Iterative image reconstruction using inverse fourier rebinning for fully 3-D PET.

Abstract:

:We describe a fast forward and back projector pair based on inverse Fourier rebinning for use in iterative image reconstruction for fully three-dimensional (3-D) positron emission tomography (PET). The projector pair is used as part of a factored system matrix that takes into account detector-pair response by using shift-variant sinogram blur kernels, thereby combining the computational advantages of Fourier rebinning with iterative reconstruction using accurate system models. The forward projector consists of a two-dimensional (2-D) projector, which maps 3-D images into 2-D direct sinograms, followed by exact inverse rebinning which maps the 2-D into fully 3-D sinograms. The back projector is implemented as the transpose of the forward projector and differs from the true exact rebinning operator in the sense that it does not require reprojection to compute missing line of responses (LORs). We compensate for two types of inaccuracies that arise in a cylindrical PET scanner when using inverse Fourier rebinning: 1) nonuniform radial sampling and 2) nonconstant oblique angles in the radial direction in a single oblique sinogram. We examine the effects of these corrections on sinogram accuracy and reconstructed image quality. We evaluate performance of the new projector pair for maximum a posteriori (MAP) reconstruction of simulated and in vivo data. The new projector results in only a small loss in resolution towards the edge of the field-of-view when compared to the fully 3-D geometric projector and requires an order of magnitude less computation.

journal_name

IEEE Trans Med Imaging

authors

Cho S,Li Q,Ahn S,Bai B,Leahy RM

subject

Has Abstract

pub_date

2007-03-01 00:00:00

pages

347-58

issue

3

eissn

0278-0062

issn

1558-254X

journal_volume

26

pub_type

杂志文章
  • Globally convergent image reconstruction for emission tomography using relaxed ordered subsets algorithms.

    abstract::We present two types of globally convergent relaxed ordered subsets (OS) algorithms for penalized-likelihood image reconstruction in emission tomography: modified block sequential regularized expectation-maximization (BSREM) and relaxed OS separable paraboloidal surrogates (OS-SPS). The global convergence proof of the...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2003.812251

    authors: Ahn S,Fessler JA

    更新日期:2003-05-01 00:00:00

  • A Predictive Model of Vertebral Trabecular Anisotropy From Ex Vivo Micro-CT.

    abstract::Spine-related disorders are amongst the most frequently encountered problems in clinical medicine. For several applications such as 1) to improve the assessment of the strength of the spine, as well as 2) to optimize the personalization of spinal interventions, image-based biomechanical modeling of the vertebrae is ex...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2014.2387114

    authors: Lekadir K,Hoogendoorn C,Hazrati-Marangalou J,Taylor Z,Noble C,van Rietbergen B,Frangi AF

    更新日期:2015-08-01 00:00:00

  • Parameterization-invariant shape comparisons of anatomical surfaces.

    abstract::We consider 3-D brain structures as continuous parameterized surfaces and present a metric for their comparisons that is invariant to the way they are parameterized. Past comparisons of such surfaces involve either volume deformations or nonrigid matching under fixed parameterizations of surfaces. We propose a new mat...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2010.2099130

    authors: Kurtek S,Klassen E,Ding Z,Jacobson SW,Jacobson JL,Avison MJ,Srivastava A

    更新日期:2011-03-01 00:00:00

  • Authors' reply.

    abstract::The comment of Stig Steenstrup on the use of gray level entropy function in our paper' has been addressed. The entropy measure has not been used in the procedure of enhancement, but it has only been used to show statistically that the enhanced images have larger gray level entropy, and therefore better utilize the gra...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.1987.4307802

    authors: Dhawan AP,Gordon R

    更新日期:1987-01-01 00:00:00

  • REDMAPS: reduced-dimensionality matching for prostate brachytherapy seed reconstruction.

    abstract::The success of prostate brachytherapy critically depends on delivering adequate dose to the prostate gland. Intraoperative localization of the implanted seeds provides potential for dose evaluation and optimization during therapy. A reduced-dimensionality matching algorithm for prostate brachytherapy seed reconstructi...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2010.2059709

    authors: Lee J,Labat C,Jain AK,Song DY,Burdette EC,Fichtinger G,Prince JL

    更新日期:2011-01-01 00:00:00

  • Automatic Segmentation and Quantification of White and Brown Adipose Tissues from PET/CT Scans.

    abstract::In this paper, we investigate the automatic detection of white and brown adipose tissues using Positron Emission Tomography/Computed Tomography (PET/CT) scans, and develop methods for the quantification of these tissues at the whole-body and body-region levels. We propose a patient-specific automatic adiposity analysi...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2016.2636188

    authors: Hussein S,Green A,Watane A,Reiter D,Chen X,Papadakis GZ,Wood B,Cypess A,Osman M,Bagci U

    更新日期:2017-03-01 00:00:00

  • The n-PI-method for helical cone-beam CT.

    abstract::A new class of acquisition schemes for helical cone-beam computed tomography (CB-CT) scanning is introduced, and their effect on the reconstruction methods is analyzed. These acquisition schemes are based on a new detector shape that is bounded by the helix. It will be shown that the data acquired with these schemes a...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.887834

    authors: Proksa R,Köhler T,Grass M,Timmer J

    更新日期:2000-09-01 00:00:00

  • Comments on "A new algorithm for border description of polarized light surface microscopic images of pigmented skin lesions".

    abstract::In this paper, discrepancies and reference inaccuracies in the paper (Grana et al., 2003) are pointed out. Specifically, it is demonstrated that the definitions of "lesion gradient" and "skin lesion gradient," widely used in a number of medical papers on computer analysis of pigmented skin lesions, are unambiguous, an...

    journal_title:IEEE transactions on medical imaging

    pub_type: 评论,信件

    doi:10.1109/tmi.2006.884205

    authors: Burroni M,Alparone L,Argenti F

    更新日期:2006-12-01 00:00:00

  • Self-Supervised Feature Learning via Exploiting Multi-Modal Data for Retinal Disease Diagnosis.

    abstract::The automatic diagnosis of various retinal diseases from fundus images is important to support clinical decision-making. However, developing such automatic solutions is challenging due to the requirement of a large amount of human-annotated data. Recently, unsupervised/self-supervised feature learning techniques recei...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2020.3008871

    authors: Li X,Jia M,Islam MT,Yu L,Xing L

    更新日期:2020-12-01 00:00:00

  • Sparse reconstruction of the magnetic particle imaging system matrix.

    abstract::Magnetic particle imaging allows to determine the spatial distribution of magnetic nanoparticles in vivo. The system matrix in magnetic particle imaging is commonly acquired in a tedious calibration scan and requires to measure the system response at numerous positions in the field-of-view. In this paper, we propose a...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2013.2258029

    authors: Knopp T,Weber A

    更新日期:2013-08-01 00:00:00

  • Estimating kinetic parameter maps from dynamic contrast-enhanced MRI using spatial prior knowledge.

    abstract::Dynamic contrast-enhanced magnetic resonance (DCE-MR) imaging can be used to study microvascular structure in vivo by monitoring the abundance of an injected diffusible contrast agent over time. The resulting spatially resolved intensity-time curves are usually interpreted in terms of kinetic parameters obtained by fi...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2009.2019957

    authors: Kelm BM,Menze BH,Nix O,Zechmann CM,Hamprecht FA

    更新日期:2009-10-01 00:00:00

  • Robust simultaneous detection of coronary borders in complex images.

    abstract::Visual estimation of coronary obstruction severity from angiograms suffers from poor inter- and intraobserver reproducibility and is often inaccurate. In spite of the widely recognized limitations of visual analysis, automated methods have not found widespread clinical use, in part because they too frequently fail to ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.370412

    authors: Sonka M,Winniford MD,Collins SM

    更新日期:1995-01-01 00:00:00

  • Prediction based collaborative trackers (PCT): a robust and accurate approach toward 3D medical object tracking.

    abstract::Robust and fast 3D tracking of deformable objects, such as heart, is a challenging task because of the relatively low image contrast and speed requirement. Many existing 2D algorithms might not be directly applied on the 3D tracking problem. The 3D tracking performance is limited due to dramatically increased data siz...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2011.2158440

    authors: Yang L,Georgescu B,Zheng Y,Wang Y,Meer P,Comaniciu D

    更新日期:2011-11-01 00:00:00

  • A Krasnoselskii-Mann Algorithm With an Improved EM Preconditioner for PET Image Reconstruction.

    abstract::This paper presents a preconditioned Krasnoselskii-Mann (KM) algorithm with an improved EM preconditioner (IEM-PKMA) for higher-order total variation (HOTV) regularized positron emission tomography (PET) image reconstruction. The PET reconstruction problem can be formulated as a three-term convex optimization model co...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2019.2898271

    authors: Lin Y,Schmidtlein CR,Li Q,Li S,Xu Y

    更新日期:2019-09-01 00:00:00

  • Collimator optimization for detection and quantitation tasks: application to gallium-67 imaging.

    abstract::We describe a new approach to the problem of collimator optimization in nuclear medicine; our methodology is illustrated for the challenging case of gallium-67 imaging. Collimator-design methods based on empirical rules, such as specification of an allowable level of single-septal penetration (SSP) at a fixed energy, ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2005.857211

    authors: Moore SC,Foley Kijewski M,El Fakhri G

    更新日期:2005-10-01 00:00:00

  • Solving the Bloch equation with periodic excitation using harmonic balancing: application to Rabi modulated excitation.

    abstract::In waveform design for magnetic resonance applications, periodic continuous-wave excitation offers potential advantages that remain largely unexplored because of a lack of understanding of the Bloch equation with periodic continuous-wave excitations. Using harmonic balancing techniques the steady state solutions of th...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2015.2423313

    authors: Tahayori B,Johnston LA,Layton KJ,Farrell PM,Mareels IM

    更新日期:2015-10-01 00:00:00

  • Computer-assisted scan protocol and reconstruction (CASPAR)-reduction of image noise and patient dose.

    abstract::X-ray computed tomography is a powerful medical imaging device. It allows high-resolution 3-D visualization of the human body. However, one drawback is the health risk associated with ionizing radiation. Simply downscaling the radiation intensities over the entire scan results in increased quantum noise. This paper pr...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2009.2034515

    authors: Sperl J,Beque D,Claus B,De Man B,Senzig B,Brokate M

    更新日期:2010-03-01 00:00:00

  • Ex Vivo and In Vivo Monitoring and Characterization of Thermal Lesions by High-Intensity Focused Ultrasound and Microwave Ablation Using Ultrasonic Nakagami Imaging.

    abstract::The feasibility of ultrasonic Nakagami imaging to evaluate thermal lesions by high-intensity focused ultrasound and microwave ablation was explored in ex vivo and in vivo liver models. Dynamic changes of the ultrasonic Nakagami parameter in thermal lesions were calculated, and ultrasonic B-mode and Nakagami images wer...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2018.2829934

    authors: Zhang S,Shang S,Han Y,Gu C,Wu S,Liu S,Niu G,Bouakaz A,Wan M

    更新日期:2018-07-01 00:00:00

  • Unsupervised MR-to-CT Synthesis Using Structure-Constrained CycleGAN.

    abstract::Synthesizing a CT image from an available MR image has recently emerged as a key goal in radiotherapy treatment planning for cancer patients. CycleGANs have achieved promising results on unsupervised MR-to-CT image synthesis; however, because they have no direct constraints between input and synthetic images, cycleGAN...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2020.3015379

    authors: Yang H,Sun J,Carass A,Zhao C,Lee J,Prince JL,Xu Z

    更新日期:2020-12-01 00:00:00

  • Resampling of data between arbitrary grids using convolution interpolation.

    abstract::For certain medical applications resampling of data is required. In magnetic resonance tomography (MRT) or computer tomography (CT), e.g., data may be sampled on nonrectilinear grids in the Fourier domain. For the image reconstruction a convolution-interpolation algorithm, often called gridding, can be applied for res...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.774166

    authors: Rasche V,Proksa R,Sinkus R,Börnert P,Eggers H

    更新日期:1999-05-01 00:00:00

  • Microwave image reconstruction utilizing log-magnitude and unwrapped phase to improve high-contrast object recovery.

    abstract::Reconstructing images of large high-contrast objects with microwave methods has proved difficult. Successful images have generally been obtained by using a priori information to constrain the image reconstruction to recover the correct electromagnetic property distribution. In these situations, the measured electric f...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.913177

    authors: Meaney PM,Paulsen KD,Pogue BW,Miga MI

    更新日期:2001-02-01 00:00:00

  • Tracking pylorus in ultrasonic image sequences with edge-based optical flow.

    abstract::Tracking pylorus in ultrasonic image sequences is an important step in the analysis of duodenogastric reflux (DGR). We propose a joint prediction and segmentation method (JPS) which combines optical flow with active contour to track pylorus. The goal of the proposed method is to improve the pyloric tracking accuracy b...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2012.2183884

    authors: Chen C,Wang Y,Yu J,Zhou Z,Shen L,Chen Y

    更新日期:2012-03-01 00:00:00

  • Statistical distributions of DCT coefficients and their application to an interframe compression algorithm for 3-D medical images.

    abstract::Displacement estimated interframe (DEI) coding, a coding scheme for 3-D medical image data sets such as X-ray computed tomography (CT) or magnetic resonance (MR) images, is presented. To take advantage of the correlation between contiguous slices, a displacement-compensated difference image based on the previous image...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.241875

    authors: Lee H,Kim Y,Rowberg AH,Riskin EA

    更新日期:1993-01-01 00:00:00

  • Automatic recovery of the optic nervehead geometry in optical coherence tomography.

    abstract::Optical coherence tomography (OCT) uses retroreflected light to provide micrometer-resolution, cross-sectional scans of biological tissues. OCT's first application was in ophthalmic imaging where it has proven particularly useful in diagnosing, monitoring, and studying glaucoma. Diagnosing glaucoma is difficult and it...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2006.871417

    authors: Boyer KL,Herzog A,Roberts C

    更新日期:2006-05-01 00:00:00

  • Spherical harmonics microwave algorithm for shape and location reconstruction of breast cancer tumor.

    abstract::A reconstruction algorithm to simultaneously estimate the shape and location of three-dimensional breast cancer tumor is presented and its utility is analyzed. The approach is based on a spherical harmonic decomposition to capture the shape of the tumor. We combine a gradient descent optimization method with a direct ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/tmi.2006.881377

    authors: El-Shenawee M,Miller EL

    更新日期:2006-10-01 00:00:00

  • Computer Aided Theragnosis Using Quantitative Ultrasound Spectroscopy and Maximum Mean Discrepancy in Locally Advanced Breast Cancer.

    abstract::A noninvasive computer-aided-theragnosis (CAT) system was developed for the early therapeutic cancer response assessment in patients with locally advanced breast cancer (LABC) treated with neoadjuvant chemotherapy. The proposed CAT system was based on multi-parametric quantitative ultrasound (QUS) spectroscopic method...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2015.2495246

    authors: Gangeh MJ,Tadayyon H,Sannachi L,Sadeghi-Naini A,Tran WT,Czarnota GJ

    更新日期:2016-03-01 00:00:00

  • Progressive coding and transmission of digital diagnostic pictures.

    abstract::In radiology, as a result of the increased utilization of digital imaging modalities, such as computed tomography (CT) and magnetic resonance imaging (MRI), over a third of the images produced in a typical radiology department are currently in digital form, and this percentage is steadily increasing. Image compression...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.1986.4307750

    authors: Elnahas SE,Tzou KH,Cox JR,Hill RL,Jost R

    更新日期:1986-01-01 00:00:00

  • Spherical Deformable U-Net: Application to Cortical Surface Parcellation and Development Prediction.

    abstract::Convolutional Neural Networks (CNNs) have achieved overwhelming success in learning-related problems for 2D/3D images in the Euclidean space. However, unlike in the Euclidean space, the shapes of many structures in medical imaging have an inherent spherical topology in a manifold space, e.g., the convoluted brain cort...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/TMI.2021.3050072

    authors: Zhao F,Wu Z,Wang L,Lin W,Gilmore JH,Xia S,Shen D,Li G

    更新日期:2021-01-08 00:00:00

  • Selection of a convolution function for Fourier inversion using gridding [computerised tomography application].

    abstract::In the technique known as gridding, the data samples are weighted for sampling density and convolved with a finite kernel, then resampled on a grid preparatory to a fast Fourier transform. The authors compare the artifact introduced into the image for various convolving functions of different sizes, including the Kais...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.97598

    authors: Jackson JI,Meyer CH,Nishimura DG,Macovski A

    更新日期:1991-01-01 00:00:00

  • Four-dimensional spectral-spatial imaging using projection reconstruction.

    abstract::An n-dimensional (n-D) filtered backprojection image reconstruction algorithm has been developed and used in the reconstruction of 4-D spectral-spatial magnetic resonance imaging (MRI) data. The algorithm uses n-1 successive stages of 2-D filtered backprojection to reconstruct an n-D image. This approach results in a ...

    journal_title:IEEE transactions on medical imaging

    pub_type: 杂志文章

    doi:10.1109/42.387718

    authors: Hyslop WB,Woods RK,Lauterbur PC

    更新日期:1995-01-01 00:00:00