Intrinsically disordered proteins in the formation of functional amyloids from bacteria to humans.

Abstract:

:Amyloids are nanoscopic ordered self-assemblies of misfolded proteins that are formed via aggregation of partially unfolded or intrinsically disordered proteins (IDPs) and are commonly linked to devastating human diseases. An enlarging body of recent research has demonstrated that certain amyloids can be beneficial and participate in a wide range of physiological functions from bacteria to humans. These amyloids are termed as functional amyloids. Like disease-associated amyloids, a vast majority of functional amyloids are derived from a range of IDPs or hybrid proteins containing ordered domains and intrinsically disordered regions (IDRs). In this chapter, we describe an account of recent studies on the aggregation behavior of IDPs resulting in the formation of functional amyloids in a diverse range of organisms from bacteria to human. We also discuss the strategies that are used by these organisms to regulate the spatiotemporal amyloid assembly in their physiological functions.

authors

Avni A,Swasthi HM,Majumdar A,Mukhopadhyay S

doi

10.1016/bs.pmbts.2019.05.005

subject

Has Abstract

pub_date

2019-01-01 00:00:00

pages

109-143

eissn

1877-1173

issn

1878-0814

pii

S1877-1173(19)30083-3

journal_volume

166

pub_type

杂志文章,评审
  • Acquired cerebral amyloid angiopathy: An emerging concept.

    abstract::Cerebral amyloid angiopathy (CAA) is commonly found in older people and in patients with Alzheimer's disease (AD) accompanying cerebrovascular disorders and dementia. Early-onset CAA cases generally have been found only in rare genetic forms of CAA. Interestingly, however, CAA-related hemorrhages have been recently re...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2019.05.012

    authors: Yamada M,Hamaguchi T,Sakai K

    更新日期:2019-01-01 00:00:00

  • AD molecular: Imaging tau aggregates with positron emissions tomography.

    abstract::Pathologic aggregates of tau protein are observed in several neurodegenerative diseases and are used to diagnose and stage disease postmortem. Recent advances in positron emission tomography radioligands allow for the detection of aggregated tau proteins in living persons. This chapter describes the development and ch...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2019.07.007

    authors: Betthauser TJ

    更新日期:2019-01-01 00:00:00

  • The circadian clock in cancer development and therapy.

    abstract::Most aspects of mammalian function display circadian rhythms driven by an endogenous clock. The circadian clock is operated by genes and comprises a central clock in the brain that responds to environmental cues and controls subordinate clocks in peripheral tissues via circadian output pathways. The central and periph...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-396971-2.00009-9

    authors: Fu L,Kettner NM

    更新日期:2013-01-01 00:00:00

  • Viral capsids as self-assembling templates for new materials.

    abstract::The self-assembling protein shells of viruses have provided convenient scaffolds for the construction of many new materials with well-defined nanoscale architectures. In some cases, the native amino acid functional groups have served as nucleation sites for the deposition of metals and semiconductors, leading to organ...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-415906-8.00002-9

    authors: Dedeo MT,Finley DT,Francis MB

    更新日期:2011-01-01 00:00:00

  • Heparan sulfate proteoglycans in amyloidosis.

    abstract::Amyloidosis is a generic term for a group of diseases characterized by deposits in different organ systems of insoluble materials composed mainly of distinct fibrillar proteins named amyloid. Besides amyloid, heparan sulfate proteoglycan (HSPG), is commonly found in most amyloid deposits, suggesting that HS/HSPG may b...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/S1877-1173(10)93013-5

    authors: Zhang X,Li JP

    更新日期:2010-01-01 00:00:00

  • Corneal Dystrophies: Overview and Summary.

    abstract::In this chapter, I shall discuss the genetics, mode of inheritance and molecular origin of several corneal dystrophies. ...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2015.04.004

    authors: Schorderet D

    更新日期:2015-01-01 00:00:00

  • Serum AFP levels in patients suffering from 47 different types of cancers and noncancer diseases.

    abstract::Alpha-fetoprotein (AFP) is a glycoprotein and belongs to the gene family of serum albumins. The serum AFP levels were found to be elevated in the sera of liver cancer patients in 1964 and were subsequently developed and used as a liver cancer biomarker. However, elevated serum AFP levels have been observed in patients...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章

    doi:10.1016/bs.pmbts.2019.01.001

    authors: He Y,Lu H,Zhang L

    更新日期:2019-01-01 00:00:00

  • Autophagy in chronic lung disease.

    abstract::The development of chronic lung disease occurs as a consequence of multiple cellular events that involve an initial insult which often leads to the development of chronic inflammation, and the dysregulation of cellular proliferation and cell death mechanisms. Multiple cell types in the lung are key to the respiratory ...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章

    doi:10.1016/bs.pmbts.2020.02.001

    authors: Racanelli AC,Choi AMK,Choi ME

    更新日期:2020-01-01 00:00:00

  • Molecular Mechanisms of Cannabis Signaling in the Brain.

    abstract::Cannabis has been cultivated and used by humans for thousands of years. Research for decades was focused on understanding the mechanisms of an illegal/addictive drug. This led to the discovery of the vast endocannabinoid system. Research has now shifted to understanding fundamental biological questions related to one ...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2015.10.002

    authors: Ronan PJ,Wongngamnit N,Beresford TP

    更新日期:2016-01-01 00:00:00

  • Exercise and Regulation of Adipokine and Myokine Production.

    abstract::Skeletal muscle and white adipose tissue are the largest organs in the human body and both tissues act as endocrine organs capable of secreting many bioactive molecules. There has been some confusion about nomenclature and we suggest that the name myokine should be restricted to a protein or molecule secreted from myo...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2015.07.002

    authors: Görgens SW,Eckardt K,Jensen J,Drevon CA,Eckel J

    更新日期:2015-01-01 00:00:00

  • Hair Follicle-Associated Pluripotent(HAP) Stem Cells.

    abstract::The hair follicle has been known, since 1990, to contain stem cells located in the bulge area. In 2003, we reported a new type of stem cell in the hair follicle that expresses the brain stem-cell marker nestin. We have termed these cells as hair-follicle-associated pluripotent (HAP) stem cells. HAP stem cells can diff...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2018.09.001

    authors: Hoffman RM,Amoh Y

    更新日期:2018-01-01 00:00:00

  • Virus-encoded 7 transmembrane receptors.

    abstract::Herpesviruses are an ancient group which have exploited gene capture of multiple cellular modulators of the immune response. Viral homologues of 7 transmembrane receptors (v7TMRs) are a consistent feature of beta- and gammaherpesviruses; the majority of the v7TMRs are homologous to cellular chemokine receptors (CKRs)....

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2014.10.010

    authors: Mølleskov-Jensen AS,Oliveira MT,Farrell HE,Davis-Poynter N

    更新日期:2015-01-01 00:00:00

  • From Genome-Wide Association Study to Phenome-Wide Association Study: New Paradigms in Obesity Research.

    abstract::Obesity is a condition in which excess body fat has accumulated over an extent that increases the risk of many chronic diseases. The current clinical classification of obesity is based on measurement of body mass index (BMI), waist-hip ratio, and body fat percentage. However, these measurements do not account for the ...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2016.02.003

    authors: Zhang YP,Zhang YY,Duan DD

    更新日期:2016-01-01 00:00:00

  • RNA processing and decay in bacteriophage T4.

    abstract::Bacteriophage T4 is the archetype of virulent phage. It has evolved very efficient strategies to subvert host functions to its benefit and to impose the expression of its genome. T4 utilizes a combination of host and phage-encoded RNases and factors to degrade its mRNAs in a stage-dependent manner. The host endonuclea...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/S0079-6603(08)00802-7

    authors: Uzan M

    更新日期:2009-01-01 00:00:00

  • Free fatty acids and skeletal muscle insulin resistance.

    abstract::Insulin resistance plays a key role in the development of type 2 diabetes mellitus and is also associated with several other diseases, such as obesity, hypertension, and cardiovascular diseases. Type 2 diabetes and obesity have become epidemic worldwide in the past few decades, and epidemiological and metabolic eviden...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-800101-1.00008-9

    authors: Rachek LI

    更新日期:2014-01-01 00:00:00

  • DNA Methylation and Psychiatric Disorders.

    abstract::DNA methylation has been an important area of research in the study of molecular mechanism to psychiatric disorders. Recent evidence has suggested that abnormalities in global methylation, methylation of genes, and pathways could play a role in the etiology of many forms of mental illness. In this article, we review t...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2018.01.006

    authors: Liu C,Jiao C,Wang K,Yuan N

    更新日期:2018-01-01 00:00:00

  • Wnt signaling and cardiac differentiation.

    abstract::The Wnt family of secreted glycoproteins participates in a wide array of biological processes, including cellular differentiation, proliferation, survival, apoptosis, adhesion, angiogenesis, hypertrophy, and aging. The canonical Wnt signaling primarily utilizes β-catenin-mediated activation of transcription, while the...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-398459-3.00007-1

    authors: Flaherty MP,Kamerzell TJ,Dawn B

    更新日期:2012-01-01 00:00:00

  • Aggregation of disease-related peptides.

    abstract::Protein misfolding and aggregation of amyloid proteins is the fundamental cause of more than 20 diseases. Molecular mechanisms of the self-assembly and the formation of the toxic aggregates are still elusive. Computer simulations have been intensively used to study the aggregation of amyloid peptides of various amino ...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章

    doi:10.1016/bs.pmbts.2019.12.002

    authors: Nguyen PH,Sterpone F,Derreumaux P

    更新日期:2020-01-01 00:00:00

  • Arrestins in bone.

    abstract::Parathyroid hormone (PTH) is the principle regulator of calcium-phosphorus metabolism and bone turnover. Because of its central role in bone remodeling, recombinant human PTH (i.e., Forteo®; PTH(1-34)) has been developed for the treatment of osteoporosis. PTH(1-34) acts principally through the type I PTH/PTH-related p...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-394440-5.00013-9

    authors: Bohinc BN,Gesty-Palmer D

    更新日期:2013-01-01 00:00:00

  • Regulators of G protein signaling in neuropsychiatric disorders.

    abstract::Regulators of G protein signaling (RGS) comprise a diverse group of about 40 proteins which determine signaling amplitude and duration via modulation of receptor/G protein or receptor/effector coupling. Several members of the RGS family are expressed in the brain, where they have precise roles in regulation of importa...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/S1877-1173(09)86010-9

    authors: Terzi D,Stergiou E,King SL,Zachariou V

    更新日期:2009-01-01 00:00:00

  • α2 Adrenergic Receptor Trafficking as a Therapeutic Target in Antidepressant Drug Action.

    abstract::Antidepressant drugs remain poorly understood, especially with respect to pharmacological mechanisms of action. This lack of knowledge results from the extreme complexity inherent to psychopharmacology, as well as to a corresponding lack of knowledge regarding depressive disorder pathophysiology. While the final analy...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2015.03.007

    authors: Cottingham C,Ferryman CJ,Wang Q

    更新日期:2015-01-01 00:00:00

  • Molecular insights into Parkinson's disease.

    abstract::Mutations in SNCA, PINK1, parkin, and DJ-1 are associated with autosomal-dominant or autosomal-recessive forms of Parkinson's disease (PD), the second most common neurodegenerative disorder. Studies on the structural and functional properties of the corresponding gene products have provided significant insights into t...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-385883-2.00011-4

    authors: Rochet JC,Hay BA,Guo M

    更新日期:2012-01-01 00:00:00

  • Amplified Detection of Prions and Other Amyloids by RT-QuIC in Diagnostics and the Evaluation of Therapeutics and Disinfectants.

    abstract::Among the most sensitive, specific and practical of methods for detecting prions are the real-time quaking-induced conversion (RT-QuIC) assays. These assays exploit the fundamental self-propagating activity of prions to amplify the presence of prion seeds by as much as a trillion-fold. The reactions can detect most of...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2017.06.003

    authors: Caughey B,Orru CD,Groveman BR,Hughson AG,Manca M,Raymond LD,Raymond GJ,Race B,Saijo E,Kraus A

    更新日期:2017-01-01 00:00:00

  • Mouse Models of Gonadotrope Development.

    abstract::The pituitary gonadotrope is central to reproductive function. Gonadotropes develop in a systematic process dependent on signaling factors secreted from surrounding tissues and those produced within the pituitary gland itself. These signaling pathways are important for stimulating specific transcription factors that u...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2016.08.001

    authors: Stallings CE,Kapali J,Ellsworth BS

    更新日期:2016-01-01 00:00:00

  • Cadherin dynamics during neural crest cell ontogeny.

    abstract::Cell membrane-associated junctional complexes mediate cell-cell adhesion, intercellular interactions, and other fundamental processes required for proper embryo morphogenesis. Cadherins are calcium-dependent transmembrane proteins at the core of adherens junctions and are expressed in distinct spatiotemporal patterns ...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-394311-8.00013-3

    authors: Taneyhill LA,Schiffmacher AT

    更新日期:2013-01-01 00:00:00

  • G protein-coupled receptor heterocomplexes in neuropsychiatric disorders.

    abstract::G protein-coupled receptors (or GPCRs) represent the largest family of membrane proteins in the human genome and are the target of approximately half of all therapeutic drugs. GPCRs contain a conserved structure of seven transmembrane domains. Their amino terminus is located extracellularly, whereas the carboxy termin...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-386931-9.00008-8

    authors: Moreno JL,Holloway T,González-Maeso J

    更新日期:2013-01-01 00:00:00

  • Data-driven modeling of synaptic transmission and integration.

    abstract::In this chapter, we describe how to create mathematical models of synaptic transmission and integration. We start with a brief synopsis of the experimental evidence underlying our current understanding of synaptic transmission. We then describe synaptic transmission at a particular glutamatergic synapse in the mammali...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-397897-4.00004-8

    authors: Rothman JS,Silver RA

    更新日期:2014-01-01 00:00:00

  • From stem cells to cardiomyocytes: the role of forces in cardiac maturation, aging, and disease.

    abstract::Stem cell differentiation into a variety of lineages is known to involve signaling from the extracellular niche, including from the physical properties of that environment. What regulates stem cell responses to these cues is there ability to activate different mechanotransductive pathways. Here, we will review the str...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-394624-9.00009-9

    authors: Kaushik G,Engler AJ

    更新日期:2014-01-01 00:00:00

  • The role of bombesin and bombesin-related peptides in the short-term control of food intake.

    abstract::Bombesin (Bn) is a 14-amino acid peptide isolated from the skin of the frog Bombina bombina. The mammalian homologs of this peptide include three forms of gastrin-releasing peptide (GRP): GRP-10, GRP-27, and GRP-29, and a 10-amino acid peptide referred to as neuromedin-B (NMB). These peptides evoke a number of respons...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/B978-0-12-386933-3.00010-8

    authors: Sayegh AI

    更新日期:2013-01-01 00:00:00

  • Alphavirus entry into host cells.

    abstract::Viruses have evolved to exploit the vast complexity of cellular processes for their success within the host cell. The entry mechanisms of enveloped viruses (viruses with a surrounding outer lipid bilayer membrane) are usually classified as being either endocytotic or fusogenic. Different mechanisms have been proposed ...

    journal_title:Progress in molecular biology and translational science

    pub_type: 杂志文章,评审

    doi:10.1016/bs.pmbts.2014.10.002

    authors: Vancini R,Hernandez R,Brown D

    更新日期:2015-01-01 00:00:00