Polymerase chain displacement reaction.

Abstract:

:Quantitative PCR assays are now the standard method for viral diagnostics. These assays must be specific, as well as sensitive, to detect the potentially low starting copy number of viral genomic material. We describe a new technique, polymerase chain displacement reaction (PCDR), which uses multiple nested primers in a rapid, capped, one-tube reaction that increases the sensitivity of normal quantitative PCR (qPCR) assays. Sensitivity was increased by approximately 10-fold in a proof-of-principle test on dengue virus sequence. In PCDR, when extension occurs from the outer primer, it displaces the extension strand produced from the inner primer by utilizing a polymerase that has strand displacement activity. This allows a greater than 2-fold increase of amplification product for each amplification cycle and therefore increased sensitivity and speed over conventional PCR. Increased sensitivity in PCDR would be useful in nucleic acid detection for viral diagnostics.

journal_name

Biotechniques

journal_title

BioTechniques

authors

Harris CL,Sanchez-Vargas IJ,Olson KE,Alphey L,Fu G

doi

10.2144/000113951

subject

Has Abstract

pub_date

2013-02-01 00:00:00

pages

93-7

issue

2

eissn

0736-6205

issn

1940-9818

pii

000113951

journal_volume

54

pub_type

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