Is plant evolutionary history impacting recruitment of diazotrophs and nifH expression in the rhizosphere?

Abstract:

:Plant evolutionary history influences the taxonomic composition of the root-associated bacterial community, but whether it can also modulate its functioning is unknown. Here, we tested the hypothesis that crop diversification is a significant factor determining the ecology of the functional group of nitrogen-fixing bacteria the rhizosphere of Poaceae. A greenhouse experiment was carried out using a range of Poaceae, i.e. four Zea mays varieties (from two genetic groups) and teosinte (representing maize's ancestor), sorghum (from the same Panicoideae subfamily), and wheat (from neighboring Pooideae subfamily), as well as the dicot tomato as external reference. Diazotroph rhizosphere community was characterized at 21 days in terms of size (quantitative PCR of nifH genes), composition (T-RFLP and partial sequencing of nifH alleles) and functioning (quantitative RT-PCR, T-RFLP and partial sequencing of nifH transcripts). Plant species and varieties had a significant effect on diazotroph community size and the number of nifH transcripts per root system. Contrarily to expectations, however, there was no relation between Poaceae evolutionary history and the size, diversity or expression of the rhizosphere diazotroph community. These results suggest a constant selection of this functional group through evolution for optimization of nitrogen fixation in the rhizosphere.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Bouffaud ML,Renoud S,Moënne-Loccoz Y,Muller D

doi

10.1038/srep21690

subject

Has Abstract

pub_date

2016-02-23 00:00:00

pages

21690

issn

2045-2322

pii

srep21690

journal_volume

6

pub_type

杂志文章
  • Immunostimulatory functions of adoptively transferred MDSCs in experimental blunt chest trauma.

    abstract::Myeloid-derived suppressor cells (MDSCs) expand during inflammation and exhibit immunomodulatory functions on innate and adaptive immunity. However, their impact on trauma-induced immune responses, characterized by an early pro-inflammatory phase and dysregulated adaptive immunity involving lymphocyte apoptosis, exhau...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-44419-5

    authors: Kustermann M,Klingspor M,Huber-Lang M,Debatin KM,Strauss G

    更新日期:2019-05-29 00:00:00

  • Clinical and Immunological Effects of rhIL-2 Therapy in Eastern Chinese Patients with Multidrug-resistant Tuberculosis.

    abstract::It is urgent to find an optimised therapy regimen for the control of MDR-TB globally. This study aimed to evaluate the efficiacy and safety of a combined regimen of rhIL-2 injection and standard chemotherapy within 18-month duration in a randomized controlled trial conducted in 14 centres in eastern China. From Jan. 2...

    journal_title:Scientific reports

    pub_type: 杂志文章,随机对照试验

    doi:10.1038/s41598-017-18200-5

    authors: Tan Q,Min R,Dai GQ,Wang YL,Nan L,Yang Z,Xia J,Pan SY,Mao H,Xie WP,Wang H

    更新日期:2017-12-19 00:00:00

  • Casimir forces exerted by epsilon-near-zero hyperbolic materials.

    abstract::The Casimir force exerted on a gold dipolar nanoparticle by a finite-thickness slab of the natural hyperbolic material namely, the ortorhombic crystalline modification of boron nitride, is investigated. The main contribution to the force originates from the TM-polarized waves, for frequencies at which the parallel and...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-73995-0

    authors: Nefedov IS,Rubi JM

    更新日期:2020-10-08 00:00:00

  • α-Synuclein impairs ferritinophagy in the retinal pigment epithelium: Implications for retinal iron dyshomeostasis in Parkinson's disease.

    abstract::Retinal degeneration is prominent in Parkinson's disease (PD), a neuromotor disorder associated with aggregation of α-synuclein (α-syn) in the substantia-nigra (SN). Although α-syn is expressed in the neuroretina, absence of prominent aggregates suggests altered function as the likely cause of retinal pathology. We de...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-12862-x

    authors: Baksi S,Singh N

    更新日期:2017-10-09 00:00:00

  • Hydrogen sulfide acts as a double-edged sword in human hepatocellular carcinoma cells through EGFR/ERK/MMP-2 and PTEN/AKT signaling pathways.

    abstract::Hydrogen sulfide (H2S) is involved in cancer biological processes. However, there are several controversies concerning the role of H2S in cancer development and progression. In this study, we found that the growth and migration of hepatocellular carcinoma (HCC) cells were enhanced by 10-100 μM NaHS and dose-dependentl...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-05457-z

    authors: Wu D,Li M,Tian W,Wang S,Cui L,Li H,Wang H,Ji A,Li Y

    更新日期:2017-07-11 00:00:00

  • Enzyme and lateral flow monoclonal antibody-based immunoassays to simultaneously determine spirotetramat and spirotetramat-enol in foodstuffs.

    abstract::Spirotetramat is employed worldwide to fight insect pests due to its high efficiency. This chemical is quickly metabolized by plants into spirotetramat-enol, so current regulations establish that both compounds must be determined in foodstuffs for monitoring purposes. Nowadays, immunochemical methods constitute rapid ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-021-81432-z

    authors: Cevallos-Cedeño RE,Agulló C,Abad-Fuentes A,Abad-Somovilla A,Mercader JV

    更新日期:2021-01-19 00:00:00

  • Costunolide and dehydrocostuslactone combination treatment inhibit breast cancer by inducing cell cycle arrest and apoptosis through c-Myc/p53 and AKT/14-3-3 pathway.

    abstract::Our previous studies demonstrated that volatile oil from saussurea lappa root (VOSL), rich in two natural sesquiterpene lactones, costunolide (Cos) and dehydrocostuslactone (Dehy), exerts better anti-breast cancer efficacy and lower side effects than Cos or Dehy alone in vivo, however, their anti-cancer molecular mech...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep41254

    authors: Peng Z,Wang Y,Fan J,Lin X,Liu C,Xu Y,Ji W,Yan C,Su C

    更新日期:2017-01-24 00:00:00

  • Ectopic expression of Triticum aestivum SERK genes (TaSERKs) control plant growth and development in Arabidopsis.

    abstract::Somatic embryogenesis receptor kinases (SERKs) belong to a small gene family of receptor-like kinases involved in signal transduction. A total of 54 genes were shortlisted from the wheat genome survey sequence of which 5 were classified as SERKs and 49 were identified as SERK-like (SERLs). Tissue- specific expression ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-10038-1

    authors: Singh A,Khurana P

    更新日期:2017-09-28 00:00:00

  • Author Correction: Comparing Sanger sequencing and high-throughput metabarcoding for inferring photobiont diversity in lichens.

    abstract::A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has been fixed in the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-018-35358-8

    authors: Paul F,Otte J,Schmitt I,Grande FD

    更新日期:2018-11-16 00:00:00

  • Loss of Parkinson's susceptibility gene LRRK2 promotes carcinogen-induced lung tumorigenesis.

    abstract::Pathological links between neurodegenerative disease and cancer are emerging. LRRK2 overactivity contributes to Parkinson's disease, whereas our previous analyses of public cancer patient data revealed that decreased LRRK2 expression is associated with lung adenocarcinoma (LUAD). The clinical and functional relevance ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-021-81639-0

    authors: Lebovitz C,Wretham N,Osooly M,Milne K,Dash T,Thornton S,Tessier-Cloutier B,Sathiyaseelan P,Bortnik S,Go NE,Halvorsen E,Cederberg RA,Chow N,Dos Santos N,Bennewith KL,Nelson BH,Bally MB,Lam WL,Gorski SM

    更新日期:2021-01-22 00:00:00

  • Tandem Mass Tag (TMT)-based quantitative proteomics reveals potential targets associated with onset of Sub-clinical Mastitis in cows.

    abstract::Bovine milk is vital for infant nutrition and is a major component of the human diet. Bovine mastitis is a common inflammatory disease of mammary gland in cattle. It alters the immune profile of the animal and lowers the quality and yield of milk causing huge economic losses to dairy industry. The incidence of sub-cli...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-66211-6

    authors: Bathla S,Sindhu A,Kumar S,Dubey SK,Pattnaik S,Rawat P,Chopra A,Dang A,Kaushik JK,Mohanty AK

    更新日期:2020-06-09 00:00:00

  • Adaptive Intuitionistic Fuzzy Enhancement of Brain Tumor MR Images.

    abstract::Image enhancement techniques are able to improve the contrast and visual quality of magnetic resonance (MR) images. However, conventional methods cannot make up some deficiencies encountered by respective brain tumor MR imaging modes. In this paper, we propose an adaptive intuitionistic fuzzy sets-based scheme, called...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep35760

    authors: Deng H,Deng W,Sun X,Ye C,Zhou X

    更新日期:2016-10-27 00:00:00

  • Towards an ultra-rapid smartphone- connected test for infectious diseases.

    abstract::The development is reported of an ultra-rapid, point-of-care diagnostic device which harnesses surface acoustic wave (SAW) biochips, to detect HIV in a finger prick of blood within 10 seconds (sample-in-result-out). The disposable quartz biochip, based on microelectronic components found in every consumer smartphone, ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-11887-6

    authors: Turbé V,Gray ER,Lawson VE,Nastouli E,Brookes JC,Weiss RA,Pillay D,Emery VC,Verrips CT,Yatsuda H,Athey D,McKendry RA

    更新日期:2017-09-20 00:00:00

  • Camera-based optical palpation.

    abstract::Optical elastography is undergoing extensive development as an imaging tool to map mechanical contrast in tissue. Here, we present a new platform for optical elastography by generating sub-millimetre-scale mechanical contrast from a simple digital camera. This cost-effective, compact and easy-to-implement approach ope...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-72603-5

    authors: Sanderson RW,Fang Q,Curatolo A,Adams W,Lakhiani DD,Ismail HM,Foo KY,Dessauvagie BF,Latham B,Yeomans C,Saunders CM,Kennedy BF

    更新日期:2020-09-29 00:00:00

  • Expression ratio of the TGFβ-inducible gene MYO10 is prognostic for overall survival of squamous cell lung cancer patients and predicts chemotherapy response.

    abstract::In lung cancer a deregulation of Transforming Growth Factor-β (TGFβ) signaling has been observed. Yet, the impact of TGFβ in squamous cell carcinoma of the lung (LUSC) remained to be determined. We combined phenotypic and transcriptome-wide studies and showed that the stimulation of the LUSC cell line SK-MES1 with TGF...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-27912-1

    authors: Dvornikov D,Schneider MA,Ohse S,Szczygieł M,Titkova I,Rosenblatt M,Muley T,Warth A,Herth FJ,Dienemann H,Thomas M,Timmer J,Schilling M,Busch H,Boerries M,Meister M,Klingmüller U

    更新日期:2018-06-22 00:00:00

  • Early functional network alterations in asymptomatic elders at risk for Alzheimer's disease.

    abstract::Amyloid-β (Aβ) deposition is known to starts decades before the onset of clinical symptoms of Alzheimer's disease (AD), however, the detailed pathophysiological processes underlying this preclinical period are not well understood. This study aimed to investigate functional network alterations in cognitively intact eld...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-06876-8

    authors: Nakamura A,Cuesta P,Kato T,Arahata Y,Iwata K,Yamagishi M,Kuratsubo I,Kato K,Bundo M,Diers K,Fernández A,Maestú F,Ito K

    更新日期:2017-07-26 00:00:00

  • Honokiol suppresses TNF-α-induced neutrophil adhesion on cerebral endothelial cells by disrupting polyubiquitination and degradation of IκBα.

    abstract::Adhesion molecules expressed on cerebral endothelial cells (ECs) mediate leukocyte recruitment and play a significant role in cerebral inflammation. Increased levels of adhesion molecules on the EC surface induce leukocyte infiltration into inflammatory areas and are thus hallmarkers of inflammation. Honokiol, isolate...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep26554

    authors: Chen PJ,Wang YL,Kuo LM,Lin CF,Chen CY,Tsai YF,Shen JJ,Hwang TL

    更新日期:2016-05-23 00:00:00

  • Ecophysiological consequences of alcoholism on human gut microbiota: implications for ethanol-related pathogenesis of colon cancer.

    abstract::Chronic consumption of excess ethanol increases the risk of colorectal cancer. The pathogenesis of ethanol-related colorectal cancer (ER-CRC) is thought to be partly mediated by gut microbes. Specifically, bacteria in the colon and rectum convert ethanol to acetaldehyde (AcH), which is carcinogenic. However, the effec...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep27923

    authors: Tsuruya A,Kuwahara A,Saito Y,Yamaguchi H,Tsubo T,Suga S,Inai M,Aoki Y,Takahashi S,Tsutsumi E,Suwa Y,Morita H,Kinoshita K,Totsuka Y,Suda W,Oshima K,Hattori M,Mizukami T,Yokoyama A,Shimoyama T,Nakayama T

    更新日期:2016-06-13 00:00:00

  • Seasonal variability of net sea-air CO2 fluxes in a coastal region of the northern Antarctic Peninsula.

    abstract::We show an annual overview of the sea-air CO2 exchanges and primary drivers in the Gerlache Strait, a hotspot for climate change that is ecologically important in the northern Antarctic Peninsula. In autumn and winter, episodic upwelling events increase the remineralized carbon in the sea surface, leading the region t...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-71814-0

    authors: Monteiro T,Kerr R,Machado EDC

    更新日期:2020-09-10 00:00:00

  • Untargeted LC-HRMS-based metabolomics to identify novel biomarkers of metastatic colorectal cancer.

    abstract::Colorectal cancer is one of the main causes of cancer death worldwide, and novel biomarkers are urgently needed for its early diagnosis and treatment. The utilization of metabolomics to identify and quantify metabolites in body fluids may allow the detection of changes in their concentrations that could serve as diagn...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-55952-8

    authors: Martín-Blázquez A,Díaz C,González-Flores E,Franco-Rivas D,Jiménez-Luna C,Melguizo C,Prados J,Genilloud O,Vicente F,Caba O,Pérez Del Palacio J

    更新日期:2019-12-27 00:00:00

  • Increased alpha-synuclein tear fluid levels in patients with Parkinson's disease.

    abstract::The objective of the study was to estimate if altered levels of alpha-synuclein can be detected in tear fluid of patients with Parkinson's disease (PD). Therefore, tear fluid samples of 75 PD patients, 75 control subjects and 31 atypical Parkinsonian patients were collected and analyzed in triplicates using an ultra-s...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-65503-1

    authors: Maass F,Rikker S,Dambeck V,Warth C,Tatenhorst L,Csoti I,Schmitz M,Zerr I,Leha A,Bähr M,Lingor P

    更新日期:2020-05-22 00:00:00

  • One-dimensional electron gas in strained lateral heterostructures of single layer materials.

    abstract::Confinement of the electron gas along one of the spatial directions opens an avenue for studying fundamentals of quantum transport along the side of numerous practical electronic applications, with high-electron-mobility transistors being a prominent example. A heterojunction of two materials with dissimilar electroni...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-03880-w

    authors: Rubel O

    更新日期:2017-06-28 00:00:00

  • An understanding of third-party friendships in a tolerant macaque.

    abstract::Complex societies are shaped by social relationships between multiple individuals. The pressure to track these relationships has driven the evolution of social cognition in primates. Importantly, it can be adaptive to track not only personal relationships, but also those established between third-parties. Primates hav...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-66407-w

    authors: Whitehouse J,Meunier H

    更新日期:2020-06-17 00:00:00

  • First report of the occurrence of Asian citrus psyllid Diaphorina citri (Hemiptera: Liviidae), an invasive species in Nigeria, West Africa.

    abstract::The Asian citrus psyllid (ACP; Diaphorina citri) is the vector of Candidatus Liberibacter asiaticus (CLas) that is associated with the devastating Huanglongbing (HLB; citrus greening disease). This pest of Asian origin has spread into the Americas and more recently into a few countries in East Africa. During recent su...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-66380-4

    authors: Oke AO,Oladigbolu AA,Kunta M,Alabi OJ,Sétamou M

    更新日期:2020-06-10 00:00:00

  • First insight into microbiome profile of fungivorous thrips Hoplothrips carpathicus (Insecta: Thysanoptera) at different developmental stages: molecular evidence of Wolbachia endosymbiosis.

    abstract::Insects' exoskeleton, gut, hemocoel, and cells are colonized by various microorganisms that often play important roles in their host life. Moreover, insects are frequently infected by vertically transmitted symbionts that can manipulate their reproduction. The aims of this study were the characterization of bacterial ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-32747-x

    authors: Kaczmarczyk A,Kucharczyk H,Kucharczyk M,Kapusta P,Sell J,Zielińska S

    更新日期:2018-09-26 00:00:00

  • Ergodicity breaking transition in a glassy soft sphere system at small but non-zero temperatures.

    abstract::While the glass transition at non-zero temperature seems to be hard to access for experimental, theoretical, or simulation studies, jamming at zero temperature has been studied in great detail. Motivated by the exploration of the energy landscape that has been successfully used to investigate athermal jamming, we intr...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-20152-3

    authors: Maiti M,Schmiedeberg M

    更新日期:2018-01-30 00:00:00

  • Indoor spectroradiometric characterization of plastic litters commonly polluting the Mediterranean Sea: toward the application of multispectral imagery.

    abstract::Around 350 million tonnes of plastics are annually produced worldwide. A remarkable percentage of these products is dispersed in the environment, finally reaching and dispersed in the marine environment. Recent field surveys detected microplastics' concentrations in the Mediterranean Sea. The most commonly polymers fo...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-74543-6

    authors: Corbari L,Maltese A,Capodici F,Mangano MC,Sarà G,Ciraolo G

    更新日期:2020-11-16 00:00:00

  • Preparing two-dimensional microporous carbon from Pistachio nutshell with high areal capacitance as supercapacitor materials.

    abstract::Two-dimensional (2D) porous carbon AC-SPN-3 possessing of amazing high micropore volume ratio of 83% and large surface area of about 1069 m(2) g(-1) is high-yield obtained by pyrolysis of natural waste Pistachio nutshells with KOH activation. The AC-SPN-3 has a curved 2D lamellar morphology with the thickness of each ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep05545

    authors: Xu J,Gao Q,Zhang Y,Tan Y,Tian W,Zhu L,Jiang L

    更新日期:2014-07-02 00:00:00

  • Artificial whole genome duplication in paleopolyploid sturgeons yields highest documented chromosome number in vertebrates.

    abstract::Critically endangered sturgeons, having undergone three whole genome duplication events, represent an exceptional example of ploidy plasticity in vertebrates. Three extant ploidy groups, combined with autopolyploidization, interspecific hybridization and the fertility of hybrids are important issues in sturgeon conser...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-76680-4

    authors: Lebeda I,Ráb P,Majtánová Z,Flajšhans M

    更新日期:2020-11-12 00:00:00

  • Forecasting high-dimensional dynamics exploiting suboptimal embeddings.

    abstract::Delay embedding-a method for reconstructing dynamical systems by delay coordinates-is widely used to forecast nonlinear time series as a model-free approach. When multivariate time series are observed, several existing frameworks can be applied to yield a single forecast combining multiple forecasts derived from vario...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-57255-4

    authors: Okuno S,Aihara K,Hirata Y

    更新日期:2020-01-20 00:00:00