Estimations of bacterial growth rates in natural waters.

Abstract:

:Specific growth rates as low as 0.005 hr(-1) (generation times of 20 to 200 hr) of aquatic bacteria in natural waters have been calculated from significant differences between dilution rates and washout rates in a chemostat. The measured growth rates were affected by the treatment of the water samples (type of sterilization) and by competition with the natural microflora for the unknown growth-limiting substrate.

journal_name

J Bacteriol

journal_title

Journal of bacteriology

authors

Jannasch HW

doi

10.1128/JB.99.1.156-160.1969

subject

Has Abstract

pub_date

1969-07-01 00:00:00

pages

156-60

issue

1

eissn

0021-9193

issn

1098-5530

journal_volume

99

pub_type

杂志文章
  • A DNA-binding peroxiredoxin of Coxiella burnetii is involved in countering oxidative stress during exponential-phase growth.

    abstract::Coxiella burnetii is a Gram-negative, obligate intracellular bacterial pathogen that resides within the harsh, acidic confines of a lysosome-like compartment of the host cell that is termed a parasitophorous vacuole. In this study, we characterized a thiol-specific peroxidase of C. burnetii that belongs to the atypica...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.01324-09

    authors: Hicks LD,Raghavan R,Battisti JM,Minnick MF

    更新日期:2010-04-01 00:00:00

  • New antibiotic substance produced by Salmonella typhimurium LT2.

    abstract::Salmonella typhimurium LT2 excreted under certain conditions an antibiotic substance designated typhimuricin. It is suggested that the LT2 "cryptic" plasmid is involved in its production and in the immunity to it. Preliminary characterization of typhimuricin is presented. ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:

    authors: Ben-Gurion R,Flashner Y

    更新日期:1982-10-01 00:00:00

  • Role of Escherichia coli DNA polymerase I in conferring viability upon the dnaN159 mutant strain.

    abstract::The Escherichia coli dnaN159 allele encodes a mutant form of the beta-sliding clamp (beta159) that is impaired for interaction with the replicative DNA polymerase (Pol), Pol III. In addition, strains bearing the dnaN159 allele require functional Pol I for viability. We have utilized a combination of genetic and bioche...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.00476-07

    authors: Maul RW,Sanders LH,Lim JB,Benitez R,Sutton MD

    更新日期:2007-07-01 00:00:00

  • Draft genome sequences for two metal-reducing Pelosinus fermentans strains isolated from a Cr(VI)-contaminated site and for type strain R7.

    abstract::Pelosinus fermentans 16S rRNA gene sequences have been reported from diverse geographical sites since the recent isolation of the type strain. We present the genome sequence of the P. fermentans type strain R7 (DSM 17108) and genome sequences for two new strains with different abilities to reduce iron, chromate, and u...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.01174-12

    authors: Brown SD,Podar M,Klingeman DM,Johnson CM,Yang ZK,Utturkar SM,Land ML,Mosher JJ,Hurt RA Jr,Phelps TJ,Palumbo AV,Arkin AP,Hazen TC,Elias DA

    更新日期:2012-09-01 00:00:00

  • Electron microscope and autoradiographic study of ultrastructural aspects of competence and deoxyribonucleic acid absorption in Bacillus subtilis: ultrastructure of competent and noncompetent cells and cellular changes during development of competence.

    abstract::By means of electron microscope autoradiography of component cultures of Bacillus subtilis exposed to [(3)H]thymidine-labeled transforming deoxyribonucleic acid competent and noncompetent cells can be distinguished. Competence is not limited to a specific phase of the cell division cycle. With serial section electron ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.118.2.334-341.1974

    authors: Vermeulen CA,Venema G

    更新日期:1974-05-01 00:00:00

  • Topological model of the Rhodobacter capsulatus light-harvesting complex I assembly protein LhaA (previously known as ORF1696).

    abstract::A theoretical topology of the Rhodobacter capsulatus membrane protein LhaA was formulated and evaluated by gene fusion experiments. The apparent topological locations of fusion enzymes were compared with the theoretically derived structure, and a model of LhaA is suggested that consists of 12 transmembrane segments, w...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.180.17.4742-4745.1998

    authors: Young CS,Beatty JT

    更新日期:1998-09-01 00:00:00

  • Divergence in nitrogenases of Azoarcus spp., Proteobacteria of the beta subclass.

    abstract::Nitrogenase is a functionally constant protein catalyzing N2 reduction, which is found in many phylogenetic lineages of Archaea and Bacteria. A phylogenetic analysis of nif genes may provide insights into the evolution of the bacterial genomes. Moreover, it may be used to study diazotrophic communities, when classical...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.179.13.4172-4178.1997

    authors: Hurek T,Egener T,Reinhold-Hurek B

    更新日期:1997-07-01 00:00:00

  • Structure and arrangement of flagella in species of the genus Beneckea and Photobacterium fischeri.

    abstract::Species of marine bacteria belonging to the genus Beneckea and strains of Photobacterium fischeri were negatively stained and examined by means of the electron microscope to determine the structure and arrangement of their flagella. All of the species of the genus Beneckea had single, polar, sheathed flagella when gro...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.107.1.295-302.1971

    authors: Allen RD,Baumann P

    更新日期:1971-07-01 00:00:00

  • Characteristics of cold-sensitive mutants of Escherichia coli K-12 defective in deoxyribonucleic acid replication.

    abstract::Four cold-sensitive mutants of Escherichia coli have been isolated which show a reduced ability to synthesize deoxyribonucleic acid at low temperature. The mutants also have a reduced ability to incorporate nucleoside triphosphates into deoxyribonucleic acid at low temperature in cell preparations made permeable with ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.121.1.99-107.1975

    authors: Wehr CT,Waskell L,Glaser DA

    更新日期:1975-01-01 00:00:00

  • Genes of the sbo-alb locus of Bacillus subtilis are required for production of the antilisterial bacteriocin subtilosin.

    abstract::Bacillus subtilis JH642 and a wild strain of B. subtilis called 22a both produce an antilisterial peptide that can be purified by anion-exchange and gel filtration chromatography. Amino acid analysis confirmed that the substance was the cyclic bacteriocin subtilosin. A mutant defective in production of the substance w...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.181.23.7346-7355.1999

    authors: Zheng G,Yan LZ,Vederas JC,Zuber P

    更新日期:1999-12-01 00:00:00

  • Genetic organization and mRNA expression of enolase genes of Candida albicans.

    abstract::In previous work, we cloned a Candida albicans cDNA for the glycolytic enzyme enolase and found a single, abundant enolase transcript on Northern (RNA) blots and a single protein on immunoblots, using antiserum raised against a recombinant enolase fusion protein. Because C. albicans enolase is abundantly produced duri...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.177.7.1772-1779.1995

    authors: Postlethwait P,Sundstrom P

    更新日期:1995-04-01 00:00:00

  • Extent of host deletions associated with bacteriophage P2-mediated eduction.

    abstract::A series of independent Escherichia coli K eductants has been isolated and tested to determine the extent of their deletions. The deletions cover the P2 prophage in location H, the his operon, a suppressor of the recBC phenotype (sbcB), the gene for gluconate-6-phosphate dehydrogenase (gnd), a locus involved in cell w...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.108.2.695-704.1971

    authors: Sunshine MG,Kelly B

    更新日期:1971-11-01 00:00:00

  • Identification of a regulator that controls stationary-phase expression of catalase-peroxidase in Caulobacter crescentus.

    abstract::Expression of the catalase-peroxidase of Caulobacter crescentus, a gram-negative member of the alpha subdivision of the Proteobacteria, is 50-fold higher in stationary-phase cultures than in exponential cultures. To identify regulators of the starvation response, Tn5 insertion mutants were isolated with reduced expres...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.181.19.6152-6159.1999

    authors: Rava PS,Somma L,Steinman HM

    更新日期:1999-10-01 00:00:00

  • TPW22, a lactococcal temperate phage with a site-specific integrase closely related to Streptococcus thermophilus phage integrases.

    abstract::The temperate phage TPW22, induced from Lactococcus lactis subsp. cremoris W22, and the evolutionarily interesting integrase of this phage were characterized. Phage TPW22 was propagated lytically on L. lactis subsp. cremoris 3107, which could also be lysogenized by site-specific integration. The attachment site (attP)...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.181.22.7034-7042.1999

    authors: Petersen A,Josephsen J,Johnsen MG

    更新日期:1999-11-01 00:00:00

  • Rgg regulates growth phase-dependent expression of proteins associated with secondary metabolism and stress in Streptococcus pyogenes.

    abstract::The transcriptional regulatory protein Rgg coordinates amino acid catabolism and virulence factor expression in Streptococcus pyogenes. We used a proteomic approach to compare cytoplasmic proteins isolated from S. pyogenes wild-type strain NZ131 (serotype M49) to proteins isolated from an rgg mutant strain during the ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.186.21.7091-7099.2004

    authors: Chaussee MA,Callegari EA,Chaussee MS

    更新日期:2004-11-01 00:00:00

  • Activators of the glutamate-dependent acid resistance system alleviate deleterious effects of YidC depletion in Escherichia coli.

    abstract::The function of the essential inner membrane protein (IMP) YidC in Escherichia coli has been studied for a limited number of model IMPs and primarily using targeted approaches. These studies suggested that YidC acts at the level of insertion, folding, and quality control of IMPs, both in the context of the Sec translo...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.01209-10

    authors: Yu Z,Bekker M,Tramonti A,Cook GM,van Ulsen P,Scheffers DJ,de Mattos JT,De Biase D,Luirink J

    更新日期:2011-03-01 00:00:00

  • Inositol-limited growth, repair, and translocation in an inositol-requiring mutant of Neurospora crassa.

    abstract::The biochemical consequences of inositol limitation in an inositol auxotroph of Neurospora crassa have been examined as a means of disclosing the cellular role of inositol. The cellular levels of inositol in the inl mutant were proportional to the concentration of inositol in the growth medium whereas inositol phospha...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.143.1.18-26.1980

    authors: Hanson BA

    更新日期:1980-07-01 00:00:00

  • Impact of the N-terminal secretor domain on YopD translocator function in Yersinia pseudotuberculosis type III secretion.

    abstract::Type III secretion systems (T3SSs) secrete needle components, pore-forming translocators, and the translocated effectors. In part, effector recognition by a T3SS involves their N-terminal amino acids and their 5' mRNA. To investigate whether similar molecular constraints influence translocator secretion, we scrutinize...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.00210-11

    authors: Amer AA,Åhlund MK,Bröms JE,Forsberg Å,Francis MS

    更新日期:2011-12-01 00:00:00

  • Multiple genes for membrane-bound phosphatases in Escherichia coli and their action on phospholipid precursors.

    abstract::We have devised a coupled radiochemical assay for detecting phosphatidylglycerolphosphate (PGP) phosphatase activity in Escherichia coli colonies immobilized on filter paper. There appeared to be at least two enzymes capable of dephosphorylating PGP, as judged by the characterization of mutations in two genes designat...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.153.2.722-730.1983

    authors: Icho T,Raetz CR

    更新日期:1983-02-01 00:00:00

  • Roles for the Rhodobacter sphaeroides CcmA and CcmG proteins.

    abstract::Rhodobacter sphaeroides cells containing an in-frame deletion within ccmA lack detectable soluble and membrane-bound c-type cytochromes and are unable to grow under conditions where these proteins are required. Only strains merodiploid for ccmABCDG were found after attempting to generate cells containing either a ccmG...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.183.15.4643-4647.2001

    authors: Cox RL,Patterson C,Donohue TJ

    更新日期:2001-08-01 00:00:00

  • Isolation, cloning, mapping, and nucleotide sequencing of the gene encoding flavodoxin in Escherichia coli.

    abstract::The flavodoxins constitute a highly conserved family of small, acidic electron transfer proteins with flavin mononucleotide prosthetic groups. They are found in prokaryotes and in red and green algae, where they provide electrons at low potentials for the reduction of nitrogen by nitrogenase, for the light-dependent r...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.173.5.1729-1737.1991

    authors: Osborne C,Chen LM,Matthews RG

    更新日期:1991-03-01 00:00:00

  • Identification of a third nuclear protein-coding gene required specifically for posttranscriptional expression of the mitochondrial COX3 gene is Saccharomyces cerevisiae.

    abstract::A third nuclear protein-coding gene termed PET122 has been shown to be required for a post-transcriptional step in expression of the mitochondrial COX3 gene is Saccharomyces cerevisiae. pet122 mutants fail to produce cytochrome c oxidase subunit III, which is the polypeptide product of the COX3 gene, but produce norma...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.170.3.1399-1402.1988

    authors: Kloeckener-Gruissem B,McEwen JE,Poyton RO

    更新日期:1988-03-01 00:00:00

  • Degradation of 3-phenylbutyric acid by Pseudomonas sp.

    abstract::Pseudomonas sp. isolated by selective culture with 3-phenylbutyrate (3-PB) as the sole carbon source metabolized the compound through two different pathways by initial oxidation of the benzene ring and by initial oxidation of the side chain. During early exponential growth, a catechol substance identified as 3-(2,3-di...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:

    authors: Sariaslani FS,Sudmeier JL,Focht DD

    更新日期:1982-10-01 00:00:00

  • Whole-genome shotgun sequencing of Lactobacillus rhamnosus MTCC 5462, a strain with probiotic potential.

    abstract::Lactobacillus rhamnosus MTCC 5462 was isolated from infant gastrointestinal flora. The strain exhibited an ability to reduce cholesterol and stimulate immunity. The strain has exhibited positive results in alleviating gastrointestinal discomfort and good potential as a probiotic. We sequenced the whole genome of the s...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.06644-11

    authors: Prajapati JB,Khedkar CD,Chitra J,Suja S,Mishra V,Sreeja V,Patel RK,Ahir VB,Bhatt VD,Sajnani MR,Jakhesara SJ,Koringa PG,Joshi CG

    更新日期:2012-03-01 00:00:00

  • A 53-base-pair inverted repeat negatively regulates expression of the adjacent and divergently oriented cytochrome P450(BM-1) gene and its regulatory gene, bm1P1, in Bacillus megaterium.

    abstract::To study the role of the cis-acting element(s) in controlling the expression of the cytochrome P450(BM-1) gene and its upstream regulatory gene, bm1P1, in Bacillus megaterium, various deletion derivatives were constructed. A 53-bp inverted repeat located midway between the P450(BM-1) gene and bm1P1 gene was found in v...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.179.1.280-283.1997

    authors: Shaw GC,Sung CC,Liu CH,Kao HS

    更新日期:1997-01-01 00:00:00

  • Use of polymyxin B, levallorphan, and tetracaine to isolate novel envelope mutants of Escherichia coli.

    abstract::Mutants of Escherichia coli were isolated by their resistance to the bacteriocidal effects of the membrane-active drugs polymyxin B, levallorphan, and tetracaine. The mutants were examined for additional changes in cellular physiology evoked by the lesions; many polymyxin-resistant strains had a concomitant increased ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.127.2.961-972.1976

    authors: Dame JB,Shapiro BM

    更新日期:1976-08-01 00:00:00

  • Staphylococcal penicillinase. I. Inhibition and stimulation of activity.

    abstract::Saz, Arthur K. (National Institute of Allergy and Infectious Diseases, Bethesda, Md.), Dolores L. Lowery, and Leah J. Jackson. Staphylococcal penicillinase. I. Inhibition and stimulation of activity. J. Bacteriol. 82:298-304. 1961.-The penicillinase extracted from a penicillin-resistant strain of Staphylococcus aureus...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.82.2.298-304.1961

    authors: SAZ AK,LOWERY DL,JACKSON LJ

    更新日期:1961-08-01 00:00:00

  • Construction and characterization of amplifiable multicopy DNA cloning vehicles derived from the P15A cryptic miniplasmid.

    abstract::Construction and characterization of a class of multicopy plasmid cloning vehicles containing the replication system of miniplasmid P15A are described. The constructed plasmids have cleavage sites within antibiotic resistance genes for a variety of commonly employed site-specific endonucleases, permitting convenient u...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.134.3.1141-1156.1978

    authors: Chang AC,Cohen SN

    更新日期:1978-06-01 00:00:00

  • Catabolic thiosulfate disproportionation and carbon dioxide reduction in strain DCB-1, a reductively dechlorinating anaerobe.

    abstract::Strain DCB-1 is a strict anaerobe capable of reductive dehalogenation. We elucidated metabolic processes in DCB-1 which may be related to dehalogenation and which further characterize the organism physiologically. Sulfoxy anions and CO2 were used by DCB-1 as catabolic electron acceptors. With suitable electron donors,...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/jb.172.4.2065-2070.1990

    authors: Mohn WW,Tiedje JM

    更新日期:1990-04-01 00:00:00

  • Lysine decarboxylase mutants of Escherichia coli: evidence for two enzyme forms.

    abstract::Mutants with reduced lysine decarboxylase activity were isolated from an Escherichia coli polyamine auxotroph. These mutants could not produce induced enzyme, showing only a very low level of an apparently constitutive form. Both enzyme forms could be demonstrated in the parental strain. ...

    journal_title:Journal of bacteriology

    pub_type: 杂志文章

    doi:10.1128/JB.141.3.1428-1431.1980

    authors: Goldemberg SH

    更新日期:1980-03-01 00:00:00