Genetic diversity and structure in the northern populations of European hazelnut (Corylus avellana L.).

Abstract:

:European hazelnut (Corylus avellana L.) is a strictly cross-pollinated diploid tree species, which has its northernmost populations in Fennoscandia, and it was one of the first species to recolonize northern Europe after the last ice age. Hazelnut produces edible nuts in Finland but nowadays they are underutilized as food, and currently no breeding programmes exist. In the present study, 300 hazelnut specimens were collected from 20 different locations (= populations) in Finland, and they were genetically analyzed using nine simple sequence repeat (SSR) markers. Most of the genetic diversity existed within populations (83%). According to different genetic analyses (STRUCTURE, principal coordinates analysis, and clustering), a general lack of structure was observed, suggesting extensive gene flow among hazelnuts between 17 investigated populations. However, genetic structuring was clearly observed in three populations: Hakavuori, Mustiala, and Pähkinämäki, which might have become isolated due to geographical barriers that kept them separate, diminishing gene flow from other populations. Studying the diversity of European hazelnut is of great interest for understanding population genetics of a species distributed in its marginal areas in the north, and the results are also valuable for further uses in plant conservation, selection, and possible future breeding actions in Finland.

journal_name

Genome

journal_title

Genome

authors

Tanhuanpää P,Heinonen M,Bitz L,Rokka VM

doi

10.1139/gen-2018-0193

subject

Has Abstract

pub_date

2019-08-01 00:00:00

pages

537-548

issue

8

eissn

0831-2796

issn

1480-3321

journal_volume

62

pub_type

杂志文章

相关文献

GENOME文献大全
  • The mitochondrial genome of the soybean cyst nematode, Heterodera glycines.

    abstract::We sequenced the entire coding region of the mitochondrial genome of Heterodera glycines. The sequence obtained comprised 14.9 kb, with PCR evidence indicating that the entire genome comprised a single, circular molecule of approximately 21-22 kb. The genome is the most T-rich nematode mitochondrial genome reported to...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g11-024

    authors: Gibson T,Farrugia D,Barrett J,Chitwood DJ,Rowe J,Subbotin S,Dowton M

    更新日期:2011-07-01 00:00:00

  • Potential of trispecies bridge crosses and random amplified polymorphic DNA markers for introgression of Medicago daghestanica and M. pironae germplasm into alfalfa (M. sativa).

    abstract::This report describes the production and cytology of the first interspecific hybrids between cultivated alfalfa (Medicago sativa L.) at the diploid level (2n = x = 16) and the diploid (2n = 2x = 16) perennial species M. daghestanica and M. pironae. An ovule-embryo culture technique was required to rescue hybrid embryo...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g93-080

    authors: McCoy TJ,Echt CS

    更新日期:1993-06-01 00:00:00

  • Spectral karyotyping (SKY) of mouse meiotic chromosomes.

    abstract::The spectral karyotyping procedure of in situ hybridization with chromosome-specific probes assigns a unique colour code to each of the 21 mouse mitotic chromosomes. We have adapted this procedure to meiotic prophase chromosomes, and the results show that each of the pachytene or metaphase I bivalents can be identifie...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g01-018

    authors: Heng HH,Liu G,Lu W,Bremer S,Ye CJ,Hughes M,Moens P

    更新日期:2001-04-01 00:00:00

  • Selection constraints determine preference for A/U-ending codons in Taxus contorta.

    abstract::Unequal utilization of synonymous codons is a well-known phenomenon among living organisms. This phenomenon plays a major role in the enhancement of the accuracy and efficiency of translation. Gymnosperms are rarely paid attention in this aspect. Understanding the degree of and determining the forces influencing codon...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2019-0165

    authors: Majeed A,Kaur H,Bhardwaj P

    更新日期:2020-04-01 00:00:00

  • Identification of candidate genes for the seed coat colour change in a Brachypodium distachyon mutant induced by gamma radiation using whole-genome re-sequencing.

    abstract::Brachypodium distachyon has been proposed as a model plant for agriculturally important cereal crops such as wheat and barley. Seed coat colour change from brown-red to yellow was observed in a mutant line (142-3) of B. distachyon, which was induced by chronic gamma radiation. In addition, dwarf phenotypes were observ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2016-0145

    authors: Lee MB,Kim DY,Seo YW

    更新日期:2017-07-01 00:00:00

  • A cytogenetic analysis of the Simulium ochraceum species complex (Diptera: Simuliidae) in Central America.

    abstract::A cytobiotaxonomic study of the medically important insect vector Simulium ochraceum s.l. revealed two sibling species and one cytotype from various endemic and nonendemic zones of human onchocerciasis in Guatemala and Mexico. Polytene chromosome maps and idiograms as well as notes on the biology of the three taxa des...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g94-006

    authors: Hirai H,Procunier WS,Ochoa JO,Uemoto K

    更新日期:1994-02-01 00:00:00

  • A single molecular marker to distinguish between species of Dioscorea.

    abstract::Yams are species of the genus Dioscorea (family Dioscoreaceae), which consists of approximately 630 species. The majority of the world production of yams occurs in Africa with 58.8 million t annually, but they are also produced in the Americas and Asia. The saponins in yams have been reported to possess various proper...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2015-0105

    authors: Techen N,Parveen I,Khan IA

    更新日期:2017-03-01 00:00:00

  • Detection of cytosine methylation and mapping of a gene influencing cytosine methylation in the genome of Citrus.

    abstract::A new method was developed to detect DNA methylation in the Citrus genome using random amplification coupled with restriction enzyme digestion. Genomic DNA from Citrus grandis (L.) Osb., Poncirus trifoliata (L.) Raf., and their F1 hybrid was amplified using 7 individual 10-mer random primers. Prior to amplification th...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g96-032

    authors: Cai Q,Guy CL,Moore GA

    更新日期:1996-04-01 00:00:00

  • Molecular evolution of ribosomal intergenic spacers in Odontophrynus americanus 2n and 4n (Amphibia: Anura).

    abstract::Ribosomal intergenic spacers (IGSs) of Odontophrynus americanus 2n and 4n were cloned, restriction mapped, and partially sequenced. Three distinct regions, namely alpha, beta, and delta, were identified in the IGSs. The alpha and beta regions flanked the 28S and 18S rRNA genes, respectively, conserving an identical re...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g01-134

    authors: Alvares LE,Polanco C,Brison O,Coutinho LL,Ruiz IR

    更新日期:2002-02-01 00:00:00

  • Relationship between bruchid resistance and seed mass in mungbean based on QTL analysis.

    abstract::Bruchids (Coleoptera: Bruchidae) can cause serious damage to mungbean and several other leguminous crops and there is a strong association between small seed size and bruchid resistance. In investigating the feasibility of breeding large-seeded cultivars with high levels of bruchid resistance, we studied the relations...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/G09-031

    authors: Mei L,Cheng XZ,Wang SH,Wang LX,Liu CY,Sun L,Xu N,Humphry ME,Lambrides CJ,Li HB,Liu CJ

    更新日期:2009-07-01 00:00:00

  • Development of PCR-based SCAR and CAPS markers linked to beta-glucan and protein content QTL regions in oat.

    abstract::A key breeding objective in oat (Avena sativa L.) is cultivars with high and low beta-glucan content. In a targeted strategy to develop PCR-based markers linked to published beta-glucan content quantitative trait loci (QTLs) regions, 15 random amplified polymorphic DNA (RAPD) fragments were cloned and their sequences ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/G08-026

    authors: Orr W,Molnar SJ

    更新日期:2008-06-01 00:00:00

  • The genetics of Cannabis - genomic variations of key synthases and their effect on cannabinoids content.

    abstract::Despite being a controversial crop, Cannabis sativa L. has a long history of cultivation throughout the world. Following recent legalisation in Canada, it is emerging as an important plant for both medicinal and recreational purposes. Recent progress in genome sequencing of both cannabis and hemp varieties allows for ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2020-0087

    authors: Singh A,Bilichak A,Kovalchuk I

    更新日期:2020-11-13 00:00:00

  • Somatic chimerism, genetic inheritance, and mapping of the fleshless berry (flb) mutation in grapevine (Vitis vinifera L.).

    abstract::The fleshless berry (flb) mutation of grapevine (Vitis vinifera L. 'Ugni Blanc') impairs the differentiation and division of inner mesocarp cells responsible for flesh in grapevine berries. In order to study the inheritance of the mutation and to map the flb locus, 5 segregating populations were created. Progeny plant...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g06-034

    authors: Fernandez L,Doligez A,Lopez G,Thomas MR,Bouquet A,Torregrosa L

    更新日期:2006-07-01 00:00:00

  • Distribution of highly repeated DNA sequences in species of the genus Lens Miller.

    abstract::Multiple-target fluorescence in situ hybridization (FISH) was applied on mitotic chromosomes of seven Lens taxa using two highly repetitive sequences (pLc30 and pLc7) isolated from the cultivated lentil and the multigene families for the 18S-5.8S-25S (pTa71) and 5S rRNA (pTa794) from wheat simultaneously as probes. Th...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g03-077

    authors: Galasso I

    更新日期:2003-12-01 00:00:00

  • Molecular cloning, heterologous expression, and phylogenetic analysis of a novel y-type HMW glutenin subunit gene from the G genome of Triticum timopheevi.

    abstract::A novel y-type high molecular weight (HMW) glutenin subunit gene from the G genome of Triticum timopheevi (2n=4x=28, AAGG) was isolated and characterized. Genomic DNA from accession CWI17006 was amplified and a 2200 bp fragment was obtained. Sequence analysis revealed a complete open reading frame including N- and C-t...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/G07-089

    authors: Li X,Zhang Y,Gao L,Wang A,Ji K,He Z,Appels R,Ma W,Yan Y

    更新日期:2007-12-01 00:00:00

  • Prediction of novel isoforms of the mouse Mpv17l protein.

    abstract::The Mpv17l protein has two isoforms, M-LPL and M-LPS, which both regulate the production of reactive oxygen species (ROS) and protect against mitochondrial oxidative stress and apoptosis. M-LPL is ubiquitously expressed, while M-LPS is expressed mostly in the kidney of aged animals. We identified a variety of transcri...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g09-061

    authors: Magoulas C,Jasim A,Lopez de Heredia L

    更新日期:2009-11-01 00:00:00

  • Large genomes among caridean shrimp.

    abstract::Recent genome size estimates for Arctic amphipods have revealed the largest genomes known in the Crustacea. Here we provide additional data for 7 species of caridean shrimp collected from the Canadian Arctic and the Gulf of St. Lawrence. Genome sizes were estimated by flow cytometry and haploid C-values ranged from 8....

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g07-108

    authors: Rees DJ,Belzile C,Glémet H,Dufresne F

    更新日期:2008-02-01 00:00:00

  • Evaluating five different loci (rbcL, rpoB, rpoC1, matK, and ITS) for DNA barcoding of Indian orchids.

    abstract::Orchidaceae, one of the largest families of angiosperms, is represented in India by 1600 species distributed in diverse habitats. Orchids are in high demand owing to their beautiful flowers and therapeutic properties. Overexploitation and habitat destruction have made many orchid species endangered. In the absence of ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2016-0215

    authors: Parveen I,Singh HK,Malik S,Raghuvanshi S,Babbar SB

    更新日期:2017-08-01 00:00:00

  • Mapping the anther culture response genes in maize (Zea mays L.).

    abstract::In order to map the genes conditioning the induction of embryos during our anther culture process, we evaluated F2 plants from three different crosses for their anther culture ability and also performed RFLP analysis on these plants. The results showed that six chromosomal regions appear to be associated with the abil...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g95-127

    authors: Beaumont VH,Rocheford TR,Widholm JM

    更新日期:1995-10-01 00:00:00

  • Assignment of a gene that determines erythrocytic guanosine-5'-triphosphate concentration (Gtpc) to mouse chromosome 9.

    abstract::Nine inbred mouse strains surveyed for erythrocytic guanosine-5'-triphosphate (GTP) concentration were found to segregate into two discrete groups. Strains having low GTP levels between 1.4 and 3.4 nmol/10(9) cells were C3H/HeJ, C3H/HeHa, A/J, and WB/ReJ. Strains having high GTP levels between 11.0 and 14.8 nmol/10(9)...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g94-056

    authors: Jenuth JP,Fung E,Snyder FF

    更新日期:1994-06-01 00:00:00

  • Analyses of Thinopyrum bessarabicum, T. elongatum, and T. junceum chromosomes using EST-SSR markers.

    abstract::Wild Thinopyrum grasses are important gene pools for forage and cereal crops. Knowledge of their chromosome organizations is pivotal for efficient utilization of this important gene pool in germplasm enhancement programs. Expressed sequence tags derived simple sequence repeat (EST-SSR) markers for Thinopyrum bessarabi...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/G10-088

    authors: Wang RR,Larson SR,Jensen KB

    更新日期:2010-12-01 00:00:00

  • Chromosome elimination in germ line-soma differentiation of Acricotopus lucidus (Diptera, Chironomidae).

    abstract::During germ line-soma differentiation in early syncytial embryonic development of the chironomid Acricotopus lucidus, a complement of supernumerary chromosomes, the so-called germ line limited chromosomes (Ks), is excluded from the future somatic nuclei in the course of elimination mitoses. The Ks lag behind in the eq...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g05-103

    authors: Staiber W

    更新日期:2006-03-01 00:00:00

  • BKm minisatellite sequences are not sex associated but reveal DNA fingerprint polymorphisms in rainbow trout.

    abstract::GATA-GACA repetitive sequences first isolated from a female snake (termed BKm sequences) and associated with sex chromosomes in some species were hybridized to DNA from rainbow trout (Salmo gairdneri). Genomic DNA was studied from three groups of rainbow trout: (i) randomly selected males and females from an outbred g...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g89-523

    authors: Lloyd MA,Fields MJ,Thorgaard GH

    更新日期:1989-10-01 00:00:00

  • The mitochondrial genome structure of the clouded leopard (Neofelis nebulosa).

    abstract::The complete 16 844 bp mitochondrial genome of Neofelis nebulosa has been sequenced and compared with the complete mitochondrial genomes of Felis catus and the Acinonyx jubatus. The base composition of the mitochondrial genome of N. nebulosa is as follows: A, 5343 bp (31.7%); C, 4441 bp (26.4%); G, 2491 bp (14.8%); T,...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g06-143

    authors: Wu X,Zheng T,Jiang Z,Wei L

    更新日期:2007-02-01 00:00:00

  • Physical characterization of the homoeologous group 5 chromosomes of wheat in terms of rice linkage blocks, and physical mapping of some important genes.

    abstract::The wheat homoeologous Group 5 chromosomes were characterized physically in terms of rice linkage blocks using a deletion mapping approach. All three chromosomes, 5A, 5B, and 5D, were shown to have a similar structure, apart from the 4A-5A translocation on the distal end of chromosome arm 5AL. The physical mapping of ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:

    authors: Sarma RN,Fish L,Gill BS,Snape JW

    更新日期:2000-02-01 00:00:00

  • Molecular cytogenetic analysis of wheat - Elymus repens introgression lines with resistance to Fusarium head blight.

    abstract::Elymus repens (L.) Gould (2n = 6x = 42, StStStStHH) is a hexaploid perennial wheatgrass species from the tribe Triticeae, distantly related to bread wheat Triticum aestivum L. (2n = 6x = 42, AABBDD). As a potential source of resistance to Fusarium head blight (FHB), E. repens was crossed to common wheat to transfer re...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2012-0130

    authors: Zeng J,Cao W,Hucl P,Yang Y,Xue A,Chi D,Fedak G

    更新日期:2013-01-01 00:00:00

  • Standard karyotype of Triticum longissimum and its cytogenetic relationship with T. aestivum.

    abstract::C-banding polymorphism was analyzed in 17 accessions of Triticum longissimum from Israel and Jordan, and a generalized idiogram of this species was established. C-banding analysis was further used to identify two sets of disomic T. aestivum - T. longissimum chromosome addition lines and 13 ditelosomic addition lines a...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g93-098

    authors: Friebe B,Tuleen N,Jiang J,Gill BS

    更新日期:1993-08-01 00:00:00

  • A method for assaying the sensitivity of Drosophila replication checkpoint mutants to anti-cancer and DNA-damaging drugs.

    abstract::In multi-cellular organisms, failure to properly regulate cell-cycle progression can result in inappropriate cell death or uncontrolled cell division leading to tumor formation. To guard against such events, conserved regulatory mechanisms called "checkpoints" block progression into mitosis in response to DNA damage a...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g02-051

    authors: Radcliffe CM,Silva EA,Campbell SD

    更新日期:2002-10-01 00:00:00

  • Genetic determinism of δ3-carene in maritime pine using RAPD markers.

    abstract::An F2 progeny of maritime pine (Pinus pinaster Aïton) was used to investigate the mode of inheritance of δ3-carene using a quantitative and a qualitative approach. A previously reported genetic map constructed with random amplified polymorphic DNA (RAPD) markers made it possible to locate one major quantitative ...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/g96-141

    authors: Plomion C,Yani A,Marpeau A

    更新日期:1996-12-01 00:00:00

  • Cytogenetics and characterization of microsatellite loci for a South American pioneer tree species, Croton floribundus.

    abstract::Despite the recent advances in plant population genetic studies, the lack of information regarding pedigree, ploidy level, or mode of inheritance for many polyploids can compromise the analysis of the molecular data produced. The aim of this study was to examine both microsatellite and cytogenetic characteristics of t...

    journal_title:Genome

    pub_type: 杂志文章

    doi:10.1139/gen-2013-0159

    authors: Silvestrini M,Pinto-Maglio CA,Zucchi MI,dos Santos FA

    更新日期:2013-12-01 00:00:00