αβ T cell receptor germline CDR regions moderate contact with MHC ligands and regulate peptide cross-reactivity.

Abstract:

:αβ T cells respond to peptide epitopes presented by major histocompatibility complex (MHC) molecules. The role of T cell receptor (TCR) germline complementarity determining regions (CDR1 and 2) in MHC restriction is not well understood. Here, we examine T cell development, MHC restriction and antigen recognition where germline CDR loop structure has been modified by multiple glycine/alanine substitutions. Surprisingly, loss of germline structure increases TCR engagement with MHC ligands leading to excessive loss of immature thymocytes. MHC restriction is, however, strictly maintained. The peripheral T cell repertoire is affected similarly, exhibiting elevated cross-reactivity to foreign peptides. Our findings are consistent with germline TCR structure optimising T cell cross-reactivity and immunity by moderating engagement with MHC ligands. This strategy may operate alongside co-receptor imposed MHC restriction, freeing germline TCR structure to adopt this novel role in the TCR-MHC interface.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Attaf M,Holland SJ,Bartok I,Dyson J

doi

10.1038/srep35006

subject

Has Abstract

pub_date

2016-10-24 00:00:00

pages

35006

issn

2045-2322

pii

srep35006

journal_volume

6

pub_type

杂志文章
  • Variation in Raw Milk Microbiota Throughout 12 Months and the Impact of Weather Conditions.

    abstract::Milk microbiota has a great influence on the safety and quality of dairy products. However, few studies have investigated the variations of bacterial composition in raw milk. In this study, raw milk samples were collected in 12 successive months, and their bacterial compositions were determined by 16 S rRNA gene seque...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-20862-8

    authors: Li N,Wang Y,You C,Ren J,Chen W,Zheng H,Liu Z

    更新日期:2018-02-05 00:00:00

  • Necessity of p53-binding to the CDH1 locus for its expression defines two epithelial cell types differing in their integrity.

    abstract::TP53 mutation (i.e., loss of normal-p53) may evoke epithelial-mesenchymal transition (EMT), which was previously attributed to loss of certain miRNAs. However, not all epithelial cells undergo EMT upon TP53 mutation, and the p53-miRNA axis may not fully explain p53 function in epithelial integrity. We here show two mo...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-20043-7

    authors: Oikawa T,Otsuka Y,Onodera Y,Horikawa M,Handa H,Hashimoto S,Suzuki Y,Sabe H

    更新日期:2018-01-25 00:00:00

  • Evaluation of Reference Genes for RT-qPCR Studies in the Seagrass Zostera muelleri Exposed to Light Limitation.

    abstract::Seagrass meadows are threatened by coastal development and global change. In the face of these pressures, molecular techniques such as reverse transcription quantitative real-time PCR (RT-qPCR) have great potential to improve management of these ecosystems by allowing early detection of chronic stress. In RT-qPCR, the...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep17051

    authors: Schliep M,Pernice M,Sinutok S,Bryant CV,York PH,Rasheed MA,Ralph PJ

    更新日期:2015-11-23 00:00:00

  • Fine-tuning of lysine side chain modulates the activity of histone lysine methyltransferases.

    abstract::Histone lysine methyltransferases (KMTs) play an important role in epigenetic gene regulation and have emerged as promising targets for drug discovery. However, the scope and limitation of KMT catalysis on substrates possessing substituted lysine side chains remain insufficiently explored. Here, we identify new unnatu...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-78331-0

    authors: Al Temimi AHK,Merx J,van Noortwijk CJ,Proietti G,Buijs R,White PB,Rutjes FPJT,Boltje TJ,Mecinović J

    更新日期:2020-12-09 00:00:00

  • Transferrin-targeted porous silicon nanoparticles reduce glioblastoma cell migration across tight extracellular space.

    abstract::Mortality of glioblastoma multiforme (GBM) has not improved over the last two decades despite medical breakthroughs in the treatment of other types of cancers. Nanoparticles hold tremendous promise to overcome the pharmacokinetic challenges and off-target adverse effects. However, an inhibitory effect of nanoparticles...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-59146-5

    authors: Sheykhzadeh S,Luo M,Peng B,White J,Abdalla Y,Tang T,Mäkilä E,Voelcker NH,Tong WY

    更新日期:2020-02-11 00:00:00

  • Photobiomodulation of human dermal fibroblasts in vitro: decisive role of cell culture conditions and treatment protocols on experimental outcome.

    abstract::Photobiomodulation-based (LLLT) therapies show tantalizing promise for treatment of skin diseases. Confidence in this approach is blighted however by lamentable inconsistency in published experimental designs, and so complicates interpretation. Here we interrogate the appropriateness of a range of previously-reported ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-02802-0

    authors: Mignon C,Uzunbajakava NE,Raafs B,Botchkareva NV,Tobin DJ

    更新日期:2017-06-05 00:00:00

  • Phaeophleospora vochysiae Savi & Glienke sp. nov. Isolated from Vochysia divergens Found in the Pantanal, Brazil, Produces Bioactive Secondary Metabolites.

    abstract::Microorganisms associated with plants are highly diverse and can produce a large number of secondary metabolites, with antimicrobial, anti-parasitic and cytotoxic activities. We are particularly interested in exploring endophytes from medicinal plants found in the Pantanal, a unique and widely unexplored wetland in Br...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-21400-2

    authors: Savi DC,Shaaban KA,Gos FMWR,Ponomareva LV,Thorson JS,Glienke C,Rohr J

    更新日期:2018-02-15 00:00:00

  • Urotensin II-induced store-operated Ca2+ entry contributes to glomerular mesangial cell proliferation and extracellular matrix protein production under high glucose conditions.

    abstract::Glomerular mesangial cell (GMC) proliferation and matrix expansion are pathological hallmarks of a wide range of kidney diseases, including diabetic nephropathy. Although the circulating level of peptide hormone urotensin II (UII) and kidney tissue expression of UII and UII receptors (UTR) are increased in diabetic ne...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-18143-x

    authors: Soni H,Adebiyi A

    更新日期:2017-12-22 00:00:00

  • Zika Virus Associated Pathology and Antigen Presence in the Testicle in the Absence of Sexual Transmission During Subacute to Chronic Infection in a Mouse Model.

    abstract::Zika virus (ZIKV) is an arboviral infection that has been shown to be sexually transmitted. The study outlined herein aims to determine if accessory sex glands and epididymal epithelial cells are sources of viral persistence in subacute and chronic ZIKV infection, and if infection of these organs is important in sexua...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-44582-9

    authors: Clancy CS,Van Wettere AJ,Morrey JD,Julander JG

    更新日期:2019-06-06 00:00:00

  • Transcriptional profiling identifies differential expression of long non-coding RNAs in Jo-1 associated and inclusion body myositis.

    abstract::Myositis is characterised by muscle inflammation and weakness. Although generally thought to be driven by a systemic autoimmune response, increasing evidence suggests that intrinsic changes in the muscle might also contribute to the pathogenesis. Long non-coding RNAs (lncRNAs) are a family of novel genes that regulate...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-08603-9

    authors: Hamann PD,Roux BT,Heward JA,Love S,McHugh NJ,Jones SW,Lindsay MA

    更新日期:2017-08-14 00:00:00

  • Opposite Carcinogenic Effects of Circadian Clock Gene BMAL1.

    abstract::The circadian clock confers daily rhythmicity on many biochemical and physiological functions and its disruption is associated with increased risks of developing obesity, diabetes, heart disease and cancer. Although, there are studies on the role of Bmal1 in carcinogenesis using germline, conditional or tissue-specifi...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-34433-4

    authors: Korkmaz T,Aygenli F,Emisoglu H,Ozcelik G,Canturk A,Yilmaz S,Ozturk N

    更新日期:2018-10-30 00:00:00

  • Site-to-site interdomain communication may mediate different loss-of-function mechanisms in a cancer-associated NQO1 polymorphism.

    abstract::Disease associated genetic variations often cause intracellular enzyme inactivation, dysregulation and instability. However, allosteric communication of mutational effects to distant functional sites leading to loss-of-function remains poorly understood. We characterize here interdomain site-to-site communication by w...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep44532

    authors: Medina-Carmona E,Neira JL,Salido E,Fuchs JE,Palomino-Morales R,Timson DJ,Pey AL

    更新日期:2017-03-14 00:00:00

  • Insecticide-induced leg loss does not eliminate biting and reproduction in Anopheles gambiae mosquitoes.

    abstract::Recent successes in malaria control have been largely attributable to the deployment of insecticide-based vector control tools such as bed nets and indoor residual spraying. Pyrethroid-treated bed nets are acutely neurotoxic to mosquitoes, inducing symptoms such as loss of coordination, paralysis, and violent spasms. ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep46674

    authors: Isaacs AT,Lynd A,Donnelly MJ

    更新日期:2017-04-25 00:00:00

  • Uncommon mutational profiles of metastatic colorectal cancer detected during routine genotyping using next generation sequencing.

    abstract::RAS genotyping is mandatory to predict anti-EGFR monoclonal antibodies (mAbs) therapy resistance and BRAF genotyping is a relevant prognosis marker in patients with metastatic colorectal cancer. Although the role of hotspot mutations is well defined, the impact of uncommon mutations is still unknown. In this study, we...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-43646-0

    authors: Franczak C,Kandathil SM,Gilson P,Husson M,Rouyer M,Demange J,Leroux A,Merlin JL,Harlé A

    更新日期:2019-05-08 00:00:00

  • Lack of NLRP3-inflammasome leads to gut-liver axis derangement, gut dysbiosis and a worsened phenotype in a mouse model of NAFLD.

    abstract::Non-Alcoholic Fatty Liver Disease (NAFLD) represents the most common form of chronic liver injury and can progress to cirrhosis and hepatocellular carcinoma. A "multi-hit" theory, involving high fat diet and signals from the gut-liver axis, has been hypothesized. The role of the NLRP3-inflammasome, which senses danger...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-11744-6

    authors: Pierantonelli I,Rychlicki C,Agostinelli L,Giordano DM,Gaggini M,Fraumene C,Saponaro C,Manghina V,Sartini L,Mingarelli E,Pinto C,Buzzigoli E,Trozzi L,Giordano A,Marzioni M,Minicis S,Uzzau S,Cinti S,Gastaldelli A,Sveg

    更新日期:2017-09-22 00:00:00

  • Plasmodium spp. mixed infection leading to severe malaria: a systematic review and meta-analysis.

    abstract::Mixed Plasmodium malaria infections can lead to severe malaria. This systematic review and meta-analysis aimed to explore the prevalence of severe mixed Plasmodium malaria infection and to compare it with the prevalence of severe P. falciparum malaria mono-infection across the included studies. Original English-langua...

    journal_title:Scientific reports

    pub_type: 杂志文章,meta分析

    doi:10.1038/s41598-020-68082-3

    authors: Kotepui M,Kotepui KU,De Jesus Milanez G,Masangkay FR

    更新日期:2020-07-06 00:00:00

  • Effects of inhaled nitric oxide on outcome after prolonged cardiac arrest in mild therapeutic hypothermia treated rats.

    abstract::Guidelines endorse targeted temperature management to reduce neurological sequelae and mortality after cardiac arrest (CA). Additional therapeutic approaches are lacking. Inhaled nitric oxide (iNO) given post systemic ischemia/reperfusion injury improves outcomes. Attenuated inflammation by iNO might be crucial in bra...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-25213-1

    authors: Brücken A,Bleilevens C,Berger P,Nolte K,Gaisa NT,Rossaint R,Marx G,Derwall M,Fries M

    更新日期:2018-04-30 00:00:00

  • Characterisation of the Cyanate Inhibited State of Cytochrome c Oxidase.

    abstract::Heme-copper oxygen reductases are terminal respiratory enzymes, catalyzing the reduction of dioxygen to water and the translocation of protons across the membrane. Oxygen consumption is inhibited by various substances. Here we tested the relatively unknown inhibition of cytochrome c oxidase (CcO) with isocyanate. In c...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-60801-0

    authors: Kruse F,Nguyen AD,Dragelj J,Schlesinger R,Heberle J,Mroginski MA,Weidinger IM

    更新日期:2020-03-02 00:00:00

  • Adherence to the Mediterranean diet is associated with a higher BMD in middle-aged and elderly Chinese.

    abstract::Previous studies showed that better adherence to the Mediterranean diet (MD) is associated with lower risk of chronic diseases, but limited data are available on bone health. We investigated the association of the MD with bone mineral density (BMD) in Chinese adults. We included 2371 participants aged 40-75 years in t...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep25662

    authors: Chen GD,Dong XW,Zhu YY,Tian HY,He J,Chen YM

    更新日期:2016-05-09 00:00:00

  • Single-cell, single-mRNA analysis of Ccnb1 promoter regulation.

    abstract::Promoter activation drives gene transcriptional output. Here we report generating site-specifically integrated single-copy promoter transgenes and measuring their expression to indicate promoter activities at single-mRNA level. mRNA counts, Pol II density and Pol II firing rates of the Ccnb1 promoter transgene resembl...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-02240-y

    authors: Vishnoi N,Yao J

    更新日期:2017-05-18 00:00:00

  • Manipulation of cell migration by laserporation-induced local wounding.

    abstract::Living organisms employ various mechanisms to escape harm. At the cellular level, mobile cells employ movement to avoid harmful chemicals or repellents. The present study is the first to report that cells move away from the site of injury in response to local wounding. When a migrating Dictyostelium cell was locally w...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-39678-1

    authors: Pervin MS,Yumura S

    更新日期:2019-03-12 00:00:00

  • Transcriptome analyses suggest a novel hypothesis for whitefly adaptation to tobacco.

    abstract::The adaptation of herbivorous insects to various host plants facilitates the spread and outbreak of many important invasive pests, however, the molecular mechanisms that underneath this process are poorly understood. In the past three decades, two species of the whitefly Bemisia tabaci complex, Middle East-Asia Minor ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-12387-3

    authors: Xia WQ,Wang XR,Liang Y,Liu SS,Wang XW

    更新日期:2017-09-21 00:00:00

  • Fall predictors beyond fall risk assessment tool items for acute hospitalized older adults: a matched case-control study.

    abstract::We investigated whether clinical factors including comorbidities, medications, and laboratory results predict inpatient fall risk in older adults. The participants in this case-control study included hospitalized older adults with acute conditions who had falls during their hospital stay (case group) and 410 hospitali...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-021-81034-9

    authors: Noh HM,Song HJ,Park YS,Han J,Roh YK

    更新日期:2021-01-15 00:00:00

  • Triplex real-time PCR--an improved method to detect a wide spectrum of mitochondrial DNA deletions in single cells.

    abstract::Mitochondrial DNA (mtDNA) mutations are commonly found in the skeletal muscle of patients with mitochondrial disease, inflammatory myopathies and sarcopenia. The majority of these mutations are mtDNA deletions, which accumulate to high levels in individual muscle fibres causing a respiratory defect. Most mtDNA deletio...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep09906

    authors: Rygiel KA,Grady JP,Taylor RW,Tuppen HA,Turnbull DM

    更新日期:2015-05-19 00:00:00

  • Contribution of Streptococcus mutans to Helicobacter pylori colonisation in oral cavity and gastric tissue.

    abstract::Helicobacter pylori is presumed to infect gastric tissue via the oral cavity in childhood, whereas risk factors for H. pylori infection in the oral cavity are unknown. In this study, we analysed the effects of Streptococcus mutans, a major cariogenic bacterial species, on H. pylori colonisation in the oral cavity, as ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-69368-2

    authors: Nomura R,Kadota T,Ogaya Y,Matayoshi S,Iwashita N,Okawa R,Nakano K

    更新日期:2020-07-27 00:00:00

  • Background free imaging of single mRNAs in live cells using split fluorescent proteins.

    abstract::We describe a technique for imaging single mRNAs in living cells based on fluorescent protein (FP) complementation. We employ the high affinity interaction between the bacterial phage MS2/PP7 coat proteins and their respective RNA binding motifs as an RNA scaffold to bring two halves of a split-FP together to image si...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep03615

    authors: Wu B,Chen J,Singer RH

    更新日期:2014-01-09 00:00:00

  • Ultrafast synaptic events in a chalcogenide memristor.

    abstract::Compact and power-efficient plastic electronic synapses are of fundamental importance to overcoming the bottlenecks of developing a neuromorphic chip. Memristor is a strong contender among the various electronic synapses in existence today. However, the speeds of synaptic events are relatively slow in most attempts at...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep01619

    authors: Li Y,Zhong Y,Xu L,Zhang J,Xu X,Sun H,Miao X

    更新日期:2013-01-01 00:00:00

  • Quasisolitons in self-diffusive excitable systems, or Why asymmetric diffusivity obeys the Second Law.

    abstract::Solitons, defined as nonlinear waves which can reflect from boundaries or transmit through each other, are found in conservative, fully integrable systems. Similar phenomena, dubbed quasi-solitons, have been observed also in dissipative, "excitable" systems, either at finely tuned parameters (near a bifurcation) or in...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep30879

    authors: Biktashev VN,Tsyganov MA

    更新日期:2016-08-05 00:00:00

  • Efficacy and safety of the fixed combinations of tafluprost/timolol and latanoprost/carteolol.

    abstract::In this study, we made a comparative efficacy and safety assessment of two different fixed combinations of drugs, viz., tafluprost/timolol (TAF/TIM) and latanoprost/carteolol (LAT/CAR), by determining their effects on intraocular pressure (IOP) in ocular normotensive monkeys and examining their toxic effects on ocular...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-44028-2

    authors: Fuwa M,Shimazaki A,Mieda M,Yamashita N,Akaishi T,Taniguchi T,Kato M

    更新日期:2019-05-16 00:00:00

  • Designing contrasts for rapid, simultaneous parameter quantification and flow visualization with quantitative transient-state imaging.

    abstract::Magnetic resonance imaging (MRI) has evolved into an outstandingly versatile diagnostic modality, as it has the ability to non-invasively produce detailed information on a tissue's structure and function. Complementary data is normally obtained in separate measurements, either as contrast-weighted images, which are fa...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-44832-w

    authors: Gómez PA,Molina-Romero M,Buonincontri G,Menzel MI,Menze BH

    更新日期:2019-06-11 00:00:00