Two nifA-like genes required for expression of alternative nitrogenases by Azotobacter vinelandii.

Abstract:

:Two nifA-like genes, designated anfA and vnfA, have been identified in Azotobacter vinelandii. The anfA gene is located upstream from the nitrogenase-3 structural gene cluster (anfHDGK) and is preceded by a sequence that is potentially part of a ntrA-dependent promoter. The product of anfA appears to be required for expression of nitrogenase-3, since cells of the anfA deletion strain CA66 were unable to synthesize this nitrogenase when derepressed in N-free, Mo- and V-deficient medium. The vnfA gene was identified after determination of the nucleotide sequence of DNA flanking the Tn5 insertion in mutant strain CA46. Two open reading frames (ORF1 and ORF2) were found located upstream from the vnfA gene, and a nifE-like ORF, preceded by a possible ntrA-dependent promoter, was found downstream from this gene. It is not known whether vnfA is expressed only under N2-fixing conditions. However, potential ntrA-dependent promoters were found immediately upstream from vnfA (within the 3' end of ORF2) and immediately downstream from ORF1. The region spanning ORF1 and ORF2 contained an A + T-rich sequence that was also found immediately upstream from the potential ntrA-dependent promoter of anfA. The product of vnfA appears to be required for the synthesis of nitrogenase-2, since cells of strain CA46 synthesized only nitrogenase-1 and -3 but not nitrogenase-2 when grown in the presence of vanadium. The product of nifA, which is required for synthesis of nitrogenase-1, is not required for synthesis of either nitrogenase-2 or nitrogenase-3. However, growth data indicate that nifA is required for a factor (or factors) necessary for maximal diazotrophic growth under Mo- and V-deficient conditions.

journal_name

J Bacteriol

journal_title

Journal of bacteriology

authors

Joerger RD,Jacobson MR,Bishop PE

doi

10.1128/jb.171.6.3258-3267.1989

subject

Has Abstract

pub_date

1989-06-01 00:00:00

pages

3258-67

issue

6

eissn

0021-9193

issn

1098-5530

journal_volume

171

pub_type

杂志文章
  • Analysis of the regulation of gene expression during Bacillus subtilis sporulation by manipulation of the copy number of spo-lacZ fusions.

    abstract::The control of expression of the Bacillus subtilis spoIIA locus was analyzed by titrating gene expression against gene copy number. A plasmid integrated into the B. subtilis chromosome and carrying the spoIIA control region fused to Escherichia coli lacZ was forced to form tandem repeats by the selection of clones tha...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.169.3.1260-1266.1987

    authors: Piggot PJ,Curtis CA

    更新日期:1987-03-01 00:00:00

  • Survey of extrachromosomal DNA found in the filamentous cyanobacteria.

    abstract::Cleared lysates of 13 species of filamentous cyanobacteria were examined for the presence of extrachromosomal DNA by using agarose gel electrophoresis and ethidium bromide staining. Seven of the 13 species contained extrachromosomal covalently closed circular DNA, and all but 1 species contained multiple elements. The...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.136.1.414-418.1978

    authors: Simon RD

    更新日期:1978-10-01 00:00:00

  • A truncated form of the Pho80 cyclin of Saccharomyces cerevisiae induces expression of a small cytosolic factor which inhibits vacuole inheritance.

    abstract::Vacuoles project streams of vesicles and membranous tubules into the yeast bud where they fuse, founding the daughter cell organelle, vac5-1, which encodes a truncated form of the Pho80 cyclin, inhibits normal vacuole inheritance. An in vitro inheritance assay which measures the fusion of vacuoles serves as a model fo...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.178.14.4047-4051.1996

    authors: Nicolson T,Conradt B,Wickner W

    更新日期:1996-07-01 00:00:00

  • Penicillin-binding proteins of bdellovibrios.

    abstract::We examined the predacious gram-negative bacterium Bdellovibrio bacteriovorous 109J and free-living strains 109J-A1 and 109J-KA1 derived therefrom for penicillin-binding proteins (PBPs). We compared their PBPs with those of the host bacterium, Escherichia coli, and with those of a facultatively predacious bdellovibrio...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.170.8.3750-3751.1988

    authors: Park JT,Mahadevan S

    更新日期:1988-08-01 00:00:00

  • Loss of the penicillinase plasmid after treatment of Staphylococcus aureus with sodium dodecyl sulfate.

    abstract::Two strains of Staphylococcus aureus (PC1 and 196E), when grown in medium containing 0.002% sodium dodecyl sulfate (SDS), showed from 96.1 to 100% loss of the ability to produce penicillinase. Resistance to cadmium and zinc was lost concomitantly with the ability to produce penicillinase. A comparison of the rate of c...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.109.1.262-265.1972

    authors: Sonstein SA,Baldwin JN

    更新日期:1972-01-01 00:00:00

  • Multiple genes for membrane-bound phosphatases in Escherichia coli and their action on phospholipid precursors.

    abstract::We have devised a coupled radiochemical assay for detecting phosphatidylglycerolphosphate (PGP) phosphatase activity in Escherichia coli colonies immobilized on filter paper. There appeared to be at least two enzymes capable of dephosphorylating PGP, as judged by the characterization of mutations in two genes designat...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.153.2.722-730.1983

    authors: Icho T,Raetz CR

    更新日期:1983-02-01 00:00:00

  • Isolation and characterization of amber mutations in the lexA gene of Escherichia coli K-12.

    abstract::We describe the isolation and characterization of amber mutations in the lexA gene of Escherichia coli K-12. These mutations, designated spr(Am), were isolated and characterized in a lexA tif sfi genetic background. They abolished the sensitivity of the strain to UV light and resulted in high rates of synthesis of rec...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.137.1.568-573.1979

    authors: Pacelli LZ,Edmiston SH,Mount DW

    更新日期:1979-01-01 00:00:00

  • A global investigation of the Bacillus subtilis iron-sparing response identifies major changes in metabolism.

    abstract::The Bacillus subtilis ferric uptake regulator (Fur) protein is the major sensor of cellular iron status. When iron is limiting for growth, derepression of the Fur regulon increases the cellular capacity for iron uptake and mobilizes an iron-sparing response mediated in large part by a small noncoding RNA named FsrA. F...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.05990-11

    authors: Smaldone GT,Revelles O,Gaballa A,Sauer U,Antelmann H,Helmann JD

    更新日期:2012-05-01 00:00:00

  • Effect of alanine, leucine and fructose on lysyl-transfer ribonucleic acid ligase activity in a mutant of Escherichia coli K-12.

    abstract::A mutant of Escherichia coli K-12 was examined which has growth medium-dependent lysyl-transfer ribonucleic acid (tRNA) ligase activity. In minimal medium or 0.5% yeast extract, the activity of the enzyme in the mutant strain was 5 to 10% of wild type. However, when the mutant was grown in a highly enriched medium, su...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.113.1.167-177.1973

    authors: Hirshfield IN,Bukald NE

    更新日期:1973-01-01 00:00:00

  • Structure-specific nuclease activities of Pyrococcus abyssi RNase HII.

    abstract::Faithful DNA replication involves the removal of RNA residues from genomic DNA prior to the ligation of nascent DNA fragments in all living organisms. Because the physiological roles of archaeal type 2 RNase H are not fully understood, the substrate structure requirements for the detection of RNase H activity need fur...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.00268-10

    authors: Le Laz S,Le Goaziou A,Henneke G

    更新日期:2010-07-01 00:00:00

  • Specificity in deoxyribonucleic acid uptake by transformable Haemophilus influenzae.

    abstract::Cells of Haemophilus influenzae strain Rd competent for genetic transformation irreversibly bound approximately five molecular fragments of H. influenzae deoxyribonucleic acid (DNA) per cell; under identical conditions, DNA derived from Escherichia coli B was not taken up (<1 molecule per 50 cells). Similarly, DNA fro...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.118.2.369-373.1974

    authors: Scocca JJ,Poland RL,Zoon KC

    更新日期:1974-05-01 00:00:00

  • Cyanobacterial transposons Tn5469 and Tn5541 represent a novel noncomposite transposon family.

    abstract::A noncomposite transposon, designated Tn5541, was isolated from strain Fd33 of the filamentous cyanobacterium Fremyella diplosiphon UTEX 481. Sequence analysis showed that Tn5541 is structurally and genetically very similar to Tn5469, which is also endogenous to F. diplosiphon. Both Tn5469 and Tn5541 encode homologous...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.180.22.6059-6063.1998

    authors: Schaefer MR,Kahn K

    更新日期:1998-11-01 00:00:00

  • Cloning and expression of afpA, a gene encoding an antifreeze protein from the arctic plant growth-promoting rhizobacterium Pseudomonas putida GR12-2.

    abstract::The Arctic plant growth-promoting rhizobacterium Pseudomonas putida GR12-2 secretes an antifreeze protein (AFP) that promotes survival at subzero temperatures. The AFP is unusual in that it also exhibits a low level of ice nucleation activity. A DNA fragment with an open reading frame encoding 473 amino acids was clon...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.186.17.5661-5671.2004

    authors: Muryoi N,Sato M,Kaneko S,Kawahara H,Obata H,Yaish MW,Griffith M,Glick BR

    更新日期:2004-09-01 00:00:00

  • Exfoliatin-producing strains define a fourth agr specificity group in Staphylococcus aureus.

    abstract::The staphylococcal virulon is activated by the density-sensing agr system, which is autoinduced by a short peptide (autoinducing peptide [AIP]) processed from a propeptide encoded by agrD. A central segment of the agr locus, consisting of the C-terminal two-thirds of AgrB (the putative processing enzyme), AgrD, and th...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.182.22.6517-6522.2000

    authors: Jarraud S,Lyon GJ,Figueiredo AM,Lina G,Vandenesch F,Etienne J,Muir TW,Novick RP

    更新日期:2000-11-01 00:00:00

  • Purification and cloning of a thermostable xylose (glucose) isomerase with an acidic pH optimum from Thermoanaerobacterium strain JW/SL-YS 489.

    abstract::An unusual xylose isomerase produced by Thermoanaerobacterium strain JW/SL-YS 489 was purified 28-fold to gel electrophoretic homogeneity, and the biochemical properties were determined. Its pH optimum distinguishes this enzyme from all other previously described xylose isomerases. The purified enzyme had maximal acti...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.178.20.5938-5945.1996

    authors: Liu SY,Wiegel J,Gherardini FC

    更新日期:1996-10-01 00:00:00

  • Procedure for isolating mutants defective in metabolite transport or utilization.

    abstract::Mutants defective in uptake or utilization of a given metabolite can readily be obtained from facultative auxotrophs (for that metabolite) by penicillin enrichment under nonpermissive conditions in the presence of a low level of the required metabolite. ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.121.3.1216-1218.1975

    authors: Berg CM,Rossi JJ,Coleman JV,Conlon M

    更新日期:1975-03-01 00:00:00

  • Staphylococcus aureus cap5P encodes a UDP-N-acetylglucosamine 2-epimerase with functional redundancy.

    abstract::The serotype 5 capsule gene cluster of Staphylococcus aureus comprises 16 genes (cap5A through cap5P), but little is known about how the putative gene products function in capsule biosynthesis. We propose that the N-acetylmannosaminuronic acid (ManNAcA) component of the S. aureus serotype 5 capsular polysaccharide (CP...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.181.16.4818-4824.1999

    authors: Kiser KB,Bhasin N,Deng L,Lee JC

    更新日期:1999-08-01 00:00:00

  • Relative stability of membrane proteins in Escherichia coli.

    abstract::The relative stability of membrane proteins in Escherichia coli was investigated to determine whether these proteins are degraded at heterogeneous rates and, if so, whether the degradative rates are correlated with the sizes or charges of the proteins. Cells growing in a glucose-limited chemostat with a generation tim...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.146.2.476-483.1981

    authors: Schroer DW,St John AC

    更新日期:1981-05-01 00:00:00

  • Regulation of switching frequency and bias of the bacterial flagellar motor by CheY and fumarate.

    abstract::The effect of CheY and fumarate on switching frequency and rotational bias of the bacterial flagellar motor was analyzed by computer-aided tracking of tethered Escherichia coli. Plots of cells overexpressing CheY in a gutted background showed a bell-shaped correlation curve of Switching frequency and bias centering at...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.180.13.3375-3380.1998

    authors: Montrone M,Eisenbach M,Oesterhelt D,Marwan W

    更新日期:1998-07-01 00:00:00

  • Macromolecule synthesis in yeast spheroplasts.

    abstract::Conditions have been established for the preparation of spheroplasts of Saccharomyces cerevisiae which are able to increase their net content of protein, ribonucleic acid (RNA), and deoxyribonucleic acid (DNA), several-fold upon incubation in a medium stabilized with 1 m sorbitol. The rate of RNA and protein synthesis...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.94.5.1697-1705.1967

    authors: Hutchison HT,Hartwell LH

    更新日期:1967-11-01 00:00:00

  • D-glucaric acid and galactaric acid catabolism by Agrobacterium tumefaciens.

    abstract::Cell-free extract (crude extract) of Agrobacterium tumefaciens grown on d-glucuronate or d-glucarate converts d-glucarate and galactarate to a mixture of 2-keto-3-deoxy- and 4-deoxy-5-keto-d-glucarate. These compounds are then converted by partially purified crude extract to an intermediate tentatively identified as 2...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.102.1.85-96.1970

    authors: Chang YF,Feingold DS

    更新日期:1970-04-01 00:00:00

  • Structure and organization of the pel genes from Erwinia chrysanthemi EC16.

    abstract::The pelA and pelC genes from Erwinia chrysanthemi EC16 were sequenced and overexpressed in Escherichia coli cells. These genes and two others from the same strain that were characterized previously encode catalytically related pectate lyase proteins that are involved with the maceration and soft-rotting of plant tissu...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.170.8.3468-3478.1988

    authors: Tamaki SJ,Gold S,Robeson M,Manulis S,Keen NT

    更新日期:1988-08-01 00:00:00

  • Ultrastructural localization of carbohydrates on thin sections of Staphylococcus aureus with silver methenamine and wheat germ agglutinin-gold complex.

    abstract::Postembedding staining of intracellular carbohydrates on thin sections of Staphylococcus aureus was studied by the silver methenamine and the wheat germ agglutinin-gold techniques. Staining of silver grains was observed on both the cell wall and the cross wall. The staining was interpreted to be due to teichoic acid. ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.169.3.1358-1362.1987

    authors: Morioka H,Tachibana M,Suganuma A

    更新日期:1987-03-01 00:00:00

  • Quorum sensing negatively controls type III secretion regulon expression in Pseudomonas aeruginosa PAO1.

    abstract::A systematic analysis of the type III secretion (T3S) genes of Pseudomonas aeruginosa strain PAO1 revealed that they are under quorum-sensing control. This observation was supported by the down-regulation of the T3S regulon in the presence of RhlR-C4HSL and the corresponding advanced secretion of ExoS in a rhlI mutant...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.187.11.3898-3902.2005

    authors: Bleves S,Soscia C,Nogueira-Orlandi P,Lazdunski A,Filloux A

    更新日期:2005-06-01 00:00:00

  • Ultrastructure of Azotobacter vinelandii.

    abstract::Vegetative cells and cysts of Azotobacter vinelandii 12837 were prepared for electron microscopy by several methods assumed to preserve structural details destroyed by techniques previously reported in the literature. Examination of large numbers of cells and cysts by these methods revealed four structural details not...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.104.2.933-939.1970

    authors: Vela GR,Cagle GD,Holmgren PR

    更新日期:1970-11-01 00:00:00

  • Purification, characterization, and physiological function of Bacillus subtilis ornithine transcarbamylase.

    abstract::A procedure was developed for purification of ornithine transcarbamylase (OTCase) to near homogeneity from Bacillus subtilis 168. The purified native enzyme existed as a mixture of dimeric, tetrameric, and hexameric forms, but was converted to the dimer in the presence of 2-mercaptoethanol. The molecular weight of the...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.155.2.512-521.1983

    authors: Neway JO,Switzer RL

    更新日期:1983-08-01 00:00:00

  • Sorting out bacterial viability with optical tweezers.

    abstract::We have developed a method, using laser, optical tweezers and direct microscopic analysis of reproductive potential and membrane integrity, to assess single-cell viability in a stationary-phase Escherichia coli population. It is demonstrated here that a reduction in cell integrity, determined by using the fluorescent ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.182.19.5551-5555.2000

    authors: Ericsson M,Hanstorp D,Hagberg P,Enger J,Nyström T

    更新日期:2000-10-01 00:00:00

  • Separation and characterization of six (1 leads to 3)-beta-glucanases from Saccharomyces cerevisiae.

    abstract::Using a system of chromatography through columns of DEAE-Bio-Gel, HTP-Bio-Gel, and CM-Bio-Gel, we isolated and characterized six different (1 leads to 3)-beta-glucanases from cell wall autolysates and cell extracts of Saccharomyces cerevisiae haploid strain 2180B. These enzymes were designated glucanases I, II, IIIA, ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.156.3.1204-1213.1983

    authors: Hien NH,Fleet GH

    更新日期:1983-12-01 00:00:00

  • Characterization of late acyltransferase genes of Yersinia pestis and their role in temperature-dependent lipid A variation.

    abstract::Yersinia pestis is an important human pathogen that is maintained in flea-rodent enzootic cycles in many parts of the world. During its life cycle, Y. pestis senses host-specific environmental cues such as temperature and regulates gene expression appropriately to adapt to the insect or mammalian host. For example, Y....

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.188.4.1381-1388.2006

    authors: Rebeil R,Ernst RK,Jarrett CO,Adams KN,Miller SI,Hinnebusch BJ

    更新日期:2006-02-01 00:00:00

  • Evolutionary analysis of Burkholderia pseudomallei identifies putative novel virulence genes, including a microbial regulator of host cell autophagy.

    abstract::Burkholderia pseudomallei, the causative agent of melioidosis, contains a large pathogen genome (7.2 Mb) with ∼2,000 genes of putative or unknown function. Interactions with potential hosts and environmental factors may induce rapid adaptations in these B. pseudomallei genes, which can be discerned through evolutionar...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.00718-13

    authors: Singh AP,Lai SC,Nandi T,Chua HH,Ooi WF,Ong C,Boyce JD,Adler B,Devenish RJ,Tan P

    更新日期:2013-12-01 00:00:00