An alternative conformation of ERβ bound to estradiol reveals H12 in a stable antagonist position.

Abstract:

:The natural ligand 17β-estradiol (E2) is so far believed to induce a unique agonist-bound active conformation in the ligand binding domain (LBD) of the estrogen receptors (ERs). Both subtypes, ERα and ERβ, are transcriptionally activated in the presence of E2 with ERβ being somewhat less active than ERα under similar conditions. The molecular bases for this intriguing behavior are mainly attributed to subtype differences in the amino-terminal domain of these receptors. However, structural details that confer differences in the molecular response of ER LBDs to E2 still remain elusive. In this study, we present a new crystallographic structure of the ERβ LBD bound to E2 in which H12 assumes an alternative conformation that resembles antagonist ERs structures. Structural observations and molecular dynamics simulations jointly provide evidence that alternative ERβ H12 position could correspond to a stable conformation of the receptor under physiological pH conditions. Our findings shed light on the unexpected role of LBD in the lower functional response of ERβ subtype.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Souza PCT,Textor LC,Melo DC,Nascimento AS,Skaf MS,Polikarpov I

doi

10.1038/s41598-017-03774-x

subject

Has Abstract

pub_date

2017-06-14 00:00:00

pages

3509

issue

1

issn

2045-2322

pii

10.1038/s41598-017-03774-x

journal_volume

7

pub_type

杂志文章
  • Structure, function, and inhibition of drug reactivating human gut microbial β-glucuronidases.

    abstract::Bacterial β-glucuronidase (GUS) enzymes cause drug toxicity by reversing Phase II glucuronidation in the gastrointestinal tract. While many human gut microbial GUS enzymes have been examined with model glucuronide substrates like p-nitrophenol-β-D-glucuronide (pNPG), the GUS orthologs that are most efficient at proces...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-36069-w

    authors: Biernat KA,Pellock SJ,Bhatt AP,Bivins MM,Walton WG,Tran BNT,Wei L,Snider MC,Cesmat AP,Tripathy A,Erie DA,Redinbo MR

    更新日期:2019-01-29 00:00:00

  • A comparison study of radiation effective dose in ECG-Gated Coronary CT Angiography and calcium scoring examinations performed with a dual-source CT scanner.

    abstract::In this report we have evaluated radiation effective dose received by patients during ECG-gated CCTA examinations based on gender, heart rate, tube voltage protocol and body mass index (BMI). A total of 1,824 patients were retrospectively recruited (1,139 men and 685 women) and they were divided into Group 1 (CCTA wit...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-40758-5

    authors: Sabarudin A,Siong TW,Chin AW,Hoong NK,Karim MKA

    更新日期:2019-03-13 00:00:00

  • Author Correction: Signal quality of simultaneously recorded endovascular, subdural and epidural signals are comparable.

    abstract::A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has not been fixed in the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-018-36257-8

    authors: John SE,Opie NL,Wong YT,Rind GS,Ronayne SM,Gerboni G,Bauquier SH,O'Brien TJ,May CN,Grayden DB,Oxley TJ

    更新日期:2018-11-27 00:00:00

  • Retinal Vascular Density as A Novel Biomarker of Acute Renal Injury after Acute Coronary Syndrome.

    abstract::Iodinated contrast agent (ICA)-induced acute kidney injury (AKI) following acute coronary syndrome (ACS) is a frequent complication, which may lead to chronic kidney disease and increased mortality. Optical coherence tomography angiography (OCT-A) of the retina is new tool delivering a rapid and noninvasive assessment...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-44647-9

    authors: Alan G,Guenancia C,Arnould L,Azemar A,Pitois S,Maza M,Bichat F,Zeller M,Gabrielle PH,Bron AM,Creuzot-Garcher C,Cottin Y

    更新日期:2019-05-30 00:00:00

  • Incorporating hybrid models into lysine malonylation sites prediction on mammalian and plant proteins.

    abstract::Protein malonylation, a reversible post-translational modification of lysine residues, is associated with various biological functions, such as cellular regulation and pathogenesis. In proteomics, to improve our understanding of the mechanisms of malonylation at the molecular level, the identification of malonylation ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-67384-w

    authors: Chung CR,Chang YP,Hsu YL,Chen S,Wu LC,Horng JT,Lee TY

    更新日期:2020-06-29 00:00:00

  • Control strategies of 3-cell Central Pattern Generator via global stimuli.

    abstract::The study of the synchronization patterns of small neuron networks that control several biological processes has become an interesting growing discipline. Some of these synchronization patterns of individual neurons are related to some undesirable neurological diseases, and they are believed to play a crucial role in ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep23622

    authors: Lozano Á,Rodríguez M,Barrio R

    更新日期:2016-03-29 00:00:00

  • Improving the surface properties of an UHMWPE shoulder implant with an atmospheric pressure plasma jet.

    abstract::Insufficient glenoid fixation is one of the main reasons for failure in total shoulder arthroplasty. This is predominantly caused by the inert nature of the ultra-high molecular weight polyethylene (UHMWPE) used in the glenoid component of the implant, which makes it difficult to adhesively bind to bone cement or bone...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-22921-6

    authors: Van Vrekhem S,Vloebergh K,Asadian M,Vercruysse C,Declercq H,Van Tongel A,De Wilde L,De Geyter N,Morent R

    更新日期:2018-03-16 00:00:00

  • Developing an in silico minimum inhibitory concentration panel test for Klebsiella pneumoniae.

    abstract::Antimicrobial resistant infections are a serious public health threat worldwide. Whole genome sequencing approaches to rapidly identify pathogens and predict antibiotic resistance phenotypes are becoming more feasible and may offer a way to reduce clinical test turnaround times compared to conventional culture-based m...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-18972-w

    authors: Nguyen M,Brettin T,Long SW,Musser JM,Olsen RJ,Olson R,Shukla M,Stevens RL,Xia F,Yoo H,Davis JJ

    更新日期:2018-01-11 00:00:00

  • Antimicrobial and anti-inflammatory activities of three chensinin-1 peptides containing mutation of glycine and histidine residues.

    abstract::The natural peptide chensinin-1 doesnot exhibit its desired biological properties. In this study, the mutant MC1-1 was designed by replacing Gly in the chensinin-1 sequence with Trp. Mutants MC1-2 and MC1-3 were designed based on the MC1-1 sequence to investigate the specific role of His residues. The mutated peptides...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep40228

    authors: Dong W,Mao X,Guan Y,Kang Y,Shang D

    更新日期:2017-01-05 00:00:00

  • Atypical age-related changes in cortical thickness in autism spectrum disorder.

    abstract::Recent longitudinal neuroimaging and neurophysiological studies have shown that tracking relative age-related changes in neural signals, rather than a static snapshot of a neural measure, could offer higher sensitivity for discriminating typically developing (TD) individuals from those with autism spectrum disorder (A...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-67507-3

    authors: Nunes AS,Vakorin VA,Kozhemiako N,Peatfield N,Ribary U,Doesburg SM

    更新日期:2020-07-06 00:00:00

  • Evaluation of genetic association of the INK4 locus with primary open angle glaucoma in East Indian population.

    abstract::INK4 locus at chromosome 9p21 has been reported to be associated with primary open angle glaucoma (POAG) and its subtypes along with the associated optic disc parameters across the populations of European, Japanese and African ancestries. The locus encodes three tumor suppressor genes namely CDKN2A, ARF, CDKN2B and a ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep05115

    authors: Vishal M,Sharma A,Kaurani L,Chakraborty S,Ray J,Sen A,Mukhopadhyay A,Ray K

    更新日期:2014-05-30 00:00:00

  • Microbial structure and function in infant and juvenile rhesus macaques are primarily affected by age, not vaccination status.

    abstract::Although thimerosal, an ethylmercury-based preservative, has been removed from most pediatric vaccines in the United States, some multidose vaccines, such as influenza vaccines, still contain thimerosal. Considering that a growing number of studies indicate involvement of the gut microbiome in infant immune developmen...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-34019-0

    authors: Hasegawa Y,Curtis B,Yutuc V,Rulien M,Morrisroe K,Watkins K,Ferrier C,English C,Hewitson L,Slupsky CM

    更新日期:2018-10-26 00:00:00

  • Metabolic phenotypes and the gut microbiota in response to dietary resistant starch type 2 in normal-weight subjects: a randomized crossover trial.

    abstract::Resistant starch (RS) has been reported to reduce body fat in obese mice. However, this effect has not been demonstrated in humans. In this study, we tested the effects of RS in 19 volunteers with normal body weights. A randomized, double-blinded and crossover design clinical trial was conducted. The study subjects we...

    journal_title:Scientific reports

    pub_type: 杂志文章,随机对照试验

    doi:10.1038/s41598-018-38216-9

    authors: Zhang L,Ouyang Y,Li H,Shen L,Ni Y,Fang Q,Wu G,Qian L,Xiao Y,Zhang J,Yin P,Panagiotou G,Xu G,Ye J,Jia W

    更新日期:2019-03-20 00:00:00

  • S100A8 promotes migration and infiltration of inflammatory cells in acute anterior uveitis.

    abstract::Uveitis, the pathologic condition of inflammation of the uvea, frequently leads to severe vision loss and blindness. S100A8 is a calcium-binding protein which mainly expresses in granulocytes and monocytes and plays a prominent role in the regulation of inflammatory processes and immune response. Here, we determined t...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep36140

    authors: Wang Y,Zhang Z,Zhang L,Li X,Lu R,Xu P,Zhang X,Dai M,Dai X,Qu J,Lu F,Chi Z

    更新日期:2016-10-27 00:00:00

  • One-domain CD4 Fused to Human Anti-CD16 Antibody Domain Mediates Effective Killing of HIV-1-Infected Cells.

    abstract::Bispecific killer cells engagers (BiKEs) which can bind to natural killer (NK) cells through the activating receptor CD16A and guide them to cells expressing the HIV-1 envelope glycoprotein (Env) are a promising new weapon for elimination of infected cells and eradication of the virus. Here we report the design, gener...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-07966-3

    authors: Li W,Wu Y,Kong D,Yang H,Wang Y,Shao J,Feng Y,Chen W,Ma L,Ying T,Dimitrov DS

    更新日期:2017-08-22 00:00:00

  • Diversity of P1 phage-like elements in multidrug resistant Escherichia coli.

    abstract::The spread of multidrug resistance via mobile genetic elements is a major clinical and veterinary concern. Pathogenic Escherichia coli harbour antibiotic resistance and virulence genes mainly on plasmids, but also bacteriophages and hybrid phage-like plasmids. In this study, the genomes of three E. coli phage-like pla...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-54895-4

    authors: Venturini C,Zingali T,Wyrsch ER,Bowring B,Iredell J,Partridge SR,Djordjevic SP

    更新日期:2019-12-11 00:00:00

  • Comparison of Species Composition and Floristic Components of Soil Sediment Spore pollen in the Ailaoshan Mountain Forest of China.

    abstract::As the natural boundary between the Yunnan-Guizhou Plateau and the Hengduan Mountains in China, the large-scale prominent terrain of Ailaoshan Mountain leads to obvious regional differences in climate and vegetation. In this article, a comparative analysis is made on both species composition and floristic components o...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-48324-9

    authors: He SN,Hao CY,Zhao W

    更新日期:2019-08-19 00:00:00

  • Elastase levels and activity are increased in dystrophic muscle and impair myoblast cell survival, proliferation and differentiation.

    abstract::In Duchenne muscular dystrophy, progressive loss of muscle tissue is accompanied by fibrosis, chronic inflammation and reduced muscle regenerative capacity. Although much is known about the development of fibrosis and chronic inflammation in muscular dystrophy, less is known about how they are mechanistically linked t...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep24708

    authors: Arecco N,Clarke CJ,Jones FK,Simpson DM,Mason D,Beynon RJ,Pisconti A

    更新日期:2016-05-31 00:00:00

  • Increased diversity of egg-associated bacteria on brown trout (Salmo trutta) at elevated temperatures.

    abstract::The taxonomic composition of egg-associated microbial communities can play a crucial role in the development of fish embryos. In response, hosts increasingly influence the composition of their associated microbial communities during embryogenesis, as concluded from recent field studies and laboratory experiments. Howe...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep17084

    authors: Wilkins LG,Rogivue A,Schütz F,Fumagalli L,Wedekind C

    更新日期:2015-11-27 00:00:00

  • From homogeneous to heterogeneous network alignment via colored graphlets.

    abstract::Network alignment (NA) compares networks with the goal of finding a node mapping that uncovers highly similar (conserved) network regions. Existing NA methods are homogeneous, i.e., they can deal only with networks containing nodes and edges of one type. Due to increasing amounts of heterogeneous network data with nod...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-30831-w

    authors: Gu S,Johnson J,Faisal FE,Milenković T

    更新日期:2018-08-21 00:00:00

  • Vitamin D deficiency, cardiothoracic ratio, and long-term mortality in hemodialysis patients.

    abstract::Hemodialysis patients are a special group of patients with higher mortality rates. Hemodialysis patients with vitamin D deficiency {plasma levels of 25-hydroxyvitamin D [25(OH)D] below 20 ng/mL} are associated with even higher mortality rates. The prognostic importance of vitamin D deficiency in hemodialysis patients ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-64359-9

    authors: Hsu HJ,Wu IW,Hsu KH,Sun CY,Chen CY,Lee CC

    更新日期:2020-05-05 00:00:00

  • Silicon-core glass fibres as microwire radial-junction solar cells.

    abstract::Vertically aligned radial-junction solar cell designs offer potential improvements over planar geometries, as carrier generation occurs close to the junction for all absorption depths, but most production methods still require a single crystal substrate. Here, we report on the fabrication of such solar cells from poly...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep06283

    authors: Martinsen FA,Smeltzer BK,Nord M,Hawkins T,Ballato J,Gibson UJ

    更新日期:2014-09-04 00:00:00

  • Erratum: OncoScore: a novel, Internet-based tool to assess the oncogenic potential of genes.

    abstract::This corrects the article DOI: 10.1038/srep46290. ...

    journal_title:Scientific reports

    pub_type: 杂志文章,已发布勘误

    doi:10.1038/srep46823

    authors: Piazza R,Ramazzotti D,Spinelli R,Pirola A,De Sano L,Ferrari P,Magistroni V,Cordani N,Sharma N,Gambacorti-Passerini C

    更新日期:2017-05-22 00:00:00

  • Comparative analysis of the genomes of Stylophora pistillata and Acropora digitifera provides evidence for extensive differences between species of corals.

    abstract::Stony corals form the foundation of coral reef ecosystems. Their phylogeny is characterized by a deep evolutionary divergence that separates corals into a robust and complex clade dating back to at least 245 mya. However, the genomic consequences and clade-specific evolution remain unexplored. In this study we have pr...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-17484-x

    authors: Voolstra CR,Li Y,Liew YJ,Baumgarten S,Zoccola D,Flot JF,Tambutté S,Allemand D,Aranda M

    更新日期:2017-12-14 00:00:00

  • Machine learning as an improved estimator for magnetization curve and spin gap.

    abstract::The magnetization process is a very important probe to study magnetic materials, particularly in search of spin-liquid states in quantum spin systems. Regrettably, however, progress of the theoretical analysis has been unsatisfactory, mostly because it is hard to obtain sufficient numerical data to support the theory....

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-70389-0

    authors: Nakamura T

    更新日期:2020-08-26 00:00:00

  • Up-regulation of casein kinase 1ε is involved in tau pathogenesis in Alzheimer's disease.

    abstract::Hyperphosphorylation of tau and imbalanced expression of 3R-tau and 4R-tau as a result of dysregulation of tau exon 10 splicing are believed to be pivotal to the pathogenesis of tau pathology, but the molecular mechanism leading to the pathologic tau formation in Alzheimer's disease (AD) brain is not fully understood....

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-13791-5

    authors: Chen C,Gu J,Basurto-Islas G,Jin N,Wu F,Gong CX,Iqbal K,Liu F

    更新日期:2017-10-18 00:00:00

  • The electronic, structural and magnetic properties of La(1-1/3)Sr(1/3)MnO3 film with oxygen vacancy: a first principles investigation.

    abstract::We have systematically investigated the influence of oxygen vacancy defects on the structural, electronic and magnetic properties of La(1-x)Sr(x)MnO3 (x = 1/3) film by means of ab initio calculations using bare GGA as well as GGA+U formalism, in the latter of which, the on-site Coulombic repulsion parameter U for Mn 3...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep22422

    authors: Li J

    更新日期:2016-03-01 00:00:00

  • A suicide inhibitor of nematode trehalose-6-phosphate phosphatases.

    abstract::Protein-based drug discovery strategies have the distinct advantage of providing insights into the molecular mechanisms of chemical effectors. Currently, there are no known trehalose-6-phosphate phosphatase (TPP) inhibitors that possess reasonable inhibition constants and chemical scaffolds amenable to convenient modi...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-52593-9

    authors: Cross M,York M,Długosz E,Straub JH,Biberacher S,Herath HMPD,Logan SA,Kim JS,Gasser RB,Ryan JH,Hofmann A

    更新日期:2019-11-07 00:00:00

  • The structural characterization of a polysaccharide exhibiting antitumor effect from Pholiota adiposa mycelia.

    abstract::PAP80-2a, purified from Pholiota adiposa mycelia, is a polysaccharide exhibiting prominent antitumor effects. However, the yield of PAP80-2a was low and its structure has not been characterized, impeding the exploration of its structure-function relationship, thus influencing the development of oral drugs for antitumo...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-38251-6

    authors: Zou Y,Du F,Hu Q,Wang H

    更新日期:2019-02-11 00:00:00

  • Association between chemerin, omentin-1 and risk of heart failure in the population-based EPIC-Potsdam study.

    abstract::The adipokines chemerin and omentin-1 have been suggested to influence cardiovascular function. The study aimed to investigate the longitudinal association between chemerin, omentin-1 concentrations and risk of incident heart failure (HF), respectively. We conducted a case-cohort study nested within the European Prosp...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-14518-2

    authors: Menzel J,di Giuseppe R,Biemann R,Wittenbecher C,Aleksandrova K,Eichelmann F,Fritsche A,Schulze MB,Boeing H,Isermann B,Weikert C

    更新日期:2017-10-26 00:00:00