Molecular characterization of vernalization response genes in Canadian spring wheat.

Abstract:

:Vernalization response (Vrn) genes play a major role in determining the flowering/maturity times of spring-sown wheat. We characterized a representative set of 40 western Canadian adapted spring wheat cultivars/lines for 3 Vrn loci. The 40 genotypes were screened, along with 4 genotypes of known Vrn genes, using previously published genome-specific polymerase chain reaction primers designed for detecting the presence or absence of dominant or recessive alleles of the major Vrn loci: Vrn-A1, Vrn-B1, and Vrn-D1. The dominant promoter duplication allele Vrn-A1a was present in 34 of 40 cultivars/lines, whereas the promoter deletion allele Vrn-A1b was present in only 1 of the western Canadian cultivars (Triticum aestivum L. 'Rescue') and 2 of its derivative chromosomal substitution lines. The intron deletion allele Vrn-A1c was not present in any line tested. Only 4 of the western Canadian spring wheat cultivars tested here carry the recessive vrn-A1 allele. The dominant allele of Vrn-B1 was detected in 20 cultivars/lines. Fourteen cultivars/lines had dominant alleles of Vrn-A1a and Vrn-B1 in combination. All cultivars/lines carried the recessive allele for Vrn-D1. The predominance of the dominant allele Vrn-A1a in Canadian spring wheat appears to be due to the allele's vernalization insensitivity, which confers earliness under nonvernalizing growing conditions. Wheat breeders in western Canada have incorporated the Vrn-A1a allele into spring wheats mainly by selecting for early genotypes for a short growing season, thereby avoiding early and late season frosts. For the development of early maturing cultivars with high yield potential, different combinations of Vrn alleles may be incorporated into spring wheat breeding programs in western Canada.

journal_name

Genome

journal_title

Genome

authors

Iqbal M,Navabi A,Yang RC,Salmon DF,Spaner D

doi

10.1139/g07-028

subject

Has Abstract

pub_date

2007-05-01 00:00:00

pages

511-6

issue

5

eissn

0831-2796

issn

1480-3321

pii

g07-028

journal_volume

50

pub_type

杂志文章

相关文献

GENOME文献大全
  • The HtrA2 Drosophila model of Parkinson's disease is suppressed by the pro-survival Bcl-2 Buffy.

    abstract::Mutations in High temperature requirement A2 (HtrA2), also designated PARK13, which lead to the loss of its protease activity, have been associated with Parkinson's disease (PD). HtrA2 is a mitochondrial protease that translocates to the cytosol upon the initiation of apoptosis where it participates in the abrogation ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2016-0069

    authors: M'Angale PG,Staveley BE

    更新日期:2017-01-01 00:00:00

  • Alterations in subtelomeric tandem repeats during early stages of allopolyploidy in wheat.

    abstract::The genomic content of the subtelomeric repeated sequences Spelt1 and Spelt52 was studied by dot, Southern, and in situ hybridization in 11 newly synthesized amphiploids of Aegilops and Triticum, and data were compared with the parental plants. Spelt1 had reduced copy numbers in the first generation of three synthetic...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g04-044

    authors: Salina EA,Numerova OM,Ozkan H,Feldman M

    更新日期:2004-10-01 00:00:00

  • Arrays of repetitive DNA elements in the largest chromosomes of Toxoplasma gondii.

    abstract::A novel tandemly repeated DNA structure of Toxoplasma gondii that meets the requirements assigned for satellital DNA was characterized. A DNA fragment of 1002 bp contains two different elements of repetitive DNA families named ABGTg7 and ABGTg8.2. Both repeats are members of a more complex tandem structure where ABGTg...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g98-120

    authors: Matrajt M,Angel SO,Pszenny V,Guarnera E,Roos DS,Garberi JC

    更新日期:1999-04-01 00:00:00

  • Detection of large sequence insertions by a hybrid approach that combine de novo assembly and resequencing of medium-coverage genome sequences.

    abstract::Large sequence insertion (LSI) is one of the structural variations (SVs) that may cause phenotypic differences in plants. To identify the LSIs using medium-coverage sequencing data of four wild soybean (Glycine soja) genotypes, we designed a hybrid approach combining de novo assembly and read mapping. Total reads and ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2018-0027

    authors: Lee T,Kim MY,Ha J,Lee SH

    更新日期:2018-10-01 00:00:00

  • Microsatellites in the silkworm, Bombyx mori: abundance, polymorphism, and strain characterization.

    abstract::We have isolated and characterized microsatellites (simple sequence repeat (SSR) loci) from the silkworm genome. The screening of a partial genomic library by the conventional hybridization method led to the isolation of 28 microsatellites harbouring clones. The abundance of (CA)n repeats in the silkworm genome was ak...

    journal_title:Genome

    pub_type: 杂志文章

    doi:

    authors: Reddy KD,Abraham EG,Nagaraju J

    更新日期:1999-12-01 00:00:00

  • Genome flux in tomato cell clones cultured in vitro in different physiological equilibria. II. A RAPD analysis of variability.

    abstract::An analysis of the effect of changing physiological conditions on genome evolution in tomato cell populations has been carried out on long-term in vitro cultured clones grown on different auxin-cytokinin equilibria or selected for low-high competence for active defense against Fusarium oxysporum f.sp. lycopersici. RAP...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g96-107

    authors: Bogani P,Simoni A,Lio' P,Scialpi A,Buiatti M

    更新日期:1996-10-01 00:00:00

  • Genetic structure of an introduced pest, grape phylloxera (Daktulosphaira vitifoliae Fitch), in Europe.

    abstract::A model for the genetic structure of grape phylloxera populations in Europe was developed using hierarchical sampling techniques and AFLP-PCR (amplified fragment length polymorphism--polymerase chain reaction) methodology. One-hundred three European and 6 North American phylloxera populations were studied. An addition...

    journal_title:Genome

    pub_type: 杂志文章

    doi:

    authors: Forneck A,Walker MA,Blaich R

    更新日期:2000-08-01 00:00:00

  • Characterization of the hexaploid oat Avena byzantina cv. Kanota monosomic series using C-banding and RFLPs.

    abstract::The establishment of a C-banded karyotype of hexaploid oat (Avena spp., 2n = 6x = 42) has facilitated the cytological characterization of a monosomic series in 'Kanota', an A. byzantina (C. Koch) cultivar. The 'Kanota' series of monosomics analyzed in this study consists of only 12 of the 21 different chromosome-defic...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g93-126

    authors: Jellen EN,Rooney WL,Phillips RL,Rines HW

    更新日期:1993-10-01 00:00:00

  • 5S rDNA and U2 snRNA are linked in the genome of Crassostrea angulata and Crassostrea gigas oysters: does the (CT)n.(GA)n microsatellite stabilize this novel linkage of large tandem arrays?

    abstract::The 5S rRNA genes from 2 species of the Ostreidae family, Crassostrea angulata and Crassostrea gigas, were molecularly characterized. The genes were amplified, cloned, and sequenced. The results revealed a 5S rDNA tandem array with a nucleotide sequence in an inverted position within the nontranscribed spacer region t...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g05-075

    authors: Cross I,Rebordinos L

    更新日期:2005-12-01 00:00:00

  • Nematode biodiversity assessments need vouchered databases: A BOLD reference library for plant-parasitic nematodes in the superfamily Criconematoidea.

    abstract::Nematodes are frequently cited as underrepresented in faunistic surveys using DNA barcoding with COI. This underrepresentation is generally attributed to a limited presence of nematodes in DNA databases which, in turn, is often ascribed to structural variability and high evolutionary rates in nematode mitochondrial ge...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2019-0196

    authors: Powers TO,Harris TS,Higgins RS,Mullin PG,Powers KS

    更新日期:2020-06-11 00:00:00

  • Cerastoderma glaucum 5S ribosomal DNA: characterization of the repeat unit, divergence with respect to Cerastoderma edule, and PCR-RFLPs for the identification of both cockles.

    abstract::The 5S rDNA repeat unit of the cockle Cerastoderma glaucum from the Mediterranean and Baltic coasts was PCR amplified and sequenced. The length of the units was 539-568 bp, of which 120 bp were assigned to the 5S rRNA gene and 419-448 bp to the spacer region, and the G/C content was 46%-49%, 54%, and 44%-47%, respecti...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g04-123

    authors: Freire R,Insua A,Méndez J

    更新日期:2005-06-01 00:00:00

  • Genetic mapping of resistance factors to Phytophthora palmivora in cocoa.

    abstract::Phytophthora palmivora causes pod rot, a serious disease on cocoa widespread throughout the producing regions. In order to ascertain the genetic determination of cocoa resistance to P. palmivora, a study was carried out on two progenies derived from crosses between a heterozygous, moderately resistant Forastero clone,...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-44-1-79

    authors: Flament MH,Kebe I,Clément D,Pieretti I,Risterucci AM,N'Goran JA,Cilas C,Despréaux D,Lanaud C

    更新日期:2001-02-01 00:00:00

  • Construction of a genetic linkage map in celery using DNA-based markers.

    abstract::A F2 population of two celery cultivated types (Apium graveolens L. var. rapaceum and A. graveolens L. var. secalinum) was used to construct a linkage map consisting of 29 RFLP (restriction fragment length polymorphism), 100 RAPD (random amplified polymorphic DNA), four isozyme, one disease resistance, and one growth ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g95-005

    authors: Yang X,Quiros CF

    更新日期:1995-02-01 00:00:00

  • Genetic diversity and structure in the northern populations of European hazelnut (Corylus avellana L.).

    abstract::European hazelnut (Corylus avellana L.) is a strictly cross-pollinated diploid tree species, which has its northernmost populations in Fennoscandia, and it was one of the first species to recolonize northern Europe after the last ice age. Hazelnut produces edible nuts in Finland but nowadays they are underutilized as ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2018-0193

    authors: Tanhuanpää P,Heinonen M,Bitz L,Rokka VM

    更新日期:2019-08-01 00:00:00

  • Development of soybean aphid genomic SSR markers using next generation sequencing.

    abstract::Simple sequence repeats (SSRs) or microsatellites are very useful molecular markers, owing to their locus-specific codominant and multiallelic nature, high abundance in the genome, and high rates of transferability across species. The soybean aphid (Aphis glycines Matsumura) has become the most damaging insect pest of...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g11-002

    authors: Jun TH,Michel AP,Mian MA

    更新日期:2011-05-01 00:00:00

  • Comment on "Comparative genomic analysis of the whale (Pseudorca crassidens) PRNP locus".

    abstract::A reminder that another paper on the cetacean PRNP locus has been published before Kim et al.'s paper (2008. Genome, 51: 452-464) is presented along with a consideration of the related results. ...

    journal_title:Genome

    pub_type: 评论,杂志文章

    doi:10.1139/G08-091

    authors: Acutis PL,Peletto S,Grego E,Colussi S,Riina MV,Rosati S,Mignone W,Caramelli M

    更新日期:2008-12-01 00:00:00

  • Candidate disease resistance genes in sunflower cloned using conserved nucleotide-binding site motifs: genetic mapping and linkage to the downy mildew resistance gene Pl1.

    abstract::Disease resistance gene candidates (RGCs) belonging to the nucleotide-binding site (NBS) superfamily have been cloned from numerous crop plants using highly conserved DNA sequence motifs. The aims of this research were to (i) isolate genomic DNA clones for RGCs in cultivated sunflower (Helianthus annuus L.) and (ii) m...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g00-110

    authors: Gedil MA,Slabaugh MB,Berry S,Johnson R,Michelmore R,Miller J,Gulya T,Knapp SJ

    更新日期:2001-04-01 00:00:00

  • Chromosome evolution in kangaroos (Marsupialia: Macropodidae): cross species chromosome painting between the tammar wallaby and rock wallaby spp. with the 2n = 22 ancestral macropodid karyotype.

    abstract::Marsupial mammals show extraordinary karyotype stability, with 2n = 14 considered ancestral. However, macropodid marsupials (kangaroos and wallabies) exhibit a considerable variety of karyotypes, with a hypothesised ancestral karyotype of 2n = 22. Speciation and karyotypic diversity in rock wallabies (Petrogale) is ex...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g98-159

    authors: O'Neill RJ,Eldridge MD,Toder R,Ferguson-Smith MA,O'Brien PC,Graves JA

    更新日期:1999-06-01 00:00:00

  • Organization of 5S ribosomal RNA genes in tea (Camellia sinensis).

    abstract::The 5S rRNA genes in the Camellia sinensis (L.) O. Kuntze (tea) genome are arranged as tandem repeat units of 300 and 325 bps. The 2 classes of tandem repeats were discovered by Southern hybridisation of tea genomic DNA with a 5S rRNA gene PCR product. ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-44-1-143

    authors: Singh D,Singh M

    更新日期:2001-02-01 00:00:00

  • Analysis of 106 kb of contiguous DNA sequence from the D genome of wheat reveals high gene density and a complex arrangement of genes related to disease resistance.

    abstract::Vast differences exist in genome sizes of higher plants; however, gene count remains relatively constant among species. Differences observed in DNA content can be attributed to retroelement amplification leading to genome expansion. Cytological and genetic studies have demonstrated that genes are clustered in islands ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g02-049

    authors: Brooks SA,Huang L,Gill BS,Fellers JP

    更新日期:2002-10-01 00:00:00

  • Can butterflies cope with city life? Butterfly diversity in a young megacity in southern China.

    abstract::During 30 years of unprecedented urbanization, plant diversity in Shenzhen, a young megacity in southern China, has increased dramatically. Although strongly associated with plant diversity, butterfly diversity generally declines with urbanization, but this has not been investigated in Shenzhen. Considering the speed ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2015-0192

    authors: Sing KW,Dong H,Wang WZ,Wilson JJ

    更新日期:2016-09-01 00:00:00

  • Development of species-specific primers with potential for amplifying eDNA from imperilled freshwater unionid mussels.

    abstract::Environmental DNA (eDNA) is emerging as a potentially powerful tool for inferring species' presence, and hence occupancy, from DNA that is shed into environmental samples such as water. Although eDNA screening has been used to detect DNA from a variety of taxonomic groups, it has not yet been used to identify DNA from...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2015-0196

    authors: Cho A,Morris T,Wilson C,Freeland J

    更新日期:2016-12-01 00:00:00

  • Biparental inheritance of RAPD markers in males of the pseudo-arrhenotokous mite Typhlodromus pyri.

    abstract::In pseudo-arrhenotokous mites, haploid males develop from fertilized eggs that undergo paternal genome loss (PGL) during early embryogenesis. We present evidence that some of the paternal genome may be retained in males of the predatory mite Typhlodromus pyri Scheuten (Acari: Phytoseiidae). Two reproductively compatib...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g95-110

    authors: Perrot-Minnot MJ,Navajas M

    更新日期:1995-10-01 00:00:00

  • Phylogenomic inferences from reference-mapped and de novo assembled short-read sequence data using RADseq sequencing of California white oaks (Quercus section Quercus).

    abstract::The emergence of next generation sequencing has increased by several orders of magnitude the amount of data available for phylogenetics. Reduced representation approaches, such as restriction-sited associated DNA sequencing (RADseq), have proven useful for phylogenetic studies of non-model species at a wide range of p...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2016-0202

    authors: Fitz-Gibbon S,Hipp AL,Pham KK,Manos PS,Sork VL

    更新日期:2017-09-01 00:00:00

  • Development of a set of near isogenic and backcross recombinant inbred lines containing most of the Lycopersicon hirsutum genome in a L. esculentum genetic background: a tool for gene mapping and gene discovery.

    abstract::A novel population consisted of a set of 99 near isogenic lines (NILs) and backcross recombinant inbred lines (BCRILs) derived from a cross between the cultivated tomato Lycopersicon esculentum cv. E6206 and L. hirsutum accession LA1777 is presented. Most of the lines contain a single defined introgression from L. hir...

    journal_title:Genome

    pub_type: 杂志文章

    doi:

    authors: Monforte AJ,Tanksley SD

    更新日期:2000-10-01 00:00:00

  • Antisense inhibition of a tomato meiotic proteinase suggests functional redundancy of proteinases during microsporogenesis.

    abstract::Anther development in angiosperms culminates in the programmed cell death of specific tissues to facilitate the release of pollen. Despite a wealth of morphological descriptions of this process, there have been few reports on the regulation of dehiscence or the coordination of events between tissues. We have cloned an...

    journal_title:Genome

    pub_type: 杂志文章

    doi:

    authors: Riggs CD,Zeman K,Deguzman R,Rzepczyk A,Taylor AA

    更新日期:2001-08-01 00:00:00

  • The mitochondrial genome structure of the clouded leopard (Neofelis nebulosa).

    abstract::The complete 16 844 bp mitochondrial genome of Neofelis nebulosa has been sequenced and compared with the complete mitochondrial genomes of Felis catus and the Acinonyx jubatus. The base composition of the mitochondrial genome of N. nebulosa is as follows: A, 5343 bp (31.7%); C, 4441 bp (26.4%); G, 2491 bp (14.8%); T,...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g06-143

    authors: Wu X,Zheng T,Jiang Z,Wei L

    更新日期:2007-02-01 00:00:00

  • A cytogenetic analysis of the Simulium ochraceum species complex (Diptera: Simuliidae) in Central America.

    abstract::A cytobiotaxonomic study of the medically important insect vector Simulium ochraceum s.l. revealed two sibling species and one cytotype from various endemic and nonendemic zones of human onchocerciasis in Guatemala and Mexico. Polytene chromosome maps and idiograms as well as notes on the biology of the three taxa des...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g94-006

    authors: Hirai H,Procunier WS,Ochoa JO,Uemoto K

    更新日期:1994-02-01 00:00:00

  • Molecular analysis of evolutionary patterns in U genome wild wheats.

    abstract::The theory of pivotal-differential evolution states that one genome of polyploid wheats remains stable (i.e., pivotal) during evolution, while the other genome or genomes may become modified (i.e., differential). A proposed mechanism for apparent modification of the differential genome is that different polyploid spec...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g95-036

    authors: Chee PW,Lavin M,Talbert LE

    更新日期:1995-04-01 00:00:00

  • Somatic chimerism, genetic inheritance, and mapping of the fleshless berry (flb) mutation in grapevine (Vitis vinifera L.).

    abstract::The fleshless berry (flb) mutation of grapevine (Vitis vinifera L. 'Ugni Blanc') impairs the differentiation and division of inner mesocarp cells responsible for flesh in grapevine berries. In order to study the inheritance of the mutation and to map the flb locus, 5 segregating populations were created. Progeny plant...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g06-034

    authors: Fernandez L,Doligez A,Lopez G,Thomas MR,Bouquet A,Torregrosa L

    更新日期:2006-07-01 00:00:00