Abstract:
:Currently, only three phages that infect the medically important bacterium Clostridium difficile have been discussed by the International Committee of Viral Taxonomy (ICTV). They are all myoviruses, and have been assigned to the genus "phicd119likevirus". An additional nine phages have since been described in the literature with their genome data available. The Phicd119likevirus is named after the type species: the myovirus ΦCD119 which was the first C. difficile phage to be sequenced. The two additional myoviruses, ϕCD27 and φC2, also fall into this genus based on the similarity of their genome and morphological characteristics. The other nine phages have not been assigned to this genus, and four of them do not fit the criteria for the current taxonomic grouping. We have applied protein clustering analysis to determine their phylogenetic relationships. From these results we propose an additional myoviridae genus, that we term "phiMMP04likevirus".
journal_name
Virusesjournal_title
Virusesauthors
Hargreaves KR,Clokie MRdoi
10.3390/v7052534subject
Has Abstractpub_date
2015-05-21 00:00:00pages
2534-41issue
5issn
1999-4915pii
v7052534journal_volume
7pub_type
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