Complete genome sequence and phylogenetic analysis of Senecavirus A isolated in Northeast China in 2016.

Abstract:

:Senecavirus A (SVA) is associated with vesicular disease in swine and the acute death of neonatal piglets. Here, senecavirus A was isolated from a pig displaying vesicular disease in Northeast China. The virus was designated as SVA/HLJ/CHA/2016 and its full-length nucleotide sequence was determined and analyzed in comparison with other known SVA strains. The complete genome sequence of SVA/HLJ/CHA/2016 shares high nucleotide identities, of 93.8 to 99%, with previously reported SVA full-length genomes. Phylogenetic analysis of both the SVA full-length genomes and the VP1 genes revealed that the SVA/HLJ/CHA/2016 strain is closely related to the 2015 US strains, instead of other China isolates. Our finding provides evidence that SVA infection of pigs has occurred in Northeast China, and the importance of SVA surveillance in China should be emphasized.

journal_name

Arch Virol

journal_title

Archives of virology

authors

Wang H,Li C,Zhao B,Yuan T,Yang D,Zhou G,Yu L

doi

10.1007/s00705-017-3480-4

subject

Has Abstract

pub_date

2017-10-01 00:00:00

pages

3173-3176

issue

10

eissn

0304-8608

issn

1432-8798

pii

10.1007/s00705-017-3480-4

journal_volume

162

pub_type

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