MRSA Isolates from United States Hospitals Carry dfrG and dfrK Resistance Genes and Succumb to Propargyl-Linked Antifolates.

Abstract:

:Antibiotic resistance is a rapidly evolving health concern that requires a sustained effort to understand mechanisms of resistance and to develop new agents that overcome those mechanisms. The dihydrofolate reductase (DHFR) inhibitor, trimethoprim (TMP), remains one of the most important orally administered antibiotics. However, resistance through chromosomal mutations and mobile, plasmid-encoded insensitive DHFRs threatens the continued use of this agent. We are pursuing the development of new propargyl-linked antifolate (PLA) DHFR inhibitors designed to evade these mechanisms. While analyzing contemporary TMP-resistant clinical isolates of methicillin-resistant and sensitive Staphylococcus aureus, we discovered two mobile resistance elements, dfrG and dfrK. This is the first identification of these resistance mechanisms in the United States. These resistant organisms were isolated from a variety of infection sites, show clonal diversity, and each contain distinct resistance genotypes for common antibiotics. Several PLAs showed significant activity against these resistant strains by direct inhibition of the TMP resistance elements.

journal_name

Cell Chem Biol

journal_title

Cell chemical biology

authors

Reeve SM,Scocchera EW,G-Dayanadan N,Keshipeddy S,Krucinska J,Hajian B,Ferreira J,Nailor M,Aeschlimann J,Wright DL,Anderson AC

doi

10.1016/j.chembiol.2016.11.007

subject

Has Abstract

pub_date

2016-12-22 00:00:00

pages

1458-1467

issue

12

eissn

2451-9456

issn

2451-9448

pii

S2451-9456(16)30430-5

journal_volume

23

pub_type

杂志文章
  • Discovery of an Unnatural DNA Modification Derived from a Natural Secondary Metabolite.

    abstract::Despite widespread interest for understanding how modified bases have evolved their contemporary functions, limited experimental evidence exists for measuring how close an organism is to accidentally creating a new, modified base within the framework of its existing genome. Here, we describe the biochemical and struct...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2020.09.006

    authors: Wang T,Kohli RM

    更新日期:2021-01-21 00:00:00

  • Systematic Identification of Pharmacological Targets from Small-Molecule Phenotypic Screens.

    abstract::Phenotypic drug discovery offers some advantages over target-based methods, mainly because it allows drug leads to be tested in systems that more closely model distinct disease states. However, a potential disadvantage is the difficulty of linking the observed phenotype to a specific cellular target. To address this p...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2016.08.011

    authors: Liu X,Baarsma HA,Thiam CH,Montrone C,Brauner B,Fobo G,Heier JS,Duscha S,Königshoff M,Angeli V,Ruepp A,Campillos M

    更新日期:2016-10-20 00:00:00

  • Inhibition of K-RAS4B by a Unique Mechanism of Action: Stabilizing Membrane-Dependent Occlusion of the Effector-Binding Site.

    abstract::KRAS is frequently mutated in several of the most lethal types of cancer; however, the KRAS protein has proven a challenging drug target. K-RAS4B must be localized to the plasma membrane by prenylation to activate oncogenic signaling, thus we endeavored to target the protein-membrane interface with small-molecule comp...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2018.07.009

    authors: Fang Z,Marshall CB,Nishikawa T,Gossert AD,Jansen JM,Jahnke W,Ikura M

    更新日期:2018-11-15 00:00:00

  • Site-Specific Photo-Crosslinking Proteomics Reveal Regulation of IFITM3 Trafficking and Turnover by VCP/p97 ATPase.

    abstract::Interferon-induced transmembrane protein 3 (IFITM3) is a key interferon effector that broadly prevents infection by diverse viruses. However, the cellular factors that control IFITM3 homeostasis and antiviral activity have not been fully elucidated. Using site-specific photo-crosslinking and quantitative proteomic ana...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2020.03.004

    authors: Wu X,Spence JS,Das T,Yuan X,Chen C,Zhang Y,Li Y,Sun Y,Chandran K,Hang HC,Peng T

    更新日期:2020-05-21 00:00:00

  • An Isoform-Selective Modulator of Cryptochrome 1 Regulates Circadian Rhythms in Mammals.

    abstract::Cryptochrome 1 (CRY1) and CRY2 are core regulators of the circadian clock, and the development of isoform-selective modulators is important for the elucidation of their redundant and distinct functions. Here, we report the identification and functional characterization of a small-molecule modulator of the mammalian ci...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2020.05.008

    authors: Miller S,Aikawa Y,Sugiyama A,Nagai Y,Hara A,Oshima T,Amaike K,Kay SA,Itami K,Hirota T

    更新日期:2020-09-17 00:00:00

  • A Photo-clickable ATP-Mimetic Reveals Nucleotide Interactors in the Membrane Proteome.

    abstract::ATP is an important energy metabolite and allosteric signal in health and disease. ATP-interacting proteins, such as P2 receptors, control inflammation, cell death, migration, and wound healing. However, identification of allosteric ATP sites remains challenging, and our current inventory of ATP-controlled pathways is...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2020.05.010

    authors: Jelcic M,Wang K,Hui KL,Cai XC,Enyedi B,Luo M,Niethammer P

    更新日期:2020-08-20 00:00:00

  • How to Increase Brightness of Near-Infrared Fluorescent Proteins in Mammalian Cells.

    abstract::Numerous near-infrared (NIR) fluorescent proteins (FPs) were recently engineered from bacterial photoreceptors but lack of their systematic comparison makes researcher's choice rather difficult. Here we evaluated side-by-side several modern NIR FPs, such as blue-shifted smURFP and miRFP670, and red-shifted mIFP and mi...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2017.05.018

    authors: Shemetov AA,Oliinyk OS,Verkhusha VV

    更新日期:2017-06-22 00:00:00

  • Small-Molecule Allosteric Triggers of Clostridium difficile Toxin B Auto-proteolysis as a Therapeutic Strategy.

    abstract::Clostridium difficile causes increasing numbers of life-threatening intestinal infections. Symptoms associated with C. difficile infection (CDI) are mediated by secreted protein toxins, whose virulence is modulated by intracellular auto-proteolysis following allosteric activation of their protease domains by inositol ...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2018.10.002

    authors: Ivarsson ME,Durantie E,Huberli C,Huwiler S,Hegde C,Friedman J,Altamura F,Lu J,Verdu EF,Bercik P,Logan SM,Chen W,Leroux JC,Castagner B

    更新日期:2019-01-17 00:00:00

  • A Clickable APEX Probe for Proximity-Dependent Proteomic Profiling in Yeast.

    abstract::The engineered ascorbate peroxidase (APEX) is a powerful tool for the proximity-dependent labeling of proteins and RNAs in live cells. Although widely use in mammalian cells, APEX applications in microorganisms have been hampered by the poor labeling efficiency of its biotin-phenol (BP) substrate. In this study, we so...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2020.05.006

    authors: Li Y,Tian C,Liu K,Zhou Y,Yang J,Zou P

    更新日期:2020-07-16 00:00:00

  • Lithocholic Acid Hydroxyamide Destabilizes Cyclin D1 and Induces G0/G1 Arrest by Inhibiting Deubiquitinase USP2a.

    abstract::USP2a is a deubiquitinase responsible for stabilization of cyclin D1, a crucial regulator of cell-cycle progression and a proto-oncoprotein overexpressed in numerous cancer types. Here we report that lithocholic acid (LCA) derivatives are inhibitors of USP proteins, including USP2a. The most potent LCA derivative, LCA...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2017.03.002

    authors: Magiera K,Tomala M,Kubica K,De Cesare V,Trost M,Zieba BJ,Kachamakova-Trojanowska N,Les M,Dubin G,Holak TA,Skalniak L

    更新日期:2017-04-20 00:00:00

  • A SUMO1-derived peptide targeting SUMO-interacting motif inhibits α-synuclein aggregation.

    abstract::The accumulation of α-synuclein amyloid fibrils in the brain is linked to Parkinson's disease and other synucleinopathies. The intermediate species in the early aggregation phase of α-synuclein are involved in the emergence of amyloid toxicity and considered to be the most neurotoxic. The N-terminal region flanking th...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2020.12.010

    authors: Liang Z,Chan HYE,Lee MM,Chan MK

    更新日期:2021-01-06 00:00:00

  • Posttranslational Peptide-Modification Enzymes in Action: Key Roles for Leaders and Glutamate.

    abstract::In this issue of Cell Chemical Biology, Ortega et al. (2016) determine the structure of another lantibiotic dehydratase with a tRNA(Glu)-dependent mechanism of modification. Moreover, they identify a common recognition motif involved in leader peptide binding in a number of different peptide-modification enzymes. Thes...

    journal_title:Cell chemical biology

    pub_type: 评论,杂志文章

    doi:10.1016/j.chembiol.2016.03.001

    authors: Montalbán-López M,Kuipers OP

    更新日期:2016-03-17 00:00:00

  • Fighting Kinase Drug Resistance with Caspase Activators.

    abstract::Kinase inhibitors are effective cancer therapies. Unfortunately, drug resistance emerges in response to kinase inhibition leading to loss of drug efficacy. In this issue of Cell Chemical Biology, Peh et al. (2018) demonstrate that caspase activators effectively delay onset of resistance to kinase inhibitors and are ex...

    journal_title:Cell chemical biology

    pub_type: 评论,杂志文章

    doi:10.1016/j.chembiol.2018.08.001

    authors: Hardy JA

    更新日期:2018-08-16 00:00:00

  • Lanthanide-Based Optical Probes of Biological Systems.

    abstract::The unique photophysical properties of lanthanides, such as europium, terbium, and ytterbium, make them versatile molecular probes of biological systems. In particular, their long-lived photoluminescence, narrow bandwidth emissions, and large Stokes shifts enable experiments that are infeasible with organic fluorophor...

    journal_title:Cell chemical biology

    pub_type: 杂志文章,评审

    doi:10.1016/j.chembiol.2020.07.009

    authors: Cho U,Chen JK

    更新日期:2020-08-20 00:00:00

  • BLISS: A Bioorthogonal Dual-Labeling Strategy to Unravel Lignification Dynamics in Plants.

    abstract::A better in vivo understanding of lignin formation within plant cell walls will contribute to improving the valorization of plant-derived biomass. Although bioorthogonal chemistry provides a promising platform to study the lignification process, methodologies that simultaneously detect multiple chemical reporters in l...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2017.02.009

    authors: Lion C,Simon C,Huss B,Blervacq AS,Tirot L,Toybou D,Spriet C,Slomianny C,Guerardel Y,Hawkins S,Biot C

    更新日期:2017-03-16 00:00:00

  • A Robust, GFP-Orthogonal Photoswitchable Inhibitor Scaffold Extends Optical Control over the Microtubule Cytoskeleton.

    abstract::Optically controlled chemical reagents, termed "photopharmaceuticals," are powerful tools for precise spatiotemporal control of proteins particularly when genetic methods, such as knockouts or optogenetics are not viable options. However, current photopharmaceutical scaffolds, such as azobenzenes are intolerant of GFP...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2020.11.007

    authors: Gao L,Meiring JCM,Kraus Y,Wranik M,Weinert T,Pritzl SD,Bingham R,Ntouliou E,Jansen KI,Olieric N,Standfuss J,Kapitein LC,Lohmüller T,Ahlfeld J,Akhmanova A,Steinmetz MO,Thorn-Seshold O

    更新日期:2020-11-27 00:00:00

  • GNF-2 Inhibits Dengue Virus by Targeting Abl Kinases and the Viral E Protein.

    abstract::Dengue virus infects more than 300 million people annually, yet there is no widely protective vaccine or drugs against the virus. Efforts to develop antivirals against classical targets such as the viral protease and polymerase have not yielded drugs that have advanced to the clinic. Here, we show that the allosteric ...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2016.03.010

    authors: Clark MJ,Miduturu C,Schmidt AG,Zhu X,Pitts JD,Wang J,Potisopon S,Zhang J,Wojciechowski A,Hann Chu JJ,Gray NS,Yang PL

    更新日期:2016-04-21 00:00:00

  • Just a Spoonful of Sugar, HTLV-1 Style.

    abstract::Host cell metabolism regulates viral infection. In this issue of Cell Chemical Biology, Kulkarni et al. (2017) reveal the importance of oxygen concentrations and glycolysis in the reactivation of human T cell leukemia virus (HTLV-1). Identifying the host metabolic networks that regulate infection will foster our under...

    journal_title:Cell chemical biology

    pub_type: 评论,杂志文章

    doi:10.1016/j.chembiol.2017.10.014

    authors: Taylor N

    更新日期:2017-11-16 00:00:00

  • Precision Retargeting: A Selective Covalent Inhibitor Illuminates CDK7 Biology.

    abstract::In this issue of Cell Chemical Biology, Olson et al. (2019) develop the first selective CDK7 irreversible inhibitor. Elegant cell-based studies using a CDK7 mutant that is not covalently engaged by the probe helped decipher the effects of inhibiting the kinase on the cell cycle and gene transcription. ...

    journal_title:Cell chemical biology

    pub_type: 评论,杂志文章

    doi:10.1016/j.chembiol.2019.05.012

    authors: Jones LH

    更新日期:2019-06-20 00:00:00

  • Global Cysteine-Reactivity Profiling during Impaired Insulin/IGF-1 Signaling in C. elegans Identifies Uncharacterized Mediators of Longevity.

    abstract::In the nematode Caenorhabditis elegans, inactivating mutations in the insulin/IGF-1 receptor, DAF-2, result in a 2-fold increase in lifespan mediated by DAF-16, a FOXO-family transcription factor. Downstream protein activities that directly regulate longevity during impaired insulin/IGF-1 signaling (IIS) are poorly ch...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2016.06.015

    authors: Martell J,Seo Y,Bak DW,Kingsley SF,Tissenbaum HA,Weerapana E

    更新日期:2016-08-18 00:00:00

  • A Ratiometric Sensor for Imaging Insulin Secretion in Single β Cells.

    abstract::Despite the urgent need for assays to visualize insulin secretion there is to date no reliable method available for measuring insulin release from single cells. To address this need, we developed a genetically encoded reporter termed RINS1 based on proinsulin superfolder GFP (sfGFP) and mCherry fusions for monitoring ...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2017.03.001

    authors: Schifferer M,Yushchenko DA,Stein F,Bolbat A,Schultz C

    更新日期:2017-04-20 00:00:00

  • The Convergence of Stem Cell Technologies and Phenotypic Drug Discovery.

    abstract::Recent advances in induced pluripotent stem cell technologies and phenotypic screening shape the future of bioactive small-molecule discovery. In this review we analyze the impact of small-molecule phenotypic screens on drug discovery as well as on the investigation of human development and disease biology. We further...

    journal_title:Cell chemical biology

    pub_type: 杂志文章,评审

    doi:10.1016/j.chembiol.2019.05.007

    authors: Friese A,Ursu A,Hochheimer A,Schöler HR,Waldmann H,Bruder JM

    更新日期:2019-08-15 00:00:00

  • GFP-Aequorin Protein Sensor for Ex Vivo and In Vivo Imaging of Ca(2+) Dynamics in High-Ca(2+) Organelles.

    abstract::Proper functioning of organelles such as the ER or the Golgi apparatus requires luminal accumulation of Ca(2+) at high concentrations. Here we describe a ratiometric low-affinity Ca(2+) sensor of the GFP-aequorin protein (GAP) family optimized for measurements in high-Ca(2+) concentration environments. Transgenic anim...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2016.05.010

    authors: Navas-Navarro P,Rojo-Ruiz J,Rodriguez-Prados M,Ganfornina MD,Looger LL,Alonso MT,García-Sancho J

    更新日期:2016-06-23 00:00:00

  • Pathogen Interference: Targeting Virulence Factors to Tackle Intracellular Microbes.

    abstract::Infections with Salmonella enterica pose a challenge for antibiotic treatment. In this issue of Cell Chemical Biology, Tsai et al. use a chemical genomics approach to identify dephostatin as an inhibitor of intracellular Salmonella virulence in vitro and in vivo by targeting the two-component systems SsrA-SsrB and Pmr...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2020.06.017

    authors: Lee MH,Nuccio SP,Raffatellu M

    更新日期:2020-07-16 00:00:00

  • Prevention of Serpin Misfolding by RNA Aptamers.

    abstract::Owing to their structural flexibility, most serpins inhibit the cognate proteases in a fast and specific manner and also are susceptible to pathogenic misfolding. In this issue of Cell Chemical Biology, Madsen et al. (2016) report on the selection and characterization of an RNA aptamer that stabilizes α1-antichymotryp...

    journal_title:Cell chemical biology

    pub_type: 评论,杂志文章

    doi:10.1016/j.chembiol.2016.06.002

    authors: Zhou X,Declerck PJ

    更新日期:2016-06-23 00:00:00

  • Small-Molecule Targets in Immuno-Oncology.

    abstract::Advances in understanding the role and molecular mechanisms underlying immune surveillance and control of (pre)malignancies is revolutionizing clinical practice in the treatment of cancer. Presently, multiple biologic drugs targeting the immune checkpoint proteins PD(L)1 or CTLA4 have been approved and/or are in advan...

    journal_title:Cell chemical biology

    pub_type: 杂志文章,评审

    doi:10.1016/j.chembiol.2017.08.019

    authors: Dhanak D,Edwards JP,Nguyen A,Tummino PJ

    更新日期:2017-09-21 00:00:00

  • A Bright Future for Precision Medicine: Advances in Fluorescent Chemical Probe Design and Their Clinical Application.

    abstract::The Precision Medicine Initiative aims to use advances in basic and clinical research to develop therapeutics that selectively target and kill cancer cells. Under the same doctrine of precision medicine, there is an equally important need to visualize these diseased cells to enable diagnosis, facilitate surgical resec...

    journal_title:Cell chemical biology

    pub_type: 杂志文章,评审

    doi:10.1016/j.chembiol.2015.12.003

    authors: Garland M,Yim JJ,Bogyo M

    更新日期:2016-01-21 00:00:00

  • USP7-Specific Inhibitors Target and Modify the Enzyme's Active Site via Distinct Chemical Mechanisms.

    abstract::USP7 is a deubiquitinating enzyme that plays a pivotal role in multiple oncogenic pathways and therefore is a desirable target for new anti-cancer therapies. However, the lack of structural information about the USP7-inhibitor interactions has been a critical gap in the development of potent inhibitors. USP7 is unique...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2017.09.004

    authors: Pozhidaeva A,Valles G,Wang F,Wu J,Sterner DE,Nguyen P,Weinstock J,Kumar KGS,Kanyo J,Wright D,Bezsonova I

    更新日期:2017-12-21 00:00:00

  • Chemoproteomic Profiling of a Pharmacophore-Focused Chemical Library.

    abstract::Pharmacophore-focused chemical libraries are continuously being created in drug discovery programs, yet screening assays to maximize the usage of such libraries are not fully explored. Here, we report a chemical proteomics approach to reutilizing a focused chemical library of 1,800 indole-containing molecules for disc...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2020.04.007

    authors: Punzalan LL,Jiang L,Mao D,Mahapatra AD,Sato S,Takemoto Y,Tsujimura M,Kusamori K,Nishikawa M,Zhou L,Uesugi M

    更新日期:2020-06-18 00:00:00

  • Detection of Low-Abundance Metabolites in Live Cells Using an RNA Integrator.

    abstract::Genetically encoded biosensors are useful tools for detecting the presence and levels of diverse biomolecules in living cells. However, low-abundance targets are difficult to detect because they are often unable to bind and activate enough biosensors to detect using standard microscopic imaging approaches. Here we des...

    journal_title:Cell chemical biology

    pub_type: 杂志文章

    doi:10.1016/j.chembiol.2019.01.005

    authors: You M,Litke JL,Wu R,Jaffrey SR

    更新日期:2019-04-18 00:00:00