Activator-induced conformational change in general transcription factor TFIIB.

Abstract:

:Transcriptional activator proteins (activators) function, at least in part, by increasing preinitiation complex assembly (for reviews see refs 1-4). Previous studies have shown that an acidic activator forms a contact with the general transcription factor TFIIB (refs 5-7) and recruits it into the preinitiation complex. Mutational studies indicate that this interaction between the acidic activator and TFIIB is required for transcriptional stimulation. We show here that the acidic activator-TFIIB interaction has an additional function in preinitiation complex assembly. We provide evidence that in native TFIIB the amino- and carboxy-terminal domains are engaged in an intramolecular interaction. The acidic activator disrupts this intramolecular interaction to expose binding sites for general transcription factors that enter the preinitiation complex through association with TFIIB. Thus, the acidic activator induces a conformational change in TFIIB that drives preinitiation complex assembly forward.

journal_name

Nature

journal_title

Nature

authors

Roberts SG,Green MR

doi

10.1038/371717a0

subject

Has Abstract

pub_date

1994-10-20 00:00:00

pages

717-20

issue

6499

eissn

0028-0836

issn

1476-4687

journal_volume

371

pub_type

杂志文章

相关文献

NATURE文献大全
  • The structural basis of lipopolysaccharide recognition by the TLR4-MD-2 complex.

    abstract::The lipopolysaccharide (LPS) of Gram negative bacteria is a well-known inducer of the innate immune response. Toll-like receptor (TLR) 4 and myeloid differentiation factor 2 (MD-2) form a heterodimer that recognizes a common 'pattern' in structurally diverse LPS molecules. To understand the ligand specificity and rece...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature07830

    authors: Park BS,Song DH,Kim HM,Choi BS,Lee H,Lee JO

    更新日期:2009-04-30 00:00:00

  • High-resolution tunnelling spectroscopy of a graphene quartet.

    abstract::Electrons in a single sheet of graphene behave quite differently from those in traditional two-dimensional electron systems. Like massless relativistic particles, they have linear dispersion and chiral eigenstates. Furthermore, two sets of electrons centred at different points in reciprocal space ('valleys') have this...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature09330

    authors: Song YJ,Otte AF,Kuk Y,Hu Y,Torrance DB,First PN,de Heer WA,Min H,Adam S,Stiles MD,MacDonald AH,Stroscio JA

    更新日期:2010-09-09 00:00:00

  • TGFβ attenuates tumour response to PD-L1 blockade by contributing to exclusion of T cells.

    abstract::Therapeutic antibodies that block the programmed death-1 (PD-1)-programmed death-ligand 1 (PD-L1) pathway can induce robust and durable responses in patients with various cancers, including metastatic urothelial cancer. However, these responses only occur in a subset of patients. Elucidating the determinants of respon...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature25501

    authors: Mariathasan S,Turley SJ,Nickles D,Castiglioni A,Yuen K,Wang Y,Kadel EE III,Koeppen H,Astarita JL,Cubas R,Jhunjhunwala S,Banchereau R,Yang Y,Guan Y,Chalouni C,Ziai J,Şenbabaoğlu Y,Santoro S,Sheinson D,Hung J,Giltna

    更新日期:2018-02-22 00:00:00

  • Alu sequences are processed 7SL RNA genes.

    abstract::7SL RNA is an abundant cytoplasmic RNA which functions in protein secretion as a component of the signal recognition particle. Alu sequences are the most abundant family of human and rodent middle repetitive DNA sequences (reviewed in ref. 2). The primary structure of human 7SL RNA consists of an Alu sequence interrup...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/312171a0

    authors: Ullu E,Tschudi C

    更新日期:1984-11-08 00:00:00

  • Defining the functions of trans-SNARE pairs.

    abstract::The homotypic fusion of yeast vacuoles includes a 'docking' step, which we show here to consist of two sequential reactions: a reversible 'tethering' mediated by the GTPase Ypt7, and 'SNARE pairing', in which SNARE proteins from opposite membranes form a complex in trans. The function of this trans-SNARE complex must ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/25069

    authors: Ungermann C,Sato K,Wickner W

    更新日期:1998-12-10 00:00:00

  • GAL4-VP16 is an unusually potent transcriptional activator.

    abstract::Recent work has defined a class of transcriptional activators, members of which activate transcription in yeast, plant, insect and mammalian cells. These proteins contain two parts: one directs DNA binding and the other, called the activating region, presumably interacts with some component of the transcriptional mach...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/335563a0

    authors: Sadowski I,Ma J,Triezenberg S,Ptashne M

    更新日期:1988-10-06 00:00:00

  • Chiral selection in poly(C)-directed synthesis of oligo(G).

    abstract::Theories of the origin of optical asymmetry in living systems place fundamental importance on the amplification of optical asymmetry by an autocatalytic process. The replication of a polynucleotide is one obvious choice for such an autocatalytic growth mechanism. If an optically homogeneous polynucleotide could replic...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/310602a0

    authors: Joyce GF,Visser GM,van Boeckel CA,van Boom JH,Orgel LE,van Westrenen J

    更新日期:1984-08-16 00:00:00

  • Susceptibility to murine lymphocytic choriomeningitis maps to class I MHC genes--a model for MHC/disease associations.

    abstract::Susceptibility to some human diseases is linked, albeit weakly, to major transplantation antigens (HLA) encoded by the major histocompatibility gene complex (MHC). Here we have studied MHC/disease association in inbred strains of mice after intracerebral (i.c.) injection of lymphocytic choriomeningitis virus (LCMV). T...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/316814a0

    authors: Zinkernagel RM,Pfau CJ,Hengartner H,Althage A

    更新日期:1985-08-29 00:00:00

  • Association of the T-cell regulatory gene CTLA4 with susceptibility to autoimmune disease.

    abstract::Genes and mechanisms involved in common complex diseases, such as the autoimmune disorders that affect approximately 5% of the population, remain obscure. Here we identify polymorphisms of the cytotoxic T lymphocyte antigen 4 gene (CTLA4)--which encodes a vital negative regulatory molecule of the immune system--as can...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature01621

    authors: Ueda H,Howson JM,Esposito L,Heward J,Snook H,Chamberlain G,Rainbow DB,Hunter KM,Smith AN,Di Genova G,Herr MH,Dahlman I,Payne F,Smyth D,Lowe C,Twells RC,Howlett S,Healy B,Nutland S,Rance HE,Everett V,Smink LJ,L

    更新日期:2003-05-29 00:00:00

  • Mimicking the alloantigenicity of proteins with chemically synthesized peptides differing in single amino acids.

    abstract::Recent studies have shown that short chemically synthesized peptides very often induce antibodies which react with the cognate sequence in the intact folded protein. Since such antibodies react with known regions of proteins, they are of predetermined specificity and offer a precision not previously possible with immu...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/306697a0

    authors: Alexander H,Johnson DA,Rosen J,Jerabek L,Green N,Weissman IL,Lerner RA

    更新日期:1983-12-15 00:00:00

  • Importance of FSH-releasing protein and inhibin in erythrodifferentiation.

    abstract::Inhibin is a hypophysiotropic hormone which selectively suppresses the secretion of pituitary follicle-stimulating hormone. It has been isolated from gonadal fluids and characterized as a protein heterodimer consisting of an alpha subunit and one of two beta subunits (beta A or beta B). FSH-releasing protein (FRP), al...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/330765a0

    authors: Yu J,Shao LE,Lemas V,Yu AL,Vaughan J,Rivier J,Vale W

    更新日期:1987-12-24 00:00:00

  • Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.

    abstract::The 30S ribosomal subunit binds messenger RNA and the anticodon stem-loop of transfer RNA during protein synthesis. A crystallographic analysis of the structure of the subunit from the bacterium Thermus thermophilus is presented. At a resolution of 5.5 A, the phosphate backbone of the ribosomal RNA is visible, as are ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/23631

    authors: Clemons WM Jr,May JL,Wimberly BT,McCutcheon JP,Capel MS,Ramakrishnan V

    更新日期:1999-08-26 00:00:00

  • BACH2 represses effector programs to stabilize T(reg)-mediated immune homeostasis.

    abstract::Through their functional diversification, distinct lineages of CD4(+) T cells can act to either drive or constrain immune-mediated pathology. Transcription factors are critical in the generation of cellular diversity, and negative regulators antagonistic to alternate fates often act in conjunction with positive regula...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature12199

    authors: Roychoudhuri R,Hirahara K,Mousavi K,Clever D,Klebanoff CA,Bonelli M,Sciumè G,Zare H,Vahedi G,Dema B,Yu Z,Liu H,Takahashi H,Rao M,Muranski P,Crompton JG,Punkosdy G,Bedognetti D,Wang E,Hoffmann V,Rivera J,Marincol

    更新日期:2013-06-27 00:00:00

  • Dopamine D2 receptors in discrimination learning and spine enlargement.

    abstract::Dopamine D2 receptors (D2Rs) are densely expressed in the striatum and have been linked to neuropsychiatric disorders such as schizophrenia1,2. High-affinity binding of dopamine suggests that D2Rs detect transient reductions in dopamine concentration (the dopamine dip) during punishment learning3-5. However, the natur...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/s41586-020-2115-1

    authors: Iino Y,Sawada T,Yamaguchi K,Tajiri M,Ishii S,Kasai H,Yagishita S

    更新日期:2020-03-01 00:00:00

  • Possible relationship of morphogenesis in pathogenic fungus, Histoplasma capsulatum, to heat shock response.

    abstract::Histoplasma capsulatum, like many other fungal pathogens, is dimorphic: it exists as mycelia in the soil and yeast in animal hosts. Because only the yeast phase is parasitic, factors which affect morphogenesis have been of interest for understanding and controlling pathogenicity. In culture, the mycelial to yeast tran...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/303806a0

    authors: Lambowitz AM,Kobayashi GS,Painter A,Medoff G

    更新日期:1983-06-30 00:00:00

  • An intermediate-mass black hole of over 500 solar masses in the galaxy ESO 243-49.

    abstract::Ultraluminous X-ray sources are extragalactic objects located outside the nucleus of the host galaxy with bolometric luminosities exceeding 10(39) erg s(-1). These extreme luminosities-if the emission is isotropic and below the theoretical (Eddington) limit, where the radiation pressure is balanced by the gravitationa...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature08083

    authors: Farrell SA,Webb NA,Barret D,Godet O,Rodrigues JM

    更新日期:2009-07-02 00:00:00

  • The ultimate speed of magnetic switching in granular recording media.

    abstract::In magnetic memory devices, logical bits are recorded by selectively setting the magnetization vector of individual magnetic domains either 'up' or 'down'. In such devices, the fastest and most efficient recording method involves precessional switching: when a magnetic field B(p) is applied as a write pulse over a per...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature02438

    authors: Tudosa I,Stamm C,Kashuba AB,King F,Siegmann HC,Stöhr J,Ju G,Lu B,Weller D

    更新日期:2004-04-22 00:00:00

  • Dynamics and number of trans-SNARE complexes determine nascent fusion pore properties.

    abstract::The fusion pore is the first crucial intermediate formed during exocytosis, yet little is known about the mechanisms that determine the size and kinetic properties of these transient structures. Here, we reduced the number of available SNAREs (proteins that mediate vesicle fusion) in neurons and observed changes in tr...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature25481

    authors: Bao H,Das D,Courtney NA,Jiang Y,Briguglio JS,Lou X,Roston D,Cui Q,Chanda B,Chapman ER

    更新日期:2018-02-08 00:00:00

  • Simple mathematical models with very complicated dynamics.

    abstract::First-order difference equations arise in many contexts in the biological, economic and social sciences. Such equations, even though simple and deterministic, can exhibit a surprising array of dynamical behaviour, from stable points, to a bifurcating hiearchy of stable cycles, to apparently random fluctuations. There ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/261459a0

    authors: May RM

    更新日期:1976-06-10 00:00:00

  • Epigenetic silencing of tumour suppressor gene p15 by its antisense RNA.

    abstract::Tumour suppressor genes (TSGs) inhibiting normal cellular growth are frequently silenced epigenetically in cancer. DNA methylation is commonly associated with TSG silencing, yet mutations in the DNA methylation initiation and recognition machinery in carcinogenesis are unknown. An intriguing possible mechanism for gen...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature06468

    authors: Yu W,Gius D,Onyango P,Muldoon-Jacobs K,Karp J,Feinberg AP,Cui H

    更新日期:2008-01-10 00:00:00

  • Chromosomally unstable mouse tumours have genomic alterations similar to diverse human cancers.

    abstract::Highly rearranged and mutated cancer genomes present major challenges in the identification of pathogenetic events driving the neoplastic transformation process. Here we engineered lymphoma-prone mice with chromosomal instability to assess the usefulness of mouse models in cancer gene discovery and the extent of cross...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature05886

    authors: Maser RS,Choudhury B,Campbell PJ,Feng B,Wong KK,Protopopov A,O'Neil J,Gutierrez A,Ivanova E,Perna I,Lin E,Mani V,Jiang S,McNamara K,Zaghlul S,Edkins S,Stevens C,Brennan C,Martin ES,Wiedemeyer R,Kabbarah O,Noguei

    更新日期:2007-06-21 00:00:00

  • Agonist-bound structure of the human P2Y12 receptor.

    abstract::The P2Y12 receptor (P2Y12R), one of eight members of the P2YR family expressed in humans, is one of the most prominent clinical drug targets for inhibition of platelet aggregation. Although mutagenesis and modelling studies of the P2Y12R provided useful insights into ligand binding, the agonist and antagonist recognit...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature13288

    authors: Zhang J,Zhang K,Gao ZG,Paoletta S,Zhang D,Han GW,Li T,Ma L,Zhang W,Müller CE,Yang H,Jiang H,Cherezov V,Katritch V,Jacobson KA,Stevens RC,Wu B,Zhao Q

    更新日期:2014-05-01 00:00:00

  • Metastasis-suppressor transcript destabilization through TARBP2 binding of mRNA hairpins.

    abstract::Aberrant regulation of RNA stability has an important role in many disease states. Deregulated post-transcriptional modulation, such as that governed by microRNAs targeting linear sequence elements in messenger RNAs, has been implicated in the progression of many cancer types. A defining feature of RNA is its ability ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature13466

    authors: Goodarzi H,Zhang S,Buss CG,Fish L,Tavazoie S,Tavazoie SF

    更新日期:2014-09-11 00:00:00

  • Transient increase in obese gene expression after food intake or insulin administration.

    abstract::Obesity is a disorder of energy balance, indicating a chronic disequilibrium between energy intake and expenditure. Recently, the mouse ob gene, and subsequently its human and rat homologues, have been cloned. The ob gene product, leptin, is expressed exclusively in adipose tissue, and appears to be a signalling facto...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/377527a0

    authors: Saladin R,De Vos P,Guerre-Millo M,Leturque A,Girard J,Staels B,Auwerx J

    更新日期:1995-10-12 00:00:00

  • Early Pleistocene enamel proteome from Dmanisi resolves Stephanorhinus phylogeny.

    abstract::The sequencing of ancient DNA has enabled the reconstruction of speciation, migration and admixture events for extinct taxa1. However, the irreversible post-mortem degradation2 of ancient DNA has so far limited its recovery-outside permafrost areas-to specimens that are not older than approximately 0.5 million years (...

    journal_title:Nature

    pub_type: 历史文章,杂志文章

    doi:10.1038/s41586-019-1555-y

    authors: Cappellini E,Welker F,Pandolfi L,Ramos-Madrigal J,Samodova D,Rüther PL,Fotakis AK,Lyon D,Moreno-Mayar JV,Bukhsianidze M,Rakownikow Jersie-Christensen R,Mackie M,Ginolhac A,Ferring R,Tappen M,Palkopoulou E,Dickinson MR,S

    更新日期:2019-10-01 00:00:00

  • Palaeomagnetism of the Vredefort meteorite crater and implications for craters on Mars.

    abstract::Magnetic surveys of the martian surface have revealed significantly lower magnetic field intensities over the gigantic impact craters Hellas and Argyre than over surrounding regions. The reduced fields are commonly attributed to pressure demagnetization caused by shock waves generated during meteorite impact, in the a...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature03560

    authors: Carporzen L,Gilder SA,Hart RJ

    更新日期:2005-05-12 00:00:00

  • Formation of beta-amyloid protein deposits in brains of transgenic mice.

    abstract::Deposits of beta-amyloid are one of the main pathological characteristics of Alzheimer's disease. The beta-amyloid peptide constituent (relative molecular mass 4,200) of the deposits is derived from the beta-amyloid precursor protein (beta-APP) which is expressed in several different isoforms. The two most prevalent b...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/352239a0

    authors: Quon D,Wang Y,Catalano R,Scardina JM,Murakami K,Cordell B

    更新日期:1991-07-18 00:00:00

  • Intestinal crypt homeostasis revealed at single-stem-cell level by in vivo live imaging.

    abstract::The rapid turnover of the mammalian intestinal epithelium is supported by stem cells located around the base of the crypt. In addition to the Lgr5 marker, intestinal stem cells have been associated with other markers that are expressed heterogeneously within the crypt base region. Previous quantitative clonal fate ana...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature12972

    authors: Ritsma L,Ellenbroek SIJ,Zomer A,Snippert HJ,de Sauvage FJ,Simons BD,Clevers H,van Rheenen J

    更新日期:2014-03-20 00:00:00

  • Specific inhibition of chromatin-associated poly(A) synthesis in vitro by cordycepin 5'-triphosphate.

    abstract::It has been established that many eukaryotic mRNAs contain poly(adenylic acid) tracts at their 3'-termini. The polyadenylation of mRNA occurs post-transcriptionally in the nucleus as a rapid, initial addition of 100-200 adenylate residues to the pre-mRNA (ref. 1). Subsequently, a slower chain extension (6-8 bases) of ...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/267178a0

    authors: Rose KM,Bell LE,Jacob ST

    更新日期:1977-05-12 00:00:00

  • Genome sequencing and analysis of the model grass Brachypodium distachyon.

    abstract::Three subfamilies of grasses, the Ehrhartoideae, Panicoideae and Pooideae, provide the bulk of human nutrition and are poised to become major sources of renewable energy. Here we describe the genome sequence of the wild grass Brachypodium distachyon (Brachypodium), which is, to our knowledge, the first member of the P...

    journal_title:Nature

    pub_type: 杂志文章

    doi:10.1038/nature08747

    authors: International Brachypodium Initiative.

    更新日期:2010-02-11 00:00:00