Molecular analysis of base damage clustering associated with a site-specific radiation-induced DNA double-strand break.

Abstract:

:Base damage flanking a radiation-induced DNA double-strand break (DSB) may contribute to DSB complexity and affect break repair. However, to date, an isolated radiation-induced DSB has not been assessed for such structures at the molecular level. In this study, an authentic site-specific radiation-induced DSB was produced in plasmid DNA by triplex forming oligonucleotide-targeted (125)I decay. A restriction fragment terminated by the DSB was isolated and probed for base damage with the E. coli DNA repair enzymes endonuclease III and formamidopyrimidine-DNA glycosylase. Our results demonstrate base damage clustering within 8 bases of the (125)I-targeted base in the DNA duplex. An increased yield of base damage (purine > pyrimidine) was observed for DSBs formed by irradiation in the absence of DMSO. An internal control fragment 1354 bp upstream from the targeted base was insensitive to enzymatic probing, indicating that the damage detected proximal to the DSB was produced by the (125)I decay that formed the DSB. Gas chromatography-mass spectrometry identified three types of damaged bases in the approximately 32-bp region proximal to the DSB. These base lesions were 8-hydroxyguanine, 8-hydroxyadenine and 5-hydroxycytosine. Finally, evidence is presented for base damage >24 bp upstream from the (125)I-decay site that may form via a charge migration mechanism.

journal_name

Radiat Res

journal_title

Radiation research

authors

Datta K,Jaruga P,Dizdaroglu M,Neumann RD,Winters TA

doi

10.1667/RR0628.1

subject

Has Abstract

pub_date

2006-11-01 00:00:00

pages

767-81

issue

5

eissn

0033-7587

issn

1938-5404

pii

RR0628

journal_volume

166

pub_type

杂志文章
  • The Exploitation of Low-Energy Electrons in Cancer Treatment.

    abstract::Given the distinct characteristics of low-energy electrons (LEEs), particularly at energies less than 30 eV, they can be applied to a wide range of therapeutic modalities to improve cancer treatment. LEEs have been shown to efficiently produce complex molecular damage resulting in substantial cellular toxicities. Sinc...

    journal_title:Radiation research

    pub_type: 杂志文章,评审

    doi:10.1667/RR14727.1

    authors: Rezaee M,Hill RP,Jaffray DA

    更新日期:2017-08-01 00:00:00

  • Frequent chest X-ray fluoroscopy and breast cancer incidence among tuberculosis patients in Massachusetts.

    abstract::The incidence of breast cancer was determined in 4940 women treated for tuberculosis between 1925 and 1954 in Massachusetts. Among 2573 women examined by X-ray fluoroscopy an average of 88 times during lung collapse therapy and followed for an average of 30 years, 147 breast cancers occurred in contrast to 113.6 expec...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:

    authors: Boice JD Jr,Preston D,Davis FG,Monson RR

    更新日期:1991-02-01 00:00:00

  • Base Release and Modification in Solid-Phase DNA Exposed to Low-Energy Electrons.

    abstract::Ionization generates a large number of secondary low-energy electrons (LEEs) with a most probable energy of approximately 10 eV, which can break DNA bonds by dissociative electron attachment (DEA) and lead to DNA damage. In this study, we investigated radiation damage to dry DNA induced by X rays (1.5 keV) alone on a ...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:10.1667/RR14476.1

    authors: Choofong S,Cloutier P,Sanche L,Wagner JR

    更新日期:2016-11-01 00:00:00

  • Histopathological and morphometric study of the late effects of heavy-ion irradiation on the spinal cord of the rat.

    abstract::The late effects of heavy-ion irradiation on the spinal cord of the rat were investigated histologically and morphometrically. After a single exposure of each animal's lower thoracic and lumbar spinal cord to a carbon-ion beam, the animals were observed clinically for up to 69 weeks and their spinal cords were examine...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:

    authors: Okada S,Okeda R,Matsushita S,Kawano A

    更新日期:1998-09-01 00:00:00

  • Mitochondrial complex II dysfunction can contribute significantly to genomic instability after exposure to ionizing radiation.

    abstract::Ionizing radiation induces chronic metabolic oxidative stress and a mutator phenotype in hamster fibroblasts that is mediated by H(2)O(2), but the intracellular source of H(2)O(2) is not well defined. To determine the role of mitochondria in the radiation-induced mutator phenotype, end points of mitochondrial function...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:10.1667/RR1617.1

    authors: Dayal D,Martin SM,Owens KM,Aykin-Burns N,Zhu Y,Boominathan A,Pain D,Limoli CL,Goswami PC,Domann FE,Spitz DR

    更新日期:2009-12-01 00:00:00

  • Yields of clustered DNA damage induced by charged-particle radiations of similar kinetic energy per nucleon: LET dependence in different DNA microenvironments.

    abstract::To determine the linear energy transfer (LET) dependence of the biological effects of densely ionizing radiation in relation to changes in the ionization density along the track, we measured the yields and spectrum of clustered DNA damages induced by charged particles of different atomic number but similar kinetic ene...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:10.1667/RR2093.1

    authors: Keszenman DJ,Sutherland BM

    更新日期:2010-08-01 00:00:00

  • Dietary selenium for the mitigation of radiation injury: effects of selenium dose escalation and timing of supplementation.

    abstract::We recently reported that daily dietary supplementation with 100 µg selenium (a dose exceeding a rat's nutritional requirement by about 33-fold) initiated immediately after total-body irradiation (TBI) and maintained for 21 weeks mitigates radiation nephropathy in a rat model as indicated by blood urea nitrogen (BUN) ...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:10.1667/rr2456.1

    authors: Sieber F,Muir SA,Cohen EP,Fish BL,Mäder M,Schock AM,Althouse BJ,Moulder JE

    更新日期:2011-09-01 00:00:00

  • Mechanism for 193-nm laser radiation-induced effects on mammalian cells.

    abstract::The cellular sites for damage in mammalian cells caused by 193-nm radiation from an argon fluoride excimer laser were investigated. The ability of Chinese hamster ovary cells to reduce a tetrazolium dye (MTT) was decreased to 37% of unirradiated control by 2.5 x 10(3) J/m2 of 193-nm radiation when measured either 4 or...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:

    authors: Kochevar IE,Walsh AA,Held KD,Gallo RL,Mirro J

    更新日期:1990-05-01 00:00:00

  • Exposure to ≤15 cGy of 600 MeV/n 56Fe Particles Impairs Rule Acquisition but not Long-Term Memory in the Attentional Set-Shifting Assay.

    abstract::On future missions into deep space, astronauts will be required to work more autonomously than on previous missions, and thus their ability to perform executive functions could be critical to mission success. In this study, we determined the effect that ≤15 cGy of 600 MeV/n 56Fe particles has on attentional set-shifti...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:10.1667/RR15085.1

    authors: Jewell JS,Duncan VD,Fesshaye A,Tondin A,Macadat E,Britten RA

    更新日期:2018-12-01 00:00:00

  • Modified absorptive and secretory processes in the rat distal colon after neutron irradiation: in vivo and in vitro studies.

    abstract::Impaired fluid and electrolyte transport in the intestine is a well-recognized characteristic of radiation-induced pathologies in the gastrointestinal tract. The aim of this study was to investigate the responsiveness of the epithelium of the colon of the rat to electrical and pharmacological (serotonin, carbachol) st...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:

    authors: François A,Dublineau I,Lebrun F,Ksas B,Griffiths NM

    更新日期:1999-04-01 00:00:00

  • Fruit Flies Provide New Insights in Low-Radiation Background Biology at the INFN Underground Gran Sasso National Laboratory (LNGS).

    abstract::Deep underground laboratories (DULs) were originally created to host particle, astroparticle or nuclear physics experiments requiring a low-background environment with vastly reduced levels of cosmic-ray particle interference. More recently, the range of science projects requiring an underground experiment site has gr...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:10.1667/RR15083.1

    authors: Morciano P,Cipressa F,Porrazzo A,Esposito G,Tabocchini MA,Cenci G

    更新日期:2018-09-01 00:00:00

  • Studies of the mortality of atomic bomb survivors, Report 14, 1950-2003: an overview of cancer and noncancer diseases.

    abstract::This is the 14th report in a series of periodic general reports on mortality in the Life Span Study (LSS) cohort of atomic bomb survivors followed by the Radiation Effects Research Foundation to investigate the late health effects of the radiation from the atomic bombs. During the period 1950-2003, 58% of the 86,611 L...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:10.1667/rr2629.1

    authors: Ozasa K,Shimizu Y,Suyama A,Kasagi F,Soda M,Grant EJ,Sakata R,Sugiyama H,Kodama K

    更新日期:2012-03-01 00:00:00

  • The Effect of Low-Dose Gamma Irradiation on the Uptake of Boronophenylalanine to Enhance the Efficacy of Boron Neutron Capture Therapy in an Orthotopic Oral Cancer Model.

    abstract::The success of boron neutron capture therapy (BNCT) mainly depends on the boron concentration in the tumor and a high tumor/normal tissue (T/N) boron ratio or a high tumor/blood (T/B) boron ratio. Therefore, the effective enhancement of boron ratios is the first priority. Our study investigated whether a low-dose of γ...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:10.1667/RADE-20-00102.1

    authors: Lin YC,Chou FI,Liao JW,Liu YH,Hwang JJ

    更新日期:2021-01-29 00:00:00

  • Modification of the theory of dual radiation action for attenuated fields. II. Application to the analysis of soft X-ray results.

    abstract::A formalism developed in the first paper in this series, based on the generalized Theory of Dual Radiation Action, is applied to survival data for cells exposed to soft X rays. It is shown that, in contrast to previous published analyses, this formalism--modified to account for the attenuation of dose across the sensi...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:

    authors: Brenner DJ,Zaider M

    更新日期:1984-09-01 00:00:00

  • Hypoadrenocorticism in beagles exposed to aerosols of plutonium-238 dioxide by inhalation.

    abstract::Hypoadrenocorticism, known as Addison's disease in humans, was diagnosed in six beagles after inhalation of at least 1.7 kBq/g lung of 238PuO2. Histological examination of adrenal gland specimens obtained at necropsy revealed marked adrenal cortical atrophy in all cases. Autoradiographs showed only slight alpha-partic...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:

    authors: Weller RE,Buschbom RL,Dagle GE,Park JF,Ragan HA,Watson CR

    更新日期:1996-12-01 00:00:00

  • Plutonium-catalyzed oxidative DNA damage in the absence of significant alpha-particle decay.

    abstract::Plutonium is considered to be a carcinogen because it emits alpha particles that may result in the irradiation of stem cell population. In the present study we show that plutonium can also catalyze reactions that induce hydroxyl radicals in the absence of significant alpha-particle irradiation. Using the low specific ...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:

    authors: Claycamp HG,Luo D

    更新日期:1994-01-01 00:00:00

  • Prevention and treatment of the gastric symptoms of radiation sickness.

    abstract::Currently available treatments for radiation-induced nausea and vomiting either are ineffective or reduce performance. The new antiemetic and gastrokinetic agent zacopride was tested in rhesus monkeys to assess its behavioral toxicity and its ability to inhibit radiation-induced emesis. Zacopride (intragastric, 0.3 mg...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:

    authors: Dubois A,Fiala N,Boward CA,Bogo V

    更新日期:1988-09-01 00:00:00

  • Radiation Biomarkers: Can Small Businesses Drive Accurate Radiation Precision Medicine?

    abstract::Radiation therapy is an essential component of cancer treatment. Currently, tumor control and normal tissue complication probabilities derived from a general patient population guide radiation treatment. Its outcome could be improved if radiation biomarkers could be incorporated into approaches to treatment. A substan...

    journal_title:Radiation research

    pub_type: 杂志文章,评审

    doi:10.1667/RR15553.1

    authors: Prasanna PGS,Narayanan D,Zhang K,Rahbar A,Coleman CN,Vikram B

    更新日期:2020-03-01 00:00:00

  • Relative contribution of bystander and targeted cell killing to the low-dose region of the radiation dose-response curve.

    abstract::Human keratinocytes show a bystander effect when exposed to low doses of low-LET radiation. In this paper, data are presented showing a method of correcting the overall survival curve to enable analysis of the relative contributions of the bystander effect and the effect attributable to direct interaction of the radia...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:10.1667/0033-7587(2000)153[0508:rcobat]2.0.co;2

    authors: Seymour CB,Mothersill C

    更新日期:2000-05-01 00:00:00

  • Upper dose thresholds for radiation-induced adaptive response against cancer in high-dose-exposed, cancer-prone, radiation-sensitive Trp53 heterozygous mice.

    abstract::Trp53 heterozygous mice are radiation-sensitive and cancer-prone. Groups of 7-8-week-old female Trp53 heterozygous mice were exposed to 4 Gy of 60Co gamma radiation at high (0.5 Gy/min) or low (0.5 mGy/min) dose rate. Other groups received 10 or 100 mGy at low dose rate 24 h prior to the 4-Gy dose. Tumor frequency and...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:10.1667/rr3190

    authors: Mitchel RE,Jackson JS,Carlisle SM

    更新日期:2004-07-01 00:00:00

  • On the question of the cause of the initial slope of survival curves.

    abstract::In the double-strand break (DSB) model, the initial slope (alpha) of the survival curve is determined by the number of DSBs remaining unrepaired at a certain time after irradiation. There are three types of calculations which confirm the validity of this approach. First, the model quite reasonably predicts the low-LET...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:

    authors: Ostashevsky JY

    更新日期:1993-02-01 00:00:00

  • Comparison of the induction of pulmonary neoplasms in Sprague-Dawley rats by fission neutrons and radon daughters.

    abstract::Pulmonary carcinomas were recorded in a life-span experiment of male Sprague-Dawley rats exposed to fission neutrons. Mortality-corrected prevalences are obtained by the method of isotonic regression. In a second part of the paper a comparison is made with data obtained earlier for radon-daughter inhalations in the sa...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:

    authors: Chmelevsky D,Kellerer AM,Lafuma J,Morin M,Masse R

    更新日期:1984-06-01 00:00:00

  • Spontaneous and nitrosourea-induced primary tumors of the central nervous system in Fischer 344 rats chronically exposed to 836 MHz modulated microwaves.

    abstract::We have tested an 836.55 MHz field with North American Digital Cellular (NADC) modulation in a 2-year animal bioassay that included fetal exposure. In offspring of pregnant Fischer 344 rats, we tested both spontaneous tumorigenicity and the incidence of induced central nervous system (CNS) tumors after a single dose o...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:

    authors: Adey WR,Byus CV,Cain CD,Higgins RJ,Jones RA,Kean CJ,Kuster N,MacMurray A,Stagg RB,Zimmerman G,Phillips JL,Haggren W

    更新日期:1999-09-01 00:00:00

  • Comparison of the gastrointestinal syndrome after total-body or total-abdominal irradiation.

    abstract::In pathogen-free mice, but not standard conventionally housed laboratory rodents, two distinctly different modes of early radiation lethality can be identified by modifying the irradiation technique (total-body versus abdominal irradiation) or by therapeutic intervention such as rescue of total-body-irradiated mice wi...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:

    authors: Mason KA,Withers HR,McBride WH,Davis CA,Smathers JB

    更新日期:1989-03-01 00:00:00

  • Estimation of mutation induction rates in AT-rich sequences using a genome scanning approach after X irradiation of mouse spermatogonia.

    abstract::We have previously used NotI as the marker enzyme (recognizing GCGGCCGC) in a genome scanning approach for detection of mutations induced in mouse spermatogonia and estimated the mutation induction rate as about 0.7 x 10(-5) per locus per Gy. To see whether different parts of the genome have different sensitivities fo...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:10.1667/RR0926.1

    authors: Asakawa J,Nakamura N,Katayama H,Cullings HM

    更新日期:2007-08-01 00:00:00

  • Lung cancer in French and Czech uranium miners: Radon-associated risk at low exposure rates and modifying effects of time since exposure and age at exposure.

    abstract::Radon is recognized as a public health concern for indoor exposure. Precise quantification derived from occupational exposure in miners is still needed for estimating the risk and the factors that modify the dependence on cumulated exposure. The present paper reports on relationship between radon exposure and lung can...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:10.1667/RR0848.1

    authors: Tomasek L,Rogel A,Tirmarche M,Mitton N,Laurier D

    更新日期:2008-02-01 00:00:00

  • Consuming a Ketogenic Diet while Receiving Radiation and Chemotherapy for Locally Advanced Lung Cancer and Pancreatic Cancer: The University of Iowa Experience of Two Phase 1 Clinical Trials.

    abstract::Ketogenic diets are low in carbohydrates and high in fat, which forces cells to rely more heavily upon mitochondrial oxidation of fatty acids for energy. Relative to normal cells, cancer cells are believed to exist under a condition of chronic mitochondrial oxidative stress that is compensated for by increases in gluc...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:10.1667/RR14668.1

    authors: Zahra A,Fath MA,Opat E,Mapuskar KA,Bhatia SK,Ma DC,Rodman SN III,Snyders TP,Chenard CA,Eichenberger-Gilmore JM,Bodeker KL,Ahmann L,Smith BJ,Vollstedt SA,Brown HA,Hejleh TA,Clamon GH,Berg DJ,Szweda LI,Spitz DR,Buat

    更新日期:2017-06-01 00:00:00

  • Cytogenetic effects of high-energy iron ions: dependence on shielding thickness and material.

    abstract::We report results for chromosomal aberrations in human peripheral blood lymphocytes after they were exposed to high-energy iron ions with or without shielding at the HIMAC, AGS and NSRL accelerators. Isolated lymphocytes were exposed to iron ions with energies between 200 and 5000 MeV/nucleon in the 0.1-1-Gy dose rang...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:10.1667/rr3362.1

    authors: Durante M,George K,Gialanella G,Grossi G,La Tessa C,Manti L,Miller J,Pugliese M,Scampoli P,Cucinotta FA

    更新日期:2005-10-01 00:00:00

  • Binucleate cell formation correlates to loss of colony-forming ability in X-irradiated cultured mammalian cells.

    abstract::The relationship between binucleate cell formation and the loss of colony-forming ability was examined in several cultured mammalian cell lines irradiated with X rays. The maximum fraction of binucleate cells after X irradiation increased dose-dependently within the range in which reproductive cell death might predomi...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:

    authors: Sasaki H,Yoshinaga H,Kura S

    更新日期:1986-12-01 00:00:00

  • Ionizing radiation-induced cell death is partly caused by increase of mitochondrial reactive oxygen species in normal human fibroblast cells.

    abstract::Radiation-induced cell death is thought to be caused by nuclear DNA damage that cannot be repaired. However, in this study we found that a delayed increase of mitochondrial reactive oxygen species (ROS) is responsible for some of the radiation-induced cell death in normal human fibroblast cells. We have previously rep...

    journal_title:Radiation research

    pub_type: 杂志文章

    doi:10.1667/RR13772.1

    authors: Kobashigawa S,Kashino G,Suzuki K,Yamashita S,Mori H

    更新日期:2015-04-01 00:00:00