Application of an electric DNA-chip for the expression analysis of bioprocess-relevant marker genes of Bacillus subtilis.

Abstract:

:The knowledge of critical process-relevant genes can be used for an improved control of bioprocesses. So far bioprocess-relevant marker genes can be analyzed by established expression analysis methods only off-line. In this study, an alternative approach for a potential at-line monitoring of gene expression during bioprocesses is suggested. This approach is based on the measurement of specific mRNAs on an electric DNA-chip in connection with a magnetic bead-based sandwich hybridization. In order to allow an at-line measurement of specific mRNAs an improved method for a fast and partially automated isolation of high quality-RNA samples was developed. The expression analysis of the electric DNA-chip was compared with optical DNA micro arrays and the real time RT-PCR for three selected process-relevant genes of Bacillus subtilis. We demonstrate that the mRNA analysis by means of the electric DNA-chip gives similar results compared to the micro array analysis and the real time RT-PCR technique.

journal_name

Biotechnol Bioeng

authors

Jürgen B,Barken KB,Tobisch S,Pioch D,Wümpelmann M,Hecker M,Schweder T

doi

10.1002/bit.20578

subject

Has Abstract

pub_date

2005-11-05 00:00:00

pages

299-307

issue

3

eissn

0006-3592

issn

1097-0290

journal_volume

92

pub_type

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