Characterization of the role of individual protein binding motifs within the hepatitis B virus enhancer I on X promoter activity using linker scanning mutagenesis.

Abstract:

:A combination of linker scanning mutagenesis and deletional analyses has been used to determine the role of individual DNA-protein binding sites on expression from the hepatitis B virus (HBV) enhancer I-X promoter (map position (mp) 1042-1354, HBV adw2). Linker scanning mutation of the EF-C site caused a 67.5% drop in X promoter activity in HuH7 cells, but had no effect in HepG2 or HepSK cells. Mutation of the E element resulted in an approximately 50% reduction in X promoter activity in HuH7, HepG2, and HepSK cells. Deletional analysis showed that sequences upstream of the EF-C site (mp 1163) were required for full X promoter activity and implicated the NF-1a site as being sufficient for basal X promoter activity. However, PCR-directed linker scanning mutation of the NF-1a site did not cause a reduction in X promoter activity, indicating that this site was not an essential component of the X promoter. Taken together, these results indicated that multiple, partially redundant protein:DNA interactions in the enhancer I are essential for full X promoter activity. The lack of an essential basal promoter element supports the suggestion that the two separate HBV enhancer elements (enhI and enhII) were created by integration of the X gene into a primordial enhancer element.

journal_name

Virology

journal_title

Virology

authors

Gustin K,Shapiro M,Lee W,Burk RD

doi

10.1006/viro.1993.1173

subject

Has Abstract

pub_date

1993-04-01 00:00:00

pages

653-60

issue

2

eissn

0042-6822

issn

1096-0341

pii

S0042-6822(83)71173-6

journal_volume

193

pub_type

杂志文章

相关文献

VIROLOGY文献大全
  • Polymorphisms of the region of the Epstein-Barr virus genome which disrupts latency.

    abstract::The nucleotide sequence of the portion of naturally occurring defective EBV (HR-1) DNA (designated het DNA) which is responsible for disruption of EBV latency has been determined and compared with the regions of the standard HR-1 viral genome from which it was derived. This rearranged 2.7-kbp DNA fragment represented ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(88)90599-5

    authors: Jenson HB,Miller G

    更新日期:1988-08-01 00:00:00

  • Changing sensitivity to broadly neutralizing antibodies b12, 2G12, 2F5, and 4E10 of primary subtype B human immunodeficiency virus type 1 variants in the natural course of infection.

    abstract::The conserved nature of the epitopes of the four broadly neutralizing antibodies (BNAbs), b12, 2G12, 2F5, and 4E10, may imply that the sensitivity of HIV-1 for these BNAbs remains fairly constant over the course of infection. Here, we demonstrate that viruses isolated early during the course of infection were mostly s...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2009.05.028

    authors: Bunnik EM,van Gils MJ,Lobbrecht MS,Pisas L,van Nuenen AC,Schuitemaker H

    更新日期:2009-08-01 00:00:00

  • Active and separate secretion of fiber and penton base during the early phase of Ad2 or Ad5 infection.

    abstract::Fiber and penton base overproduced in adenovirus (Ad) infected cells can be secreted prior to progeny release and thereby regulate progeny spread. We aimed to investigate the mechanisms of fiber and penton base secretion in Ad2- or Ad5-infected A549 cells. Our flow cytometry analyses detected abundant surface fiber mo...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2017.02.018

    authors: Yan Y,Zhang B,Hou W,Lin H,Rebetz J,Hong SS,Wang Y,Ran L,Fan X

    更新日期:2017-05-01 00:00:00

  • Host cell p53 associates with the feline calicivirus major viral capsid protein VP1, the protease-polymerase NS6/7, and the double-stranded RNA playing a role in virus replication.

    abstract::p53 is implicated in several cellular pathways such as induction of cell-cycle arrest, differentiation, senescence, and apoptosis. p53 is activated by a broad range of stress signals, including viral infections. While some viruses activate p53, others induce its inactivation, and occasionally p53 is differentially mod...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2020.08.008

    authors: Trujillo-Uscanga A,Gutiérrez-Escolano AL

    更新日期:2020-11-01 00:00:00

  • Structural elements of primary CCR5-using HIV-1 gp120 proteins influencing sensitivity and resistance to the broadly neutralizing monoclonal antibody b12.

    abstract::Structure-guided approaches to HIV-1 vaccine design depend on knowledge of the presentation of neutralizing epitopes on gp120, such as the epitope for the broadly neutralizing mAb b12. Here, we characterized predicted three-dimensional structures of functionally diverse gp120 proteins in their b12-bound conformation, ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2012.06.024

    authors: Sterjovski J,Churchill MJ,Ellett A,Wesselingh SL,Ramsland PA,Gorry PR

    更新日期:2012-10-25 00:00:00

  • A novel method for obtaining poliovirus 14 S pentamers from procapsids and their self-assembly into virus-like shells.

    abstract::Poliovirus procapsids, isolated and partially purified from infected HeLa cells, were found to dissociate into 14 S pentamers following freezing at -20 degrees overnight. Unlike pentameric subunits isolated directly from virus-infected cells or those obtained by alkaline treatment of procapsids, the "freeze-dissociate...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(87)90465-x

    authors: Onodera S,Phillips BA

    更新日期:1987-08-01 00:00:00

  • Deletion of pe38 attenuates AcMNPV genome replication, budded virus production, and virulence in heliothis virescens.

    abstract::The pe38 gene product of Autographa californica M nucleopolyhedrovirus (AcMNPV) has been shown to be involved in transcriptionally transactivating viral genes and augmenting viral DNA replication in transient assays. To assess the role of pe38 during infection, we generated a knockout virus, Delta pe38-E9/E9, in which...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/s0042-6822(03)00143-0

    authors: Milks ML,Washburn JO,Willis LG,Volkman LE,Theilmann DA

    更新日期:2003-06-05 00:00:00

  • Kinetics of cytokine mRNA expression in the central nervous system following lethal and nonlethal coronavirus-induced acute encephalomyelitis.

    abstract::The potential role(s) of cytokines in the reduction of infectious virus and persistent viral infection in the central nervous system was examined by determining the kinetics of cytokine mRNA expression following infection with the neurotropic JHM strain of mouse hepatitis virus. Mice were infected with an antibody esc...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1997.8613

    authors: Parra B,Hinton DR,Lin MT,Cua DJ,Stohlman SA

    更新日期:1997-07-07 00:00:00

  • Biological activity of transcripts synthesized in vitro from full-length and mutated DNA copies of tobacco rattle virus RNA 2.

    abstract::Full-length cDNA clones of RNA 2 of tobacco rattle virus (TRV) strain PLB have been cloned into the transcription vector pPM1. Products of in vitro transcription by Escherichia coli RNA polymerase, either capped or uncapped, were as infectious as native RNA 2 when coinoculated with RNA 1 of TRV strain TCM. At least 70...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(89)90222-5

    authors: Angenent GC,Posthumus E,Bol JF

    更新日期:1989-11-01 00:00:00

  • Molecular characterization of Drosophila cells persistently infected with Flock House virus.

    abstract::Little is known about the molecular determinants causing and sustaining viral persistent infections at the cellular level. We found that Drosophila cells persistently infected (PI) with Flock House virus (FHV) invariably harbor defective viral RNAs, which are replicated by the FHV RNA-dependent RNA polymerase. Some de...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2011.08.002

    authors: Jovel J,Schneemann A

    更新日期:2011-10-10 00:00:00

  • Reduced antigenicity of the hepatitis B virus HBsAg protein arising as a consequence of sequence changes in the overlapping polymerase gene that are selected by lamivudine therapy.

    abstract::The prevalence of hepatitis B virus vaccine escape mutants has increased as a consequence of the introduction of global vaccination programs. Furthermore and as a consequence of the organization of the genome of hepatitis B virus (HBV) into overlapping reading frames, the selection of polymerase mutants during long-te...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2001.1246

    authors: Torresi J,Earnest-Silveira L,Deliyannis G,Edgtton K,Zhuang H,Locarnini SA,Fyfe J,Sozzi T,Jackson DC

    更新日期:2002-02-15 00:00:00

  • Bovine aortic endothelial cells are susceptible to hantavirus infection; a new aspect in hantavirus ecology.

    abstract::Hantaviruses are enveloped RNA viruses that belong to the family Bunyaviridae. They are the causative agents of hemorrhagic fever with renal syndrome (HFRS) and hantavirus pulmonary syndrome (HPS). Hantaviruses show a worldwide distribution with specific rodent species as natural hosts. It is known that rodents can tr...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2003.09.006

    authors: Muranyi W,Kehm R,Bahr U,Müller S,Handermann M,Darai G,Zeier M

    更新日期:2004-01-05 00:00:00

  • BST-2 mediated restriction of simian-human immunodeficiency virus.

    abstract::Pathogenic simian-human immunodeficiency viruses (SHIV) contain HIV-1 Vpu and SIV Nef, both shown to counteract BST-2 (HM1.24; CD317; tetherin) inhibition of virus release in a species-specific manner. We show that human and pig-tailed BST-2 (ptBST-2) restrict SHIV. We found that sequential "humanization" of the trans...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2010.07.021

    authors: Ruiz A,Lau D,Mitchell RS,Hill MS,Schmitt K,Guatelli JC,Stephens EB

    更新日期:2010-10-25 00:00:00

  • FR-like EBNA1 binding repeats in the human genome.

    abstract::Epstein-Barr virus (EBV) is widely spread in the human population. EBV nuclear antigen 1 (EBNA1) is a transcription factor that activates viral genes and is necessary for viral replication and partitioning, which binds the EBV genome cooperatively. We identify similar EBNA1 repeat binding sites in the human genome usi...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2010.06.040

    authors: d'Hérouël AF,Birgersdotter A,Werner M

    更新日期:2010-09-30 00:00:00

  • Tobacco mosaic virus coat protein and the large subunit of the host protein ribulose-1,5-biphosphate carboxylase share a common antigenic determinant.

    abstract::An immunological relationship was detected between the coat protein of the common (U1) strain of tobacco mosaic virus (TMV) and the large subunit of the ubiquitous CO2-fixing host enzyme, ribulose-1,5-biphosphate carboxylase (RuBisCo). When assayed by Western immunoblotting or indirect ELISA, polyclonal antisera to TM...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(86)90186-8

    authors: Dietzgen RG,Zaitlin M

    更新日期:1986-11-01 00:00:00

  • Varicella-zoster virus-specific gp140: a highly immunogenic and disulfide-linked structural glycoprotein.

    abstract::A 140,000-dalton disulfide-linked glycoprotein (gp140) specified by varicella-zoster virus (VZV) in infected cultured cells was identified and precipitated by two murine monoclonal antibodies (VZ-151 and VZ-158). When analyzed under reducing conditions by sodium dodecyl sulfate-polyacrylamide gel electrophoresis, gp14...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(84)90098-9

    authors: Grose C,Edwards DP,Weigle KA,Friedrichs WE,McGuire WL

    更新日期:1984-01-15 00:00:00

  • Scavenger receptor-mediated Ad5 entry and acLDL accumulation in monocytes/macrophages synergistically trigger innate responses against viral infection.

    abstract::Adenovirus serotype 5 (Ad5) is a common cause of respiratory tract infection, and populations worldwide have high prevalence of anti-Ad5 antibodies, implying extensively prior infection. Ad5 infection potently activates the host innate defense and inflammation, but the molecular mechanisms are not completely clarified...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2018.04.005

    authors: Li P,Feng F,Pan E,Fan X,Yang Q,Guan M,Chen L,Sun C

    更新日期:2018-06-01 00:00:00

  • Further studies of the RNA synthesis phenotype selected during persistent infection with vesicular stomatitis virus.

    abstract::Vesicular stomatitis virus (VSV) isolated from two independently established lines of persistently infected mouse L cells expressed an altered phenotype of RNA synthesis at 37 degrees, the temperature at which the persistently infected cultures were maintained (T.K. Frey and J.S. Youngner, 1982, J. Virol. 44, 167-174)...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(84)90260-5

    authors: Frey TK,Youngner JS

    更新日期:1984-07-15 00:00:00

  • Ligation of double-stranded and single-stranded [oligo(dT)] DNA by vaccinia virus DNA ligase.

    abstract::Vaccinia virus DNA ligase has been expressed in Escherichia coli, purified, and biochemically characterized. The enzyme ligates double-stranded (ds) DNA substrates with either cohesive or blunt-end termini and the latter reaction is stimulated by PEG. Vaccinia virus DNA ligase can also ligate oligo(dT) when annealed t...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1996.0358

    authors: Odell M,Kerr SM,Smith GL

    更新日期:1996-07-01 00:00:00

  • Induction of apoptosis by the Vpr protein of human immunodeficiency virus type 1 occurs independently of G(2) arrest of the cell cycle.

    abstract::The HIV-1 accessory gene product Vpr can inhibit cell proliferation via cell cycle arrest at the G(2) phase, and it can induce apoptosis after G(2) arrest. We found recently that C81, a carboxy-terminally truncated form of Vpr, induced apoptosis via G(1) arrest but did not induce G(2) arrest of the cell cycle. Thus, i...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2000.0534

    authors: Nishizawa M,Kamata M,Mojin T,Nakai Y,Aida Y

    更新日期:2000-10-10 00:00:00

  • Polyoma virus middle T is essential for virus replication and persistence as well as for tumor induction in mice.

    abstract::A mutant strain of polyoma virus encoding a truncated middle T protein has been studied for its ability to replicate and induce tumors following inoculation into newborn mice. Virus replication in the acute period prior to expected onset of tumors as well as persistence of virus in older animals were followed. The mut...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(92)90247-m

    authors: Freund R,Sotnikov A,Bronson RT,Benjamin TL

    更新日期:1992-12-01 00:00:00

  • Isoprenylation of large hepatitis delta antigen is necessary but not sufficient for hepatitis delta virus assembly.

    abstract::Hepatitis delta virus (HDV) encodes two proteins, the small hepatitis delta antigen (SHDAg) and large hepatitis delta antigen (LHDAg). Both proteins are identical except for the presence of additional 19 amino acids at the C terminus of LHDAg. While SHDAg is required for HDV RNA replication, LHDAg inhibits replication...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1994.1109

    authors: Lee CZ,Chen PJ,Lai MM,Chen DS

    更新日期:1994-02-15 00:00:00

  • Upstream binding factor inhibits herpes simplex virus replication.

    abstract::Herpes simplex virus 1 (HSV-1) infection induces changes to the host cell nucleus including relocalization of the cellular protein Upstream Binding Factor (UBF) from the nucleolus to viral replication compartments (VRCs). Herein, we tested the hypothesis that UBF is recruited to VRCs to promote viral DNA replication. ...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2015.04.003

    authors: Ouellet Lavallée G,Pearson A

    更新日期:2015-09-01 00:00:00

  • Expression and purification of a recombinant tobacco etch virus NIa proteinase: biochemical analyses of the full-length and a naturally occurring truncated proteinase form.

    abstract::The tobacco etch virus 27-kDa nuclear inclusion a (NIa) proteinase was expressed in Escherichia coli as a recombinant fusion protein containing a seven-histidine tag at the amino-terminus. Catalytically active and inactive (by virtue of a single amino acid change) forms of the proteinase were purified to homogeneity i...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1995.1331

    authors: Parks TD,Howard ED,Wolpert TJ,Arp DJ,Dougherty WG

    更新日期:1995-06-20 00:00:00

  • In vitro packaging of plasmid DNA oligomers by Salmonella phage P22: independence of the pac site, and evidence for the termination cut in vitro.

    abstract::In vitro packaging experiments with phage P22 using artificially ligated plasmid concatemers have shown that the pac site is not necessary for DNA packaging although in vivo this initiation signal is indispensable. This indicates that the phage-coded protein gp3 also executes other important functions during phage mat...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(85)90273-9

    authors: Behnisch W,Schmieger H

    更新日期:1985-07-30 00:00:00

  • Mutational profiling of the variability of individual amino acid positions in the hepatitis B virus matrix domain.

    abstract::The hepatitis B virus (HBV) is formed by budding. A stretch of 22 amino acids (aa) (matrix domain, MD, R103 - S124) in the large envelope protein L is crucial for virion formation and probably establishes contact to the nucleocapsid. Here, we assess the impact of sequence variations at numerous individual aa positions...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/j.virol.2014.04.030

    authors: Schittl B,Bruss V

    更新日期:2014-06-01 00:00:00

  • In vivo selection of duck hepatitis B virus pre-S variants which escape from neutralization.

    abstract::To better understand the role of specific residues within the duck hepatitis B virus (DHBV) pre-S protein in neutralization and infectivity, we have selected and identified pre-S variants which escape neutralization. A highly neutralizing monoclonal antibody (Mab 900) which recognizes an epitope 83IPQPQWTP90 localized...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.1997.8665

    authors: Sunyach C,Chassot S,Jamard C,Kay A,Trepo C,Cova L

    更新日期:1997-08-04 00:00:00

  • Deoxyribonucleoprotein complexes and DNA synthesis of herpes simplex virus type 1.

    abstract::Two temperature-sensitive mutants of herpes simplex virus type 1 in complementation group 1-1 were analyzed to determine if the major DNA-binding protein they produced was thermolabile. Cells infected with these mutants were analyzed for deoxyribonucleoprotein complexes containing the DNA-binding protein. These comple...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(84)90220-4

    authors: Leinbach SS,Casto JF,Pickett TK

    更新日期:1984-09-01 00:00:00

  • Efficient translation of mRNAs in influenza A virus-infected cells is independent of the viral 5' untranslated region.

    abstract::We test the hypothesis that the translation machinery in cells infected by influenza A virus efficiently translates only mRNAs that possess the influenza viral 5' untranslated region (5'-UTR) by introducing mRNAs directly into the cytoplasm of infected cells. This strategy avoids effects due to the inhibition of the n...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1006/viro.2001.1149

    authors: Cassetti MC,Noah DL,Montelione GT,Krug RM

    更新日期:2001-10-25 00:00:00

  • Epitopes of the G1 glycoprotein of La Crosse virus form overlapping clusters within a single antigenic site.

    abstract::Antigenic sites on the G1 glycoprotein of La Crosse bunyavirus were defined by constructing a panel of neutralizing and nonneutralizing monoclonal antibodies (F. Gonzalez-Scarano, R. E. Shope, C. H. Calisher, and N. Nathanson (1982), Virology 120, 42-53). To analyze the relationship between the individual epitopes del...

    journal_title:Virology

    pub_type: 杂志文章

    doi:10.1016/0042-6822(85)90283-1

    authors: Najjar JA,Gentsch JR,Nathanson N,Gonzalez-Scarano F

    更新日期:1985-07-30 00:00:00