The RNAi Inheritance Machinery of Caenorhabditis elegans.

Abstract:

:Gene silencing mediated by dsRNA (RNAi) can persist for multiple generations in Caenorhabditis elegans (termed RNAi inheritance). Here we describe the results of a forward genetic screen in C. elegans that has identified six factors required for RNAi inheritance: GLH-1/VASA, PUP-1/CDE-1, MORC-1, SET-32, and two novel nematode-specific factors that we term here (heritable RNAi defective) HRDE-2 and HRDE-4 The new RNAi inheritance factors exhibit mortal germline (Mrt) phenotypes, which we show is likely caused by epigenetic deregulation in germ cells. We also show that HRDE-2 contributes to RNAi inheritance by facilitating the binding of small RNAs to the inheritance Argonaute (Ago) HRDE-1 Together, our results identify additional components of the RNAi inheritance machinery whose conservation provides insights into the molecular mechanism of RNAi inheritance, further our understanding of how the RNAi inheritance machinery promotes germline immortality, and show that HRDE-2 couples the inheritance Ago HRDE-1 with the small RNAs it needs to direct RNAi inheritance and germline immortality.

journal_name

Genetics

journal_title

Genetics

authors

Spracklin G,Fields B,Wan G,Becker D,Wallig A,Shukla A,Kennedy S

doi

10.1534/genetics.116.198812

subject

Has Abstract

pub_date

2017-07-01 00:00:00

pages

1403-1416

issue

3

eissn

0016-6731

issn

1943-2631

pii

genetics.116.198812

journal_volume

206

pub_type

杂志文章

相关文献

GENETICS文献大全
  • Inference of Distribution of Fitness Effects and Proportion of Adaptive Substitutions from Polymorphism Data.

    abstract::The distribution of fitness effects (DFE) encompasses the fraction of deleterious, neutral, and beneficial mutations. It conditions the evolutionary trajectory of populations, as well as the rate of adaptive molecular evolution (α). Inferring DFE and α from patterns of polymorphism, as given through the site frequency...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.117.300323

    authors: Tataru P,Mollion M,Glémin S,Bataillon T

    更新日期:2017-11-01 00:00:00

  • Control of Development, Secondary Metabolism and Light-Dependent Carotenoid Biosynthesis by the Velvet Complex of Neurospora crassa.

    abstract::Neurospora crassa is an established reference organism to investigate carotene biosynthesis and light regulation. However, there is little evidence of its capacity to produce secondary metabolites. Here, we report the role of the fungal-specific regulatory velvet complexes in development and secondary metabolism (SM) ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.119.302277

    authors: Bayram ÖS,Dettmann A,Karahoda B,Moloney NM,Ormsby T,McGowan J,Cea-Sánchez S,Miralles-Durán A,Brancini GTP,Luque EM,Fitzpatrick DA,Cánovas D,Corrochano LM,Doyle S,Selker EU,Seiler S,Bayram Ö

    更新日期:2019-07-01 00:00:00

  • Meiotic chromosome dynamics dependent upon the rec8(+), rec10(+) and rec11(+) genes of the fission yeast Schizosaccharomyces pombe.

    abstract::During meiosis homologous chromosomes replicate once, pair, experience recombination, and undergo two rounds of segregation to produce haploid meiotic products. The rec8(+), rec10(+), and rec11(+) genes of the fission yeast Schizosaccharomyces pombe exhibit similar specificities for meiotic recombination and rec8(+) i...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Krawchuk MD,DeVeaux LC,Wahls WP

    更新日期:1999-09-01 00:00:00

  • Major effects on teratogen-induced facial clefting in mice determined by a single genetic region.

    abstract::A major correlation has been found between the incidence of glucocorticoid-induced cleft palate and the chromosome 8 segment identified by N-acetyl transferase in mice. The resistant strain became fully susceptible while the susceptible strain became resistant when this chromosomal region, representing less than 0.7% ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Karolyi J,Erickson RP,Liu S,Killewald L

    更新日期:1990-09-01 00:00:00

  • Screens for piwi suppressors in Drosophila identify dosage-dependent regulators of germline stem cell division.

    abstract::The Drosophila piwi gene is the founding member of the only known family of genes whose function in stem cell maintenance is highly conserved in both animal and plant kingdoms. piwi mutants fail to maintain germline stem cells in both male and female gonads. The identification of piwi-interacting genes is essential fo...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Smulders-Srinivasan TK,Lin H

    更新日期:2003-12-01 00:00:00

  • Nucleoporin FG domains facilitate mRNP remodeling at the cytoplasmic face of the nuclear pore complex.

    abstract::Directional export of messenger RNA (mRNA) protein particles (mRNPs) through nuclear pore complexes (NPCs) requires multiple factors. In Saccharomyces cerevisiae, the NPC proteins Nup159 and Nup42 are asymmetrically localized to the cytoplasmic face and have distinct functional domains: a phenylalanine-glycine (FG) re...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.114.164012

    authors: Adams RL,Terry LJ,Wente SR

    更新日期:2014-08-01 00:00:00

  • Statistical tests of neutrality of mutations.

    abstract::Mutations in the genealogy of the sequences in a random sample from a population can be classified as external and internal. External mutations are mutations that occurred in the external branches and internal mutations are mutations that occurred in the internal branches of the genealogy. Under the assumption of sele...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Fu YX,Li WH

    更新日期:1993-03-01 00:00:00

  • Assessing gene-environment interactions for common and rare variants with binary traits using gene-trait similarity regression.

    abstract::Accounting for gene-environment (G×E) interactions in complex trait association studies can facilitate our understanding of genetic heterogeneity under different environmental exposures, improve the ability to discover susceptible genes that exhibit little marginal effect, provide insight into the biological mechanism...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.114.171686

    authors: Zhao G,Marceau R,Zhang D,Tzeng JY

    更新日期:2015-03-01 00:00:00

  • Nonclassical regulation of transcription: interchromosomal interactions at the malic enzyme locus of Drosophila melanogaster.

    abstract::Regulation of transcription can be a complex process in which many cis- and trans-interactions determine the final pattern of expression. Among these interactions are trans-interactions mediated by the pairing of homologous chromosomes. These trans-effects are wide ranging, affecting gene regulation in many species an...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.111.133231

    authors: Lum TE,Merritt TJ

    更新日期:2011-11-01 00:00:00

  • Mutations in GCR3, a gene involved in the expression of glycolytic genes in Saccharomyces cerevisiae, suppress the temperature-sensitive growth of hpr1 mutants.

    abstract::To study the functions of DNA topoisomerase I and Hpr1 protein, a suppressor mutant of the temperature-sensitive growth of an hpr1 top1-5ts double mutant was isolated. The isolated triple mutant showed cold-sensitive growth. By complementation of this phenotype, the suppressor gene was cloned. DNA sequencing showed it...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Uemura H,Pandit S,Jigami Y,Sternglanz R

    更新日期:1996-04-01 00:00:00

  • Precocious S-phase entry in budding yeast prolongs replicative state and increases dependence upon Rad53 for viability.

    abstract::Precocious entry into S phase due to overproduction of G1 regulators can cause genomic instability. The mechanisms of this phenomenon are largely unknown. We explored the consequences of precocious S phase in yeast by overproducing a deregulated form of Swi4 (Swi4-t). Swi4 is a late G1-specific transcriptional activat...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Sidorova JM,Breeden LL

    更新日期:2002-01-01 00:00:00

  • Microgeographic differentiation of chromosomal and enzyme polymorphisms in Drosophila persimilis.

    abstract::We studied microgeographic and temporal genetic differentiation in natural populations of Drosophila persimilis with respect to chromosome inversion and enzyme polymorphisms. Both inversion frequencies and allozyme frequencies varied significantly over short distances. Neither differed significantly between morning an...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Taylor CE,Powell JR

    更新日期:1977-04-01 00:00:00

  • Isolation of dominant XO-feminizing mutations in Caenorhabditis elegans: new regulatory tra alleles and an X chromosome duplication with implications for primary sex determination.

    abstract::A strain of Caenorhabditis elegans was constructed that permits selection of dominant or sex-linked mutations that transform XO animals (normally male) into fertile females, using a feminizing mutation, tra-2(e2046gf), which by itself does not sexually transform XO males. Twenty-three mutations were isolated after che...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Hodgkin J,Albertson DG

    更新日期:1995-10-01 00:00:00

  • The cytoplasmic end of transmembrane domain 3 regulates the activity of the Saccharomyces cerevisiae G-protein-coupled alpha-factor receptor.

    abstract::The binding of alpha-factor to its receptor (Ste2p) activates a G-protein-signaling pathway leading to conjugation of MATa cells of the budding yeast S. cerevisiae. We conducted a genetic screen to identify constitutively activating mutations in the N-terminal region of the alpha-factor receptor that includes transmem...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Parrish W,Eilers M,Ying W,Konopka JB

    更新日期:2002-02-01 00:00:00

  • Cell excitability necessary for male mating behavior in Caenorhabditis elegans is coordinated by interactions between big current and ether-a-go-go family K(+) channels.

    abstract::Variations in K(+) channel composition allow for differences in cell excitability and, at an organismal level, provide flexibility to behavioral regulation. When the function of a K(+) channel is disrupted, the remaining K(+) channels might incompletely compensate, manifesting as abnormal organismal behavior. In this ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.111.137455

    authors: LeBoeuf B,Garcia LR

    更新日期:2012-03-01 00:00:00

  • Evidence for regulatory variants of the dopa decarboxylase and alpha-methyldopa hypersensitive loci in Drosophila.

    abstract::We have analyzed two variants of Drosophila melanogaster (RS and RE) which lead to the dual phenotype of elevated DDC activity and increased resistance to dietary alpha-methyldopa relative to Oregon-R controls. Both phenotypes show tight genetic linkage to the dopa decarboxylase, Ddc, and l(2)amd genes (i.e., less tha...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Marsh JL,Wright TR

    更新日期:1986-02-01 00:00:00

  • Genetic effects of acute spermatogonial X-irradiation of the laboratory rat.

    abstract::The genetic effects of one generation of spermatogonial X-irradiation in rats, by a single dose of 600r in one experiment and by a fractionated dose of 450r in another, were measured in three generations of their descendants. Estimates of dominant lethal mutation rates--(2 to 3) X 10-4/gamete/r--from litter size diffe...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Chambers JR,Chapman AB

    更新日期:1977-02-01 00:00:00

  • Synaptic adjustment of inversion loops in Neurospora crassa.

    abstract::Heterozygotes for three long inversions on chromosome 1 were analyzed by serial reconstruction from electron micrographs. Measurements of loop lengths at different meiotic prophase substages revealed that the homologous synapsis of the inverted region was gradually replaced by nonhomologous synapsis as loops were elim...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Bojko M

    更新日期:1990-03-01 00:00:00

  • Regulation of Cell-to-Cell Communication and Cell Wall Integrity by a Network of MAP Kinase Pathways and Transcription Factors in Neurospora crassa.

    abstract::Maintenance of cell integrity and cell-to-cell communication are fundamental biological processes. Filamentous fungi, such as Neurospora crassa, depend on communication to locate compatible cells, coordinate cell fusion, and establish a robust hyphal network. Two MAP kinase (MAPK) pathways are essential for communicat...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.118.300904

    authors: Fischer MS,Wu VW,Lee JE,O'Malley RC,Glass NL

    更新日期:2018-06-01 00:00:00

  • Mechanisms of mutagenesis by a bulky DNA lesion at the guanine N7 position.

    abstract::In order to examine the mechanisms of mutagenesis by a bulky DNA lesion at the guanine N7 position, the replicative form DNA of phage M13AB28 (mp8 without the amber codons in phage genes) was modified in vitro with aflatoxin B1-2,3-dichloride and transfected into appropriate Escherichia coli cells. Forward mutations i...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Sambamurti K,Callahan J,Luo X,Perkins CP,Jacobsen JS,Humayun MZ

    更新日期:1988-12-01 00:00:00

  • Cladistic structure within the human Lipoprotein lipase gene and its implications for phenotypic association studies.

    abstract::Haplotype variation in 9.7 kb of genomic DNA sequence from the human lipoprotein lipase (LPL) gene was scored in three populations: African-Americans from Jackson, Mississippi (24 individuals), Finns from North Karelia, Finland (24), and non-Hispanic whites from Rochester, Minnesota (23). Earlier analyses had indicate...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Templeton AR,Weiss KM,Nickerson DA,Boerwinkle E,Sing CF

    更新日期:2000-11-01 00:00:00

  • Comparative analysis of position-effect variegation mutations in Drosophila melanogaster delineates the targets of modifiers.

    abstract::In Drosophila melanogaster, heterochromatin-induced silencing or position-effect variegation (PEV) of a reporter gene has provided insights into the properties of heterochromatin. Class I modifiers suppress PEV, and class II modifiers enhance PEV when the modifier gene is present in fewer than two doses. We have exami...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Sass GL,Henikoff S

    更新日期:1998-02-01 00:00:00

  • Identification and analysis of mutations in bob, Doa and eight new genes required for oocyte specification and development in Drosophila melanogaster.

    abstract::The Drosophila oocyte develops from a cluster of 16 interconnected cells that derive from a common progenitor. One of these cells, the oocyte, arrests in meiosis. The other cells endoreplicate their DNA and produce mRNAs and proteins that they traffic to the oocyte along a polarized microtubule cytoskeleton shared by ...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Morris JZ,Navarro C,Lehmann R

    更新日期:2003-08-01 00:00:00

  • The Role of Maternal HP1a in Early Drosophila Embryogenesis via Regulation of Maternal Transcript Production.

    abstract::Heterochromatin protein 1a (HP1a) is a highly conserved and versatile epigenetic factor that can both silence and activate transcription. However, the function of HP1a in development has been underinvestigated. Here, we report the role of maternal HP1a in producing maternal transcripts that drive early Drosophila embr...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.118.301704

    authors: Park AR,Liu N,Neuenkirchen N,Guo Q,Lin H

    更新日期:2019-01-01 00:00:00

  • Targeted Gene Disruption by Ectopic Induction of DNA Elimination in Tetrahymena.

    abstract::Tetrahymena is a useful eukaryotic model for biochemistry and molecular cell biology studies. We previously demonstrated that targeted ectopic DNA elimination, also called co-Deletion (coDel), can be induced by the introduction of an internal eliminated sequence (IES)-target DNA chimeric construct. In this study, we d...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.115.178525

    authors: Hayashi A,Mochizuki K

    更新日期:2015-09-01 00:00:00

  • Punctuated Aneuploidization of the Budding Yeast Genome.

    abstract::Remarkably complex patterns of aneuploidy have been observed in the genomes of many eukaryotic cell types, ranging from brewing yeasts to tumor cells. Such aberrant karyotypes are generally thought to take shape progressively over many generations, but evidence also suggests that genomes may undergo faster modes of ev...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.120.303536

    authors: Heasley LR,Watson RA,Argueso JL

    更新日期:2020-09-01 00:00:00

  • A novel nonnull ZIP1 allele triggers meiotic arrest with synapsed chromosomes in Saccharomyces cerevisiae.

    abstract::During meiotic prophase, assembly of the synaptonemal complex (SC) brings homologous chromosomes into close apposition along their lengths. The Zip1 protein is a major building block of the SC in Saccharomyces cerevisiae. In the absence of Zip1, SC fails to form, cells arrest or delay in meiotic prophase (depending on...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:10.1534/genetics.107.071100

    authors: Mitra N,Roeder GS

    更新日期:2007-06-01 00:00:00

  • Null mutations in the lin-31 gene indicate two functions during Caenorhabditis elegans vulval development.

    abstract::The lin-31 gene is required for the proper specification of vulval cell fates in the nematode Caenorhabditis elegans and encodes a member of the winged-helix family of transcription factors. Members of this important family have been identified in many organisms and are known to bind specific DNA targets involved in a...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Miller LM,Hess HA,Doroquez DB,Andrews NM

    更新日期:2000-12-01 00:00:00

  • Heritability of nestling growth in cross-fostered European Starlings Sturnus vulgaris.

    abstract::In altricial birds, growth rates and nestling morphology vary between broods. For natural selection to produce evolutionary change in these variables, ther must exist heritable variation. Since nestling traits are not any longer presents in parents, traditional offspring-parent regressions cannot estimate heritabiliti...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Smith HG,Wettermark KJ

    更新日期:1995-10-01 00:00:00

  • Apparent selection of enzyme alleles in laboratory populations of Drosophila.

    abstract::Twelve laboratory populations of recently collected Drosophila willistoni were begun with different frequencies of alleles at three enzyme loci, six populations at 25 degrees and six at 19 degrees . Periodic sampling of the populations allowed monitoring of the frequency changes in allozymes over time.-At Lap-5 (a loc...

    journal_title:Genetics

    pub_type: 杂志文章

    doi:

    authors: Powell JR

    更新日期:1973-11-01 00:00:00