Lipidomic profiling of model organisms and the world's major pathogens.

Abstract:

:Lipidomics is a subspecialty of metabolomics that focuses on water insoluble metabolites that form membrane barriers. Most lipidomic databases catalog lipids from common model organisms, like humans or Escherichia coli. However, model organisms' lipid profiles show surprisingly little overlap with those of specialized pathogens, creating the need for organism-specific lipidomic databases. Here we review rapid progress in lipidomic platform development with regard to chromatography, detection and bioinformatics. We emphasize new methods of comparative lipidomics, which use aligned datasets to identify lipids changed after introducing a biological variable. These new methods provide an unprecedented ability to broadly and quantitatively describe lipidic change during biological processes and identify changed lipids with low error rates.

journal_name

Biochimie

journal_title

Biochimie

authors

Layre E,Moody DB

doi

10.1016/j.biochi.2012.08.012

subject

Has Abstract

pub_date

2013-01-01 00:00:00

pages

109-15

issue

1

eissn

0300-9084

issn

1638-6183

pii

S0300-9084(12)00336-7

journal_volume

95

pub_type

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