Size of genetic bottlenecks leading to virus fitness loss is determined by mean initial population fitness.

Abstract:

:Genetic bottlenecks are important events in the genetic diversification of organisms and colonization of new ecological niches. Repeated bottlenecking of RNA viruses often leads to fitness losses due to the operation of Muller's ratchet. Herein we use vesicular stomatitis virus to determine the transmission population size which leads to fitness decreases of virus populations. Remarkably, the effective size of a genetic bottleneck associated with fitness loss is greater when the fitness of the parental population increases. For example, for starting virus populations with low fitness, population transfers of five-clone-to-five-clone passages resulted in a fitness increase. However, when a parental population with high fitness was transferred, 30-clone-to-30-clone passages were required simply to maintain fitness values.

journal_name

J Virol

journal_title

Journal of virology

authors

Novella IS,Elena SF,Moya A,Domingo E,Holland JJ

doi

10.1128/JVI.69.5.2869-2872.1995

subject

Has Abstract

pub_date

1995-05-01 00:00:00

pages

2869-72

issue

5

eissn

0022-538X

issn

1098-5514

journal_volume

69

pub_type

杂志文章
  • The Kaposi's sarcoma-associated herpesvirus G protein-coupled receptor has broad signaling effects in primary effusion lymphoma cells.

    abstract::Kaposi's sarcoma-associated herpesvirus (KSHV/human herpesvirus 8 [HHV-8]) is a gamma-2-herpesvirus responsible for Kaposi's sarcoma as well as primary effusion lymphoma (PEL). KSHV is a lymphotropic virus that has pirated many mammalian genes involved in inflammation, cell cycle control, and angiogenesis. Among these...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.77.1.57-67.2003

    authors: Cannon M,Philpott NJ,Cesarman E

    更新日期:2003-01-01 00:00:00

  • Expression of human decay-accelerating factor on intestinal epithelium of transgenic mice does not facilitate infection by the enteral route.

    abstract:UNLABELLED:In vitro, infection of polarized human intestinal epithelial cells by coxsackievirus B3 (CVB3) depends on virus interaction with decay-accelerating factor (DAF), a receptor expressed on the apical cell surface. Although mice are highly susceptible to CVB3 infection when virus is delivered by intraperitoneal ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.03468-14

    authors: Pan J,Zhang L,Odenwald MA,Shen L,Turner JR,Bergelson JM

    更新日期:2015-04-01 00:00:00

  • Human immunodeficiency virus type 1 gag-specific mucosal immunity after oral immunization with papillomavirus pseudoviruses encoding gag.

    abstract::Mucosal surfaces are the primary portals for human immunodeficiency virus (HIV) transmission. Because systemic immunization, in general, does not induce effective mucosal immune responses, a mucosal HIV vaccine is urgently needed. For this study, we developed papillomavirus pseudoviruses that express HIV-1 Gag. The ps...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.78.19.10249-10257.2004

    authors: Zhang H,Fayad R,Wang X,Quinn D,Qiao L

    更新日期:2004-10-01 00:00:00

  • Immunotyping of human immunodeficiency virus type 1 (HIV): an approach to immunologic classification of HIV.

    abstract::Because immunologic classification of human immunodeficiency virus type 1 (HIV) might be more relevant than genotypic classification for designing polyvalent vaccines, studies were undertaken to determine whether immunologically defined groups of HIV ("immunotypes") could be identified. For these experiments, the V3 r...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.73.5.4042-4051.1999

    authors: Zolla-Pazner S,Gorny MK,Nyambi PN,VanCott TC,Nádas A

    更新日期:1999-05-01 00:00:00

  • Overexpression of the vaccinia virus A38L integral membrane protein promotes Ca2+ influx into infected cells.

    abstract::The vaccinia virus Western Reserve A38L protein is a hydrophobic integral membrane glycoprotein with amino acid similarity to mammalian integrin-associated protein. The protein has an N-terminal immunoglobulin superfamily domain, followed by five membrane-spanning domains and a short cytoplasmic tail. Deletion of the ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.70.2.905-914.1996

    authors: Sanderson CM,Parkinson JE,Hollinshead M,Smith GL

    更新日期:1996-02-01 00:00:00

  • Mapping of betapapillomavirus human papillomavirus 5 transcription and characterization of viral-genome replication function.

    abstract::Betapapillomavirus replication and transcription have not been studied in detail because of a lack of suitable cellular systems supporting human papillomavirus (HPV) genome replication. We have recently shown that the human osteosarcoma cell line U2OS provides a useful environment for the genome replication of many di...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01841-13

    authors: Sankovski E,Männik A,Geimanen J,Ustav E,Ustav M

    更新日期:2014-01-01 00:00:00

  • Synthesis of multimeric polyoma virus DNA in mouse L-cells: role of the tsA1S9 gene product.

    abstract::Several different forms of progeny viral DNA can be identified in polyoma virus (Py)-infected mouse L-cells. The majority comprise mature form I superhelical DNA and the circular, double-stranded "theta" replicating intermediates in which the progeny DNA strands never exceed the unit genome length of the template. The...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.46.3.768-777.1983

    authors: Ganz PR,Sheinin R

    更新日期:1983-06-01 00:00:00

  • Human T-cell leukemia virus type 1 Tax transactivates the human proliferating cell nuclear antigen promoter.

    abstract::The human T-cell leukemia virus type 1 (HTLV-1) transforming protein, Tax, is a potent transactivator of both viral and cellular gene expression. The ability of Tax to transform cells is believed to depend on its transactivation of cellular-growth-regulatory genes. Expression of proliferating cell nuclear antigen (PCN...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.71.2.1181-1190.1997

    authors: Ressler S,Morris GF,Marriott SJ

    更新日期:1997-02-01 00:00:00

  • Replication-defective bovine adenovirus type 3 as an expression vector.

    abstract::Although recombinant human adenovirus (HAV)-based vectors offer several advantages for somatic gene therapy and vaccination over other viral vectors, it would be desirable to develop alternative vectors with prolonged expression and decreased toxicity. Toward this objective, a replication-defective bovine adenovirus t...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.73.11.9137-9144.1999

    authors: Reddy PS,Idamakanti N,Chen Y,Whale T,Babiuk LA,Mehtali M,Tikoo SK

    更新日期:1999-11-01 00:00:00

  • Use of antibodies directed against synthetic peptides for identifying cDNA clones, establishing reading frames, and deducing the gene order of measles virus.

    abstract::A number of cDNA clones complementary to measles virus mRNA and 50S genome RNA have been generated. These clones have been mapped by restriction enzyme analysis and were subsequently sequenced by the method of Maxam and Gilbert (A. M. Maxam and W. Gilbert, Methods Enzymol. 65:499-560, 1980). Computer analysis of these...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.54.1.186-193.1985

    authors: Richardson CD,Berkovich A,Rozenblatt S,Bellini WJ

    更新日期:1985-04-01 00:00:00

  • HIV-1 Envelope Glycoprotein Trafficking through the Endosomal Recycling Compartment Is Required for Particle Incorporation.

    abstract::The human immunodeficiency virus type 1 (HIV-1) envelope glycoprotein (Env) encodes specific trafficking signals within its long cytoplasmic tail (CT) that regulate incorporation into HIV-1 particles. Rab11-family interacting protein 1C (FIP1C) and Rab14 are host trafficking factors required for Env particle incorpora...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01893-17

    authors: Kirschman J,Qi M,Ding L,Hammonds J,Dienger-Stambaugh K,Wang JJ,Lapierre LA,Goldenring JR,Spearman P

    更新日期:2018-02-12 00:00:00

  • The product of the herpes simplex virus type 1 UL25 gene is required for encapsidation but not for cleavage of replicated viral DNA.

    abstract::The herpes simplex virus type 1 (HSV-1) UL25 gene contains a 580-amino-acid open reading frame that codes for an essential protein. Previous studies have shown that the UL25 gene product is a virion component (M. A. Ali et al., Virology 216:278-283, 1996) involved in virus penetration and capsid assembly (C. Addison e...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.72.2.1060-1070.1998

    authors: McNab AR,Desai P,Person S,Roof LL,Thomsen DR,Newcomb WW,Brown JC,Homa FL

    更新日期:1998-02-01 00:00:00

  • Simian virus 40-host cell interaction during lytic infection.

    abstract::Both exponentially growing and serum-arrested subcloned CV-1 cell cultures were infected with simian virus 40 (SV40). By 24 h after infection 96% of the nuclei of these permissive cells contained SV40 T-antigen. Analysis of the average DNA content per cell at various times after infection indicated that by 24 h most o...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.30.1.76-83.1979

    authors: Gershey EL

    更新日期:1979-04-01 00:00:00

  • Engineering of adenovirus vectors containing heterologous peptide sequences in the C terminus of capsid protein IX.

    abstract::The utility of the present generation of adenovirus (Ad) vectors for gene therapy applications could be improved by restricting native viral tropism to selected cell types. In order to achieve modification of Ad tropism, we proposed to exploit a minor component of viral capsid, protein IX (pIX), for genetic incorporat...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.76.14.6893-6899.2002

    authors: Dmitriev IP,Kashentseva EA,Curiel DT

    更新日期:2002-07-01 00:00:00

  • DC-SIGN facilitates fusion of dendritic cells with human T-cell leukemia virus type 1-infected cells.

    abstract::Interactions between the oncogenic retrovirus human T-cell leukemia virus type 1 (HTLV-1) and dendritic cells (DCs) are poorly characterized. We show here that monocyte-derived DCs form syncytia and are infected upon coculture with HTLV-1-infected lymphocytes. We examined the role of DC-specific ICAM-3-grabbing nonint...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.80.10.4771-4780.2006

    authors: Ceccaldi PE,Delebecque F,Prevost MC,Moris A,Abastado JP,Gessain A,Schwartz O,Ozden S

    更新日期:2006-05-01 00:00:00

  • Lymphocyte proliferative responses to separated bovine herpesvirus 1 proteins in immune cattle.

    abstract::The immune response to bovine herpesvirus 1 (BHV-1) infection can protect cattle from subsequent challenge with the virus. This protection involves a variety of defensive strategies, and the activation of most of these defenses requires the recognition of viral proteins by the cellular immune system. To identify some ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.64.10.5114-5122.1990

    authors: Hutchings DL,van Drunen Littel-van den Hurk S,Babiuk LA

    更新日期:1990-10-01 00:00:00

  • Characterization of the RNA-binding domains in the replicase proteins of tomato bushy stunt virus.

    abstract::Tomato bushy stunt virus (TBSV), a tombusvirus with a nonsegmented, plus-stranded RNA genome, codes for two essential replicase proteins. The sequence of one of the replicase proteins, namely p33, overlaps with the N-terminal domain of p92, which contains the signature motifs of RNA-dependent RNA polymerases (RdRps) i...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.77.17.9244-9258.2003

    authors: Rajendran KS,Nagy PD

    更新日期:2003-09-01 00:00:00

  • Quantitative analysis of the hepatitis C virus replication complex.

    abstract::The hepatitis C virus (HCV) encodes a large polyprotein; therefore, all viral proteins are produced in equimolar amounts regardless of their function. The aim of our study was to determine the ratio of nonstructural proteins to RNA that is required for HCV RNA replication. We analyzed Huh-7 cells harboring full-length...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.79.21.13594-13605.2005

    authors: Quinkert D,Bartenschlager R,Lohmann V

    更新日期:2005-11-01 00:00:00

  • Sorting of Marburg virus surface protein and virus release take place at opposite surfaces of infected polarized epithelial cells.

    abstract::Marburg virus, a filovirus, causes severe hemorrhagic fever with hitherto poorly understood molecular pathogenesis. We have investigated here the vectorial transport of the surface protein GP of Marburg virus in polarized epithelial cells. To this end, we established an MDCKII cell line that was able to express GP per...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.75.3.1274-1283.2001

    authors: Sänger C,Mühlberger E,Ryabchikova E,Kolesnikova L,Klenk HD,Becker S

    更新日期:2001-02-01 00:00:00

  • Equine-Origin Immunoglobulin Fragments Protect Nonhuman Primates from Ebola Virus Disease.

    abstract::Ebola virus (EBOV) infections result in aggressive hemorrhagic fever in humans, with fatality rates reaching 90% and with no licensed specific therapeutics to treat ill patients. Advances over the past 5 years have firmly established monoclonal antibody (MAb)-based products as the most promising therapeutics for treat...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01548-18

    authors: Wang H,Wong G,Zhu W,He S,Zhao Y,Yan F,Rahim MN,Bi Y,Zhang Z,Cheng K,Jin H,Cao Z,Zheng X,Gai W,Bai J,Chen W,Zou Y,Gao Y,Gao GF,Yang S,Xia X,Qiu X

    更新日期:2019-02-19 00:00:00

  • Antigenic properties and cellular localization of herpes simplex virus glycoprotein H synthesized in a mammalian cell expression system.

    abstract::Herpes simplex virus type 1 glycoprotein H (HSV-1 gH) was synthesized in an inducible mammalian cell expression system, and its properties were examined. The gH coding sequence, together with the stable 5' untranslated leader sequence from xenopus beta-globin, was placed under control of the strong promoter from the h...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.63.11.4744-4755.1989

    authors: Gompels UA,Minson AC

    更新日期:1989-11-01 00:00:00

  • Introduction of interrupted secondary structure in supercoiled DNA as a function of superhelix density: consideration of hairpin structures in superhelical DNA.

    abstract::PM2 DNA was prepared with different superhelical densities (sigma) in order to examine the relationship betweenn supercoiling and the occurrence of a region(s) of unpaired bases in this DNA. A previous study showed that CH3HgOH reacts with native superhelical PM2 DNA more rapidly than the nicked form II. This evaluati...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.18.1.195-204.1976

    authors: Woodworth-Gutai M,Lebowitz J

    更新日期:1976-04-01 00:00:00

  • Human rotavirus-specific IgM Memory B cells have differential cloning efficiencies and switch capacities and play a role in antiviral immunity in vivo.

    abstract::Protective immunity to rotavirus (RV) is primarily mediated by antibodies produced by RV-specific memory B cells (RV-mBc). Of note, most of these cells express IgM, but the function of this subset is poorly understood. Here, using limiting dilution assays of highly sort-purified human IgM(+) mBc, we found that 62% and...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.01466-12

    authors: Narváez CF,Feng N,Vásquez C,Sen A,Angel J,Greenberg HB,Franco MA

    更新日期:2012-10-01 00:00:00

  • Kaposi Sarcoma-Associated Herpesvirus Glycoprotein H Is Indispensable for Infection of Epithelial, Endothelial, and Fibroblast Cell Types.

    abstract::Kaposi sarcoma-associated herpesvirus (KSHV) is an emerging pathogen and is the causative infectious agent of Kaposi sarcoma and two malignancies of B cell origin. To date, there is no licensed KSHV vaccine. Development of an effective vaccine against KSHV continues to be limited by a poor understanding of how the vir...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00630-19

    authors: Muniraju M,Mutsvunguma LZ,Foley J,Escalante GM,Rodriguez E,Nabiee R,Totonchy J,Mulama DH,Nyagol J,Wussow F,Barasa AK,Brehm M,Ogembo JG

    更新日期:2019-07-30 00:00:00

  • Identification of a lytic-phase origin of DNA replication in human herpesvirus 6B strain Z29.

    abstract::DNA sequences which have structural features suggestive of their functioning as an origin of lytic-phase DNA replication were previously identified in both human herpesvirus 6B strain Z29 [HHV-6B (Z29)] and in HHV-6A (U1102). Plasmid constructs containing the putative HHV-6B (Z29) oriLyt element were replicated after ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.67.12.7680-7683.1993

    authors: Dewhurst S,Dollard SC,Pellett PE,Dambaugh TR

    更新日期:1993-12-01 00:00:00

  • Inhibition of hepatitis B virus replication by cIAP2 involves accelerating the ubiquitin-proteasome-mediated destruction of polymerase.

    abstract::Cellular inhibitor of apoptosis protein 2 (cIAP2) is a potent suppressor of apoptotic cell death. We have shown previously that cIAP2 is involved in the tumor necrosis factor alpha (TNF-α)-induced anti-hepatitis B virus (HBV) response; however, the mechanism for this antiviral effect remains unclear. In the present st...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.00879-11

    authors: Wang Z,Ni J,Li J,Shi B,Xu Y,Yuan Z

    更新日期:2011-11-01 00:00:00

  • Cell penetration and trafficking of polyomavirus.

    abstract::The murine polyomavirus (Py) enters mouse fibroblasts and kidney epithelial cells via an endocytic pathway that is caveola-independent (as well as clathrin-independent). In contrast, uptake of simian virus 40 into the same cells is dependent on caveola. Following the initial uptake of Py, both microtubules and microfi...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/jvi.77.4.2615-2622.2003

    authors: Gilbert JM,Goldberg IG,Benjamin TL

    更新日期:2003-02-01 00:00:00

  • Isolation and characterization of current human coronavirus strains in primary human epithelial cell cultures reveal differences in target cell tropism.

    abstract::The human airway epithelium (HAE) represents the entry port of many human respiratory viruses, including human coronaviruses (HCoVs). Nowadays, four HCoVs, HCoV-229E, HCoV-OC43, HCoV-HKU1, and HCoV-NL63, are known to be circulating worldwide, causing upper and lower respiratory tract infections in nonhospitalized and ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.03368-12

    authors: Dijkman R,Jebbink MF,Koekkoek SM,Deijs M,Jónsdóttir HR,Molenkamp R,Ieven M,Goossens H,Thiel V,van der Hoek L

    更新日期:2013-06-01 00:00:00

  • Effects of herpes simplex virus on mRNA stability.

    abstract::Herpes simplex virus virions contain one or more functions which mediate shutoff of host protein synthesis, disaggregation of host polyribosomes, and degradation of host mRNA. We studied aspects of the host shutoff mechanism by using herpes simplex virus type 1 mutants deficient in virion-induced shutoff of host prote...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.61.7.2198-2207.1987

    authors: Strom T,Frenkel N

    更新日期:1987-07-01 00:00:00

  • Transcriptional coactivators are not required for herpes simplex virus type 1 immediate-early gene expression in vitro.

    abstract::Virion protein 16 (VP16) of herpes simplex virus type 1 (HSV-1) is a potent transcriptional activator of viral immediate-early (IE) genes. The VP16 activation domain can recruit various transcriptional coactivators to target gene promoters. However, the role of transcriptional coactivators in HSV-1 IE gene expression ...

    journal_title:Journal of virology

    pub_type: 杂志文章

    doi:10.1128/JVI.02349-08

    authors: Kutluay SB,DeVos SL,Klomp JE,Triezenberg SJ

    更新日期:2009-04-01 00:00:00