM,Balasubramanian P,Northcott CA,Garver H,Fink GD,MohanKumar PS

    更新日期:2017-03-10 00:00:00

  • Reference genes for quantitative real-time PCR analysis in symbiont Entomomyces delphacidicola of Nilaparvata lugens (Stål).

    abstract::Nilaparvata lugens (Stål) (Hemiptera: Delphacidae) is a major rice pest that harbors an endosymbiont ascomycete fungus, Entomomyces delphacidicola str. NLU (also known as yeast-like symbiont, YLS). Driving by demand of novel population management tactics (e.g. RNAi), the importance of YLS has been studied and revealed...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep42206

    authors: Wan PJ,Tang YH,Yuan SY,He JC,Wang WX,Lai FX,Fu Q

    更新日期:2017-02-13 00:00:00

  • LPS/TLR4-mediated stromal cells acquire an invasive phenotype and are implicated in the pathogenesis of adenomyosis.

    abstract::The present study tested whether the LPS/TLR4 signal pathway in endometrial stromal cells is essential for the pathogenesis of adenomyosis. We tested the expression of TLR4, MD2 in the endometrium without adenomyosis (CE), the eutopic endometrium with adenomyosis (EuE) and the ectopic endometrium with adenomyosis (EE)...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep21416

    authors: Guo J,Chen L,Luo N,Li C,Chen R,Qu X,Liu M,Kang L,Cheng Z

    更新日期:2016-02-22 00:00:00

  • Growth hormone secretagogues hexarelin and JMV2894 protect skeletal muscle from mitochondrial damages in a rat model of cisplatin-induced cachexia.

    abstract::Chemotherapy can cause cachexia, which consists of weight loss associated with muscle atrophy. The exact mechanisms underlying this skeletal muscle toxicity are largely unknown and co-therapies to attenuate chemotherapy-induced side effects are lacking. By using a rat model of cisplatin-induced cachexia, we here chara...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-13504-y

    authors: Sirago G,Conte E,Fracasso F,Cormio A,Fehrentz JA,Martinez J,Musicco C,Camerino GM,Fonzino A,Rizzi L,Torsello A,Lezza AMS,Liantonio A,Cantatore P,Pesce V

    更新日期:2017-10-12 00:00:00

  • Neurocognitive mechanisms underlying working memory encoding and retrieval in Attention-Deficit/Hyperactivity Disorder.

    abstract::Working memory (WM) impairments in ADHD have been consistently reported along with deficits in attentional control. Yet, it is not clear which specific WM processes are affected in this condition. A deficient coupling between attention and WM has been reported. Nevertheless, most studies focus on the capacity to retai...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-64678-x

    authors: Ortega R,López V,Carrasco X,Escobar MJ,García AM,Parra MA,Aboitiz F

    更新日期:2020-05-08 00:00:00

  • Neuronal architecture of the second-order CO2 pathway in the brain of a noctuid moth.

    abstract::Many insects possess the ability to detect fine fluctuations in the environmental CO2 concentration. In herbivorous species, plant-emitted CO2, in combination with other sensory cues, affect many behaviors including foraging and oviposition. In contrast to the comprehensive knowledge obtained on the insect olfactory p...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-76918-1

    authors: Chu X,Kc P,Ian E,Kvello P,Liu Y,Wang GR,Berg BG

    更新日期:2020-11-16 00:00:00

  • The crystal structure of the Sgt1-Skp1 complex: the link between Hsp90 and both SCF E3 ubiquitin ligases and kinetochores.

    abstract::The essential cochaperone Sgt1 recruits Hsp90 chaperone activity to a range of cellular factors including SCF E3 ubiquitin ligases and the kinetochore in eukaryotes. In these pathways Sgt1 interacts with Skp1, a small protein that heterodimerizes with proteins containing the F-box motif. We have determined the crystal...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep41626

    authors: Willhoft O,Kerr R,Patel D,Zhang W,Al-Jassar C,Daviter T,Millson SH,Thalassinos K,Vaughan CK

    更新日期:2017-01-31 00:00:00

  • Strain glass state as the boundary of two phase transitions.

    abstract::A strain glass state was found to be located between B2-B19' (cubic to monoclinic) phase transition and B2-R (cubic to rhombohedral) phase transition in Ti49Ni51 alloys after aging process. After a short time aging, strong strain glass transition was observed, because the size of the precipitates is small, which means...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep13377

    authors: Zhou Z,Cui J,Ren X

    更新日期:2015-08-26 00:00:00

  • A Multiwell-Based Detection Platform with Integrated PDMS Concentrators for Rapid Multiplexed Enzymatic Assays.

    abstract::We report an integrated system for accelerating assays with concentrators in a standard 12-well plate (ISAAC-12) and demonstrate its versatility for rapid detection of matrix metalloproteinase (MMP)-9 expression in the cell culture supernatant of breast cancer cell line MDA-MB-231 by accelerating the enzymatic reactio...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-29065-7

    authors: Wei X,Do VQ,Pham SV,Martins D,Song YA

    更新日期:2018-07-17 00:00:00

  • Characterization of efficiency-limiting resistance losses in monolithically integrated Cu(In,Ga)Se2 solar modules.

    abstract::The cell-to-module efficiency gap in Cu(In,Ga)Se2 (CIGS) monolithically integrated solar modules is enhanced by contact resistance between the Al-doped ZnO (AZO) and Mo back contact layers, the P2 contact, which connects adjacent cells. The present work evaluated the P2 contact resistance, in addition to the TCO resis...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep07690

    authors: Yoon JH,Park JK,Kim WM,Lee J,Pak H,Jeong JH

    更新日期:2015-01-09 00:00:00

  • Complete genome sequence of the cellulose-producing strain Komagataeibacter nataicola RZS01.

    abstract::Komagataeibacter nataicola is an acetic acid bacterium (AAB) that can produce abundant bacterial cellulose and tolerate high concentrations of acetic acid. To globally understand its fermentation characteristics, we present a high-quality complete genome sequence of K. nataicola RZS01. The genome consists of a 3,485,1...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-04589-6

    authors: Zhang H,Xu X,Chen X,Yuan F,Sun B,Xu Y,Yang J,Sun D

    更新日期:2017-06-30 00:00:00

  • Tempered mlo broad-spectrum resistance to barley powdery mildew in an Ethiopian landrace.

    abstract::Recessive mutations in the Mlo gene confer broad spectrum resistance in barley (Hordeum vulgare) to powdery mildew (Blumeria graminis f. sp. hordei), a widespread and damaging disease. However, all alleles discovered to date also display deleterious pleiotropic effects, including the naturally occurring mlo-11 mutant ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep29558

    authors: Ge X,Deng W,Lee ZZ,Lopez-Ruiz FJ,Schweizer P,Ellwood SR

    更新日期:2016-07-12 00:00:00

  • Author Correction: Specific Phospholipids Regulate the Acquisition of Neuronal and Astroglial Identities in Post-Mitotic Cells.

    abstract::An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-019-55787-3

    authors: Montaner A,da Silva Santana TT,Schroeder T,Einicker-Lamas M,Girardini J,Costa MR,Banchio C

    更新日期:2019-12-24 00:00:00

  • Expression and Transcriptional Regulation of Human ATP6V1A Gene in Gastric Cancers.

    abstract::Recent studies demonstrate that the invasion and metastasis of gastric cancer (GC) is closely associated with a multi-subunit vacuolar H+-ATPase (V-ATPase). Here we investigated the expression and role of the human ATP6V1A gene that encodes the catalytic subunit A of V-ATPase in GC. We found that ATP6V1A expression le...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-03021-3

    authors: Wang P,Wang L,Sha J,Lou G,Lu N,Hang B,Mao JH,Zou X

    更新日期:2017-06-07 00:00:00

  • Association between maternal blood lipids levels during pregnancy and risk of small-for-gestational-age infants.

    abstract::Dyslipidemia in pregnancy are associated with risk of adverse outcomes. As an adverse pregnancy outcome, small-for-gestational-age has been extensively studied in Western countries. However, similar studies have rarely been conducted in Asian countries. Data were derived from 5695 pairs of non-diabetic mothers and neo...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-76845-1

    authors: Chen Q,Chen H,Xi F,Sagnelli M,Zhao B,Chen Y,Yang M,Xu D,Jiang Y,Chen G,Luo Q

    更新日期:2020-11-16 00:00:00

  • First fossil frog from Antarctica: implications for Eocene high latitude climate conditions and Gondwanan cosmopolitanism of Australobatrachia.

    abstract::Cenozoic ectothermic continental tetrapods (amphibians and reptiles) have not been documented previously from Antarctica, in contrast to all other continents. Here we report a fossil ilium and an ornamented skull bone that can be attributed to the Recent, South American, anuran family Calyptocephalellidae or helmeted ...

    journal_title:Scientific reports

    pub_type: 历史文章,杂志文章

    doi:10.1038/s41598-020-61973-5

    authors: Mörs T,Reguero M,Vasilyan D

    更新日期:2020-04-23 00:00:00

  • Recurrent water deficit causes epigenetic and hormonal changes in citrus plants.

    abstract::The present study evaluated the physiological, molecular and hormonal parameters from scion/rootstock interaction of citrus plants during recurrent water deficit. Responses of the Valencia (VO) scion variety grafted on two rootstocks with different soil water extraction capacities, Rangpur Lime (RL) and Sunki Maravilh...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-14161-x

    authors: Neves DM,Almeida LADH,Santana-Vieira DDS,Freschi L,Ferreira CF,Soares Filho WDS,Costa MGC,Micheli F,Coelho Filho MA,Gesteira ADS

    更新日期:2017-10-20 00:00:00