Untargeted LC-HRMS-based metabolomics to identify novel biomarkers of metastatic colorectal cancer.

Abstract:

:Colorectal cancer is one of the main causes of cancer death worldwide, and novel biomarkers are urgently needed for its early diagnosis and treatment. The utilization of metabolomics to identify and quantify metabolites in body fluids may allow the detection of changes in their concentrations that could serve as diagnostic markers for colorectal cancer and may also represent new therapeutic targets. Metabolomics generates a pathophysiological 'fingerprint' that is unique to each individual. The purpose of our study was to identify a differential metabolomic signature for metastatic colorectal cancer. Serum samples from 60 healthy controls and 65 patients with metastatic colorectal cancer were studied by liquid chromatography coupled to high-resolution mass spectrometry in an untargeted metabolomic approach. Multivariate analysis revealed a separation between patients with metastatic colorectal cancer and healthy controls, who significantly differed in serum concentrations of one endocannabinoid, two glycerophospholipids, and two sphingolipids. These findings demonstrate that metabolomics using liquid-chromatography coupled to high-resolution mass spectrometry offers a potent diagnostic tool for metastatic colorectal cancer.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Martín-Blázquez A,Díaz C,González-Flores E,Franco-Rivas D,Jiménez-Luna C,Melguizo C,Prados J,Genilloud O,Vicente F,Caba O,Pérez Del Palacio J

doi

10.1038/s41598-019-55952-8

subject

Has Abstract

pub_date

2019-12-27 00:00:00

pages

20198

issue

1

issn

2045-2322

pii

10.1038/s41598-019-55952-8

journal_volume

9

pub_type

杂志文章
  • Author Correction: Statistical optimization of light intensity and CO2 concentration for lipid production derived from attached cultivation of green microalga Ettlia sp.

    abstract::A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has been fixed in the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-019-43507-w

    authors: Kim S,Moon M,Kwak M,Lee B,Chang YK

    更新日期:2019-06-05 00:00:00

  • Mechanical Flip-Chip for Ultra-High Electron Mobility Devices.

    abstract::Electrostatic gates are of paramount importance for the physics of devices based on high-mobility two-dimensional electron gas (2DEG) since they allow depletion of electrons in selected areas. This field-effect gating enables the fabrication of a wide range of devices such as, for example, quantum point contacts (QPC)...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep13494

    authors: Bennaceur K,Schmidt BA,Gaucher S,Laroche D,Lilly MP,Reno JL,West KW,Pfeiffer LN,Gervais G

    更新日期:2015-09-22 00:00:00

  • 1,25 (OH)2D3 treatment alters the granulomatous response in M. tuberculosis infected mice.

    abstract::Induction of cathelicidin-mediated antimicrobial pathway against intracellular M. tuberculosis by 1,25-dihydroxyvitamin D3 (1,25(OH)2D3), the active form of vitamin D, has been documented in vitro. However, in in vivo studies related to inflammatory disorders, 1,25(OH)2D3 has been demonstrated to induce an anti-inflam...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep34469

    authors: Bhatt K,Rafi W,Shah N,Christakos S,Salgame P

    更新日期:2016-10-04 00:00:00

  • MycoCAP - Mycobacterium Comparative Analysis Platform.

    abstract::Mycobacterium spp. are renowned for being the causative agent of diseases like leprosy, Buruli ulcer and tuberculosis in human beings. With more and more mycobacterial genomes being sequenced, any knowledge generated from comparative genomic analysis would provide better insights into the biology, evolution, phylogeny...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep18227

    authors: Choo SW,Ang MY,Dutta A,Tan SY,Siow CC,Heydari H,Mutha NV,Wee WY,Wong GJ

    更新日期:2015-12-15 00:00:00

  • Synergy of AERONET and MODIS AOD products in the estimation of PM2.5 concentrations in Beijing.

    abstract::Satellite aerosol optical depth (AOD) is widely used to estimate particulate matter with aerodynamic diameter ≤2.5 µm (PM2.5) mass concentrations. Polar orbiting satellite retrieval 1-2 times each day is frequently affected by cloud, snow cover or misclassification of heavy pollution. Novel methods are therefore requi...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-28535-2

    authors: Fu D,Xia X,Wang J,Zhang X,Li X,Liu J

    更新日期:2018-07-05 00:00:00

  • Machine Learning and Network Analyses Reveal Disease Subtypes of Pancreatic Cancer and their Molecular Characteristics.

    abstract::Given that the biological processes governing the oncogenesis of pancreatic cancers could present useful therapeutic targets, there is a pressing need to molecularly distinguish between different clinically relevant pancreatic cancer subtypes. To address this challenge, we used targeted proteomics and other molecular ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-58290-2

    authors: Sinkala M,Mulder N,Martin D

    更新日期:2020-01-27 00:00:00

  • Sensitivity to near-future CO2 conditions in marine crabs depends on their compensatory capacities for salinity change.

    abstract::Marine crabs inhabit shallow coastal/estuarine habitats particularly sensitive to climate change, and yet we know very little about the diversity of their responses to environmental change. We report the effects of a rarely studied, but increasingly prevalent, combination of environmental factors, that of near-future ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-34089-0

    authors: Whiteley NM,Suckling CC,Ciotti BJ,Brown J,McCarthy ID,Gimenez L,Hauton C

    更新日期:2018-10-23 00:00:00

  • A random Q-switched fiber laser.

    abstract::Extensive studies have been performed on random lasers in which multiple-scattering feedback is used to generate coherent emission. Q-switching and mode-locking are well-known routes for achieving high peak power output in conventional lasers. However, in random lasers, the ubiquitous random cavities that are formed b...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep09338

    authors: Tang Y,Xu J

    更新日期:2015-03-23 00:00:00

  • A new approach for highly accurate, remote temperature probing using magnetic nanoparticles.

    abstract::In this study, we report on a new approach for remote temperature probing that provides accuracy as good as 0.017°C (0.0055% accuracy) by measuring the magnetisation curve of magnetic nanoparticles. We included here the theoretical model construction and the inverse calculation method, and explored the impact caused b...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep06338

    authors: Zhong J,Liu W,Kong L,Morais PC

    更新日期:2014-10-15 00:00:00

  • Curing the Toxicity of Multi-Walled Carbon Nanotubes through Native Small-molecule Drugs.

    abstract::With the development and application of nanotechnology, large amounts of nanoparticles will be potentially released to the environment and possibly cause many severe health problems. Although the toxicity of nanoparticles has been investigated, prevention and treatment of damages caused by nanoparticles have been rare...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-02770-5

    authors: Qi W,Tian L,An W,Wu Q,Liu J,Jiang C,Yang J,Tang B,Zhang Y,Xie K,Wang X,Li Z,Wu W

    更新日期:2017-06-06 00:00:00

  • On the contributing role of the transmembrane domain for subunit-specific sensitivity of integrin activation.

    abstract::Integrins are α/β heterodimeric transmembrane adhesion receptors. Evidence exists that their transmembrane domain (TMD) separates upon activation. Subunit-specific differences in activation sensitivity of integrins were reported. However, whether sequence variations in the TMD lead to differential TMD association has ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-23778-5

    authors: Pagani G,Gohlke H

    更新日期:2018-04-10 00:00:00

  • Global patterns of insect diversification: towards a reconciliation of fossil and molecular evidence?

    abstract::Macroevolutionary studies of insects at diverse taxonomic scales often reveal dynamic evolutionary patterns, with multiple inferred diversification rate shifts. Responses to major past environmental changes, such as the Cretaceous Terrestrial Revolution, or the development of major key innovations, such as wings or co...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep19208

    authors: Condamine FL,Clapham ME,Kergoat GJ

    更新日期:2016-01-18 00:00:00

  • A newly isolated strain of Halomonas sp. (HA1) exerts anticancer potential via induction of apoptosis and G2/M arrest in hepatocellular carcinoma (HepG2) cell line.

    abstract::Marine bacterial strains are of great interest for their ability to produce secondary metabolites with anticancer potentials. Isolation, identification, characterization and anticancer activities of isolated bacteria from El-Hamra Lake, Wadi El-Natrun (Egypt) were the objectives of this study. The isolated bacteria we...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-70945-8

    authors: El-Garawani IM,El-Sabbagh SM,Abbas NH,Ahmed HS,Eissa OA,Abo-Atya DM,Khalifa SAM,El-Seedi HR

    更新日期:2020-08-21 00:00:00

  • Symmetry-restoring quantum phase transition in a two-dimensional spinor condensate.

    abstract::Bose Einstein condensates of spin-1 atoms are known to exist in two different phases, both having spontaneously broken spin-rotation symmetry, a ferromagnetic and a polar condensate. Here we show that in two spatial dimensions it is possible to achieve a quantum phase transition from a polar condensate into a singlet ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-30876-x

    authors: Chudnovskiy AL,Cheianov V

    更新日期:2018-08-20 00:00:00

  • Noise Response Data Reveal Novel Controllability Gramian for Nonlinear Network Dynamics.

    abstract::Control of nonlinear large-scale dynamical networks, e.g., collective behavior of agents interacting via a scale-free connection topology, is a central problem in many scientific and engineering fields. For the linear version of this problem, the so-called controllability Gramian has played an important role to quanti...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep27300

    authors: Kashima K

    更新日期:2016-06-06 00:00:00

  • Virtual screening of anti-HIV1 compounds against SARS-CoV-2: machine learning modeling, chemoinformatics and molecular dynamics simulation based analysis.

    abstract::COVID-19 caused by the SARS-CoV-2 is a current global challenge and urgent discovery of potential drugs to combat this pandemic is a need of the hour. 3-chymotrypsin-like cysteine protease (3CLpro) enzyme is the vital molecular target against the SARS-CoV-2. Therefore, in the present study, 1528 anti-HIV1compounds wer...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-77524-x

    authors: Nand M,Maiti P,Joshi T,Chandra S,Pande V,Kuniyal JC,Ramakrishnan MA

    更新日期:2020-11-23 00:00:00

  • Electrically Tunable and Negative Schottky Barriers in Multi-layered Graphene/MoS2 Heterostructured Transistors.

    abstract::We fabricated multi-layered graphene/MoS2 heterostructured devices by positioning mechanically exfoliated bulk graphite and single-crystalline 2H-MoS2 onto Au metal pads on a SiO2/Si substrate via a contamination-free dry transfer technique. We also studied the electrical transport properties of Au/MoS2 junction devic...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep13743

    authors: Qiu D,Kim EK

    更新日期:2015-09-03 00:00:00

  • Inhibition of kinase IKKβ suppresses cellular abnormalities induced by the human papillomavirus oncoprotein HPV 18E6.

    abstract::Human papillomavirus (HPV) is the leading cause of cervical cancer and has been implicated in several other cancer types including vaginal, vulvar, penile, and oropharyngeal cancers. Despite the recent availability of a vaccine, there are still over 310,000 deaths each year worldwide. Current treatments for HPV-mediat...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-80193-5

    authors: Padash Barmchi M,Thomas M,Thatte JV,Vats A,Zhang B,Cagan RL,Banks L

    更新日期:2021-01-13 00:00:00

  • Rapid Sensing of Key Quality Components in Black Tea Fermentation Using Electrical Characteristics Coupled to Variables Selection Algorithms.

    abstract::Based on the electrical characteristic detection technology, the quantitative prediction models of sensory score and physical and chemical quality Index (theaflavins, thearubigins, and theabrownins) were established by using the fermented products of Congou black tea as the research object. The variation law of electr...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-58637-9

    authors: Dong C,An T,Zhu H,Wang J,Hu B,Jiang Y,Yang Y,Li J

    更新日期:2020-01-31 00:00:00

  • Rapid phenotypic individualization of bacterial sister cells.

    abstract::A growing bacterium typically divides into two genetically identical and morphologically similar sister cells and eventually gives rise to a clonal population. Nevertheless, significant phenotypic differentiation among isogenic cells frequently occurs, with the resulting heterogeneity in cellular behavior often ensuri...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-08660-0

    authors: Govers SK,Adam A,Blockeel H,Aertsen A

    更新日期:2017-08-16 00:00:00

  • Guanine crystals regulated by chitin-based honeycomb frameworks for tunable structural colors of sapphirinid copepod, Sapphirina nigromaculata.

    abstract::Sapphirinid copepods, which are marine zooplankton, exhibit tunable structural colors originating from a layered structure of guanine crystal plates. In the present study, the coloring portion of adult male of a sapphirinid copepod, Sapphirina nigromaculata, under the dorsal body surface was characterized to clarify t...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-59090-4

    authors: Kimura T,Takasaki M,Hatai R,Nagai Y,Uematsu K,Oaki Y,Osada M,Tsuda H,Ishigure T,Toyofuku T,Shimode S,Imai H

    更新日期:2020-02-10 00:00:00

  • Experimental Realization of a Quantum Pentagonal Lattice.

    abstract::Geometric frustration, in which competing interactions give rise to degenerate ground states, potentially induces various exotic quantum phenomena in magnetic materials. Minimal models comprising triangular units, such as triangular and Kagome lattices, have been investigated for decades to realize novel quantum phase...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep15327

    authors: Yamaguchi H,Okubo T,Kittaka S,Sakakibara T,Araki K,Iwase K,Amaya N,Ono T,Hosokoshi Y

    更新日期:2015-10-15 00:00:00

  • Metabolic response induced by parasitic plant-fungus interactions hinder amino sugar and nucleotide sugar metabolism in the host.

    abstract::Infestation by the biotrophic pathogen Gymnosporangium asiaticum can be devastating for plant of the family Rosaceae. However, the phytopathology of this process has not been thoroughly elucidated. Using a metabolomics approach, we discovered the intrinsic activities that induce disease symptoms after fungal invasion ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep37434

    authors: Lee DK,Ahn S,Cho HY,Yun HY,Park JH,Lim J,Lee J,Kwon SW

    更新日期:2016-11-28 00:00:00

  • Targeting HCCR expression resensitizes gastric cancer cells to chemotherapy via down-regulating the activation of STAT3.

    abstract::The human cervical cancer oncogene (HCCR) has been found to be overexpressed in a variety of human cancers. However, the level of expression of HCCR and its biological function in gastric cancer are largely unknown. In this study, we evaluated HCCR expression in several gastric cancer cell lines and in one normal gast...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep24196

    authors: Zhang JL,Liu XZ,Wang PY,Chen GW,Jiang Y,Qiao SK,Zhu J,Wang X,Pan YS,Liu YC

    更新日期:2016-04-07 00:00:00

  • Hybrid Modelling of Transarterial Chemoembolisation Therapies (TACE) for Hepatocellular Carcinoma (HCC).

    abstract::We extend an agent-based multiscale model of vascular tumour growth and angiogenesis to describe transarterial chemoembolisation (TACE) therapies. The model accounts for tumour and normal cells that are both nested in a vascular system that changes its structure according to tumour-related growth factors. Oxygen promo...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-65012-1

    authors: Perfahl H,Jain HV,Joshi T,Horger M,Malek N,Bitzer M,Reuss M

    更新日期:2020-06-29 00:00:00

  • Tree-ring width reveals the preparation of the 1974 Mt. Etna eruption.

    abstract::Reduced near-infrared reflectance observed in September 1973 in Skylab images of the western flank of Mt. Etna has been interpreted as an eruption precursor of the January 1974 eruption. Until now, it has been unclear when this signal started, whether it was sustained and which process(es) could have caused it. By ana...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep44019

    authors: Seiler R,Houlié N,Cherubini P

    更新日期:2017-03-07 00:00:00

  • Safety and Metabolism of Long-term Administration of NIAGEN (Nicotinamide Riboside Chloride) in a Randomized, Double-Blind, Placebo-controlled Clinical Trial of Healthy Overweight Adults.

    abstract::Nicotinamide riboside (NR) is a newly discovered nicotinamide adenine dinucleotide (NAD+) precursor vitamin. A crystal form of NR chloride termed NIAGEN is generally recognized as safe (GRAS) for use in foods and the subject of two New Dietary Ingredient Notifications for use in dietary supplements. To evaluate the ki...

    journal_title:Scientific reports

    pub_type: 杂志文章,随机对照试验

    doi:10.1038/s41598-019-46120-z

    authors: Conze D,Brenner C,Kruger CL

    更新日期:2019-07-05 00:00:00

  • New endoscopic procedure for bladder wall closure: results from the porcine model.

    abstract::Upper urinary tract urothelial carcinomas are usually managed by radical nephroureterectomy (RNU), often followed by intravesical chemotherapy to minimize recurrence. Open surgery is the gold standard procedure for RNU, but it associates with high morbidity, and it has been increasingly replaced by minimally invasive ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-54304-w

    authors: Oliveira C,Barros AA,Reis RL,Correia-Pinto J,Lima E

    更新日期:2019-12-10 00:00:00

  • Elevated Serum Interleukin-34 Level in Patients with Systemic Lupus Erythematosus Is Associated with Disease Activity.

    abstract::We measured the interleukin-34 (IL-34) level in sera from patients with systemic lupus erythematosus (SLE) and discoid lupus erythematosus (DLE) using an enzyme-linked immunosorbent assay (ELISA). Blood tests, including assays to determine C-reactive protein (CRP), complement (C) 3, C4, immunoglobulin (Ig) A, IgG, IgM...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-21859-z

    authors: Xie HH,Shen H,Zhang L,Cui MY,Xia LP,Lu J

    更新日期:2018-02-22 00:00:00

  • Analysis of the genetic association between IL27 variants and coronary artery disease in a Chinese Han population.

    abstract::Interleukin-27 (IL-27) is an important cytokine in inflammatory diseases, including coronary artery disease (CAD). To explore the precise role of IL-27 in CAD, we investigated the genetic association between IL27 and CAD in the GeneID Chinese Han population. A two-stage case control association analysis was performed ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep25782

    authors: Fan Q,Nie S,Li S,Liao Y,Zhang H,Zha L,Wang F,Tang T,Xia N,Xu C,Wang P,Xie T,Xie J,Lu Q,Li Q,Qian J,Li B,Wu G,Wu Y,Yang Y,Wang QK,Tu X,Cheng X

    更新日期:2016-05-12 00:00:00