Rhythmic glucose metabolism regulates the redox circadian clockwork in human red blood cells.

Abstract:

:Circadian clocks coordinate mammalian behavior and physiology enabling organisms to anticipate 24-hour cycles. Transcription-translation feedback loops are thought to drive these clocks in most of mammalian cells. However, red blood cells (RBCs), which do not contain a nucleus, and cannot perform transcription or translation, nonetheless exhibit circadian redox rhythms. Here we show human RBCs display circadian regulation of glucose metabolism, which is required to sustain daily redox oscillations. We found daily rhythms of metabolite levels and flux through glycolysis and the pentose phosphate pathway (PPP). We show that inhibition of critical enzymes in either pathway abolished 24-hour rhythms in metabolic flux and redox oscillations, and determined that metabolic oscillations are necessary for redox rhythmicity. Furthermore, metabolic flux rhythms also occur in nucleated cells, and persist when the core transcriptional circadian clockwork is absent in Bmal1 knockouts. Thus, we propose that rhythmic glucose metabolism is an integral process in circadian rhythms.

journal_name

Nat Commun

journal_title

Nature communications

authors

Ch R,Rey G,Ray S,Jha PK,Driscoll PC,Dos Santos MS,Malik DM,Lach R,Weljie AM,MacRae JI,Valekunja UK,Reddy AB

doi

10.1038/s41467-020-20479-4

subject

Has Abstract

pub_date

2021-01-15 00:00:00

pages

377

issue

1

issn

2041-1723

pii

10.1038/s41467-020-20479-4

journal_volume

12

pub_type

杂志文章
  • Mps1 kinase-dependent Sgo2 centromere localisation mediates cohesin protection in mouse oocyte meiosis I.

    abstract::A key feature of meiosis is the step-wise removal of cohesin, the protein complex holding sister chromatids together, first from arms in meiosis I and then from the centromere region in meiosis II. Centromeric cohesin is protected by Sgo2 from Separase-mediated cleavage, in order to maintain sister chromatids together...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-017-00774-3

    authors: El Yakoubi W,Buffin E,Cladière D,Gryaznova Y,Berenguer I,Touati SA,Gómez R,Suja JA,van Deursen JM,Wassmann K

    更新日期:2017-09-25 00:00:00

  • Inflammation-induced proteolytic processing of the SIRPα cytoplasmic ITIM in neutrophils propagates a proinflammatory state.

    abstract::Signal regulatory protein α (SIRPα), an immunoreceptor tyrosine-based inhibitory motif (ITIM)-containing receptor, is an essential negative regulator of leukocyte inflammatory responses. Here we report that SIRPα cytoplasmic signalling ITIMs in neutrophils are cleaved during active inflammation and that the loss of SI...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms3436

    authors: Zen K,Guo Y,Bian Z,Lv Z,Zhu D,Ohnishi H,Matozaki T,Liu Y

    更新日期:2013-01-01 00:00:00

  • Griffithsin carrageenan fast dissolving inserts prevent SHIV HSV-2 and HPV infections in vivo.

    abstract::Human immunodeficiency virus (HIV) pre-exposure prophylaxis (PrEP) strategies with proven in vivo efficacy rely on antiretroviral drugs, creating the potential for drug resistance and complicated treatment options in individuals who become infected. Moreover, on-demand products are currently missing from the PrEP deve...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-06349-0

    authors: Derby N,Lal M,Aravantinou M,Kizima L,Barnable P,Rodriguez A,Lai M,Wesenberg A,Ugaonkar S,Levendosky K,Mizenina O,Kleinbeck K,Lifson JD,Peet MM,Lloyd Z,Benson M,Heneine W,O'Keefe BR,Robbiani M,Martinelli E,Grasperg

    更新日期:2018-09-24 00:00:00

  • Human hypocretin and melanin-concentrating hormone levels are linked to emotion and social interaction.

    abstract::The neurochemical changes underlying human emotions and social behaviour are largely unknown. Here we report on the changes in the levels of two hypothalamic neuropeptides, hypocretin-1 and melanin-concentrating hormone, measured in the human amygdala. We show that hypocretin-1 levels are maximal during positive emoti...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms2461

    authors: Blouin AM,Fried I,Wilson CL,Staba RJ,Behnke EJ,Lam HA,Maidment NT,Karlsson KÆ,Lapierre JL,Siegel JM

    更新日期:2013-01-01 00:00:00

  • A mechanistic model of tau amyloid aggregation based on direct observation of oligomers.

    abstract::Protein aggregation plays a key role in neurodegenerative disease, giving rise to small oligomers that may become cytotoxic to cells. The fundamental microscopic reactions taking place during aggregation, and their rate constants, have been difficult to determine due to lack of suitable methods to identify and follow ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms8025

    authors: Shammas SL,Garcia GA,Kumar S,Kjaergaard M,Horrocks MH,Shivji N,Mandelkow E,Knowles TP,Mandelkow E,Klenerman D

    更新日期:2015-04-30 00:00:00

  • Bimolecular recombination in methylammonium lead triiodide perovskite is an inverse absorption process.

    abstract::Photovoltaic devices based on metal halide perovskites are rapidly improving in efficiency. Once the Shockley-Queisser limit is reached, charge-carrier extraction will be limited only by radiative bimolecular recombination of electrons with holes. Yet, this fundamental process, and its link with material stoichiometry...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-017-02670-2

    authors: Davies CL,Filip MR,Patel JB,Crothers TW,Verdi C,Wright AD,Milot RL,Giustino F,Johnston MB,Herz LM

    更新日期:2018-01-18 00:00:00

  • Loss of the E3 ubiquitin ligase MKRN1 represses diet-induced metabolic syndrome through AMPK activation.

    abstract::AMP-activated protein kinase (AMPK) plays a key role in controlling energy metabolism in response to physiological and nutritional status. Although AMPK activation has been proposed as a promising molecular target for treating obesity and its related comorbidities, the use of pharmacological AMPK activators has been m...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-05721-4

    authors: Lee MS,Han HJ,Han SY,Kim IY,Chae S,Lee CS,Kim SE,Yoon SG,Park JW,Kim JH,Shin S,Jeong M,Ko A,Lee HY,Oh KJ,Lee YH,Bae KH,Koo SH,Kim JW,Seong JK,Hwang D,Song J

    更新日期:2018-08-24 00:00:00

  • Docking sites inside Cas9 for adenine base editing diversification and RNA off-target elimination.

    abstract::Base editing tools with diversified editing scopes and minimized RNA off-target activities are required for broad applications. Nevertheless, current Streptococcus pyogenes Cas9 (SpCas9)-based adenine base editors (ABEs) with minimized RNA off-target activities display constrained editing scopes with efficient editing...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-19730-9

    authors: Li S,Yuan B,Cao J,Chen J,Chen J,Qiu J,Zhao XM,Wang X,Qiu Z,Cheng TL

    更新日期:2020-11-17 00:00:00

  • A unified neurocognitive model of semantics language social behaviour and face recognition in semantic dementia.

    abstract::The anterior temporal lobes (ATL) have become a key brain region of interest in cognitive neuroscience founded upon neuropsychological investigations of semantic dementia (SD). The purposes of this investigation are to generate a single unified model that captures the known cognitive-behavioural variations in SD and m...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-16089-9

    authors: Ding J,Chen K,Liu H,Huang L,Chen Y,Lv Y,Yang Q,Guo Q,Han Z,Lambon Ralph MA

    更新日期:2020-05-22 00:00:00

  • Quantifying the polygenic contribution to variable expressivity in eleven rare genetic disorders.

    abstract::Rare genetic disorders (RGDs) often exhibit significant clinical variability among affected individuals, a disease characteristic termed variable expressivity. Recently, the aggregate effect of common variation, quantified as polygenic scores (PGSs), has emerged as an effective tool for predictions of disease risk and...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-12869-0

    authors: Oetjens MT,Kelly MA,Sturm AC,Martin CL,Ledbetter DH

    更新日期:2019-10-25 00:00:00

  • Nanomechanics of individual aerographite tetrapods.

    abstract::Carbon-based three-dimensional aerographite networks, built from interconnected hollow tubular tetrapods of multilayer graphene, are ultra-lightweight materials recently discovered and ideal for advanced multifunctional applications. In order to predict the bulk mechanical behaviour of networks it is very important to...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms14982

    authors: Meija R,Signetti S,Schuchardt A,Meurisch K,Smazna D,Mecklenburg M,Schulte K,Erts D,Lupan O,Fiedler B,Mishra YK,Adelung R,Pugno NM

    更新日期:2017-04-12 00:00:00

  • Coupling artificial molecular spin states by photon-assisted tunnelling.

    abstract::Artificial molecules containing just one or two electrons provide a powerful platform for studies of orbital and spin quantum dynamics in nanoscale devices. A well-known example of these dynamics is tunnelling of electrons between two coupled quantum dots triggered by mi...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms1561

    authors: Schreiber LR,Braakman FR,Meunier T,Calado V,Danon J,Taylor JM,Wegscheider W,Vandersypen LM

    更新日期:2011-11-22 00:00:00

  • BRE/BRCC45 regulates CDC25A stability by recruiting USP7 in response to DNA damage.

    abstract::BRCA2 is essential for maintaining genomic integrity. BRCA2-deficient primary cells are either not viable or exhibit severe proliferation defects. Yet, BRCA2 deficiency contributes to tumorigenesis. It is believed that mutations in genes such as TRP53 allow BRCA2 heterozygous cells to overcome growth arrest when they ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-03020-6

    authors: Biswas K,Philip S,Yadav A,Martin BK,Burkett S,Singh V,Babbar A,North SL,Chang S,Sharan SK

    更新日期:2018-02-07 00:00:00

  • miR-142-5p and miR-130a-3p are regulated by IL-4 and IL-13 and control profibrogenic macrophage program.

    abstract::Macrophages play a pivotal role in tissue fibrogenesis, which underlies the pathogenesis of many end-stage chronic inflammatory diseases. MicroRNAs are key regulators of immune cell functions, but their roles in macrophage's fibrogenesis have not been characterized. Here we show that IL-4 and IL-13 induce miR-142-5p a...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms9523

    authors: Su S,Zhao Q,He C,Huang D,Liu J,Chen F,Chen J,Liao JY,Cui X,Zeng Y,Yao H,Su F,Liu Q,Jiang S,Song E

    更新日期:2015-10-05 00:00:00

  • Targeting cell surface TLR7 for therapeutic intervention in autoimmune diseases.

    abstract::Toll-like receptor 7 (TLR7) senses microbial-derived RNA but can also potentially respond to self-derived RNA. To prevent autoimmune responses, TLR7 is thought to localize in endolysosomes. Contrary to this view, we show here that TLR7 is present on the cell surface of immune cells and that TLR7 responses can be inhib...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms7119

    authors: Kanno A,Tanimura N,Ishizaki M,Ohko K,Motoi Y,Onji M,Fukui R,Shimozato T,Yamamoto K,Shibata T,Sano S,Sugahara-Tobinai A,Takai T,Ohto U,Shimizu T,Saitoh S,Miyake K

    更新日期:2015-02-04 00:00:00

  • Using apelin-based synthetic Notch receptors to detect angiogenesis and treat solid tumors.

    abstract::Angiogenesis is a necessary process for solid tumor growth. Cellular markers for endothelial cell proliferation are potential targets for identifying the vasculature of tumors in homeostasis. Here we customize the behaviors of engineered cells to recognize Apj, a surface marker of the neovascular endothelium, using sy...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-15729-4

    authors: Wang Z,Wang F,Zhong J,Zhu T,Zheng Y,Zhao T,Xie Q,Ma F,Li R,Tang Q,Xu F,Tian X,Zhu J

    更新日期:2020-05-01 00:00:00

  • Neglecting uncertainties biases house-elevation decisions to manage riverine flood risks.

    abstract::Homeowners around the world elevate houses to manage flood risks. Deciding how high to elevate a house poses a nontrivial decision problem. The U.S. Federal Emergency Management Agency (FEMA) recommends elevating existing houses to the Base Flood Elevation (the elevation of the 100-year flood) plus a freeboard. This r...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-19188-9

    authors: Zarekarizi M,Srikrishnan V,Keller K

    更新日期:2020-10-26 00:00:00

  • No extension of quantum theory can have improved predictive power.

    abstract::According to quantum theory, measurements generate random outcomes, in stark contrast with classical mechanics. This raises the question of whether there could exist an extension of the theory that removes this indeterminism, as suspected by Einstein, Podolsky and Rosen. Although this has been shown to be impossible, ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms1416

    authors: Colbeck R,Renner R

    更新日期:2011-08-02 00:00:00

  • Using the president's tweets to understand political diversion in the age of social media.

    abstract::Social media has arguably shifted political agenda-setting power away from mainstream media onto politicians. Current U.S. President Trump's reliance on Twitter is unprecedented, but the underlying implications for agenda setting are poorly understood. Using the president as a case study, we present evidence suggestin...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-19644-6

    authors: Lewandowsky S,Jetter M,Ecker UKH

    更新日期:2020-11-10 00:00:00

  • MAP4K3 mediates amino acid-dependent regulation of autophagy via phosphorylation of TFEB.

    abstract::Autophagy is the major cellular pathway by which macromolecules are degraded, and amino acid depletion powerfully activates autophagy. MAP4K3, or germinal-center kinase-like kinase, is required for robust cell growth in response to amino acids, but the basis for MAP4K3 regulation of cellular metabolic disposition rema...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-03340-7

    authors: Hsu CL,Lee EX,Gordon KL,Paz EA,Shen WC,Ohnishi K,Meisenhelder J,Hunter T,La Spada AR

    更新日期:2018-03-05 00:00:00

  • On quantum gravity tests with composite particles.

    abstract::Models of quantum gravity imply a fundamental revision of our description of position and momentum that manifests in modifications of the canonical commutation relations. Experimental tests of such modifications remain an outstanding challenge. These corrections scale with the mass of test particles, which motivates e...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-17518-5

    authors: Kumar SP,Plenio MB

    更新日期:2020-08-06 00:00:00

  • PNPLA1 has a crucial role in skin barrier function by directing acylceramide biosynthesis.

    abstract::Mutations in patatin-like phospholipase domain-containing 1 (PNPLA1) cause autosomal recessive congenital ichthyosis, but the mechanism involved remains unclear. Here we show that PNPLA1, an enzyme expressed in differentiated keratinocytes, plays a crucial role in the biosynthesis of ω-O-acylceramide, a lipid componen...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms14609

    authors: Hirabayashi T,Anjo T,Kaneko A,Senoo Y,Shibata A,Takama H,Yokoyama K,Nishito Y,Ono T,Taya C,Muramatsu K,Fukami K,Muñoz-Garcia A,Brash AR,Ikeda K,Arita M,Akiyama M,Murakami M

    更新日期:2017-03-01 00:00:00

  • KMT2D/MLL2 inactivation is associated with recurrence in adult-type granulosa cell tumors of the ovary.

    abstract::Adult-type granulosa cell tumors of the ovary (aGCTs) are rare gynecologic malignancies that exhibit a high frequency of somatic FOXL2 c.C402G (p.Cys134Trp) mutation. Treatment of relapsed aGCT remains a significant clinical challenge. Here we show, using whole-exome and cancer gene panel sequencing of 79 aGCTs from t...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-018-04950-x

    authors: Hillman RT,Celestino J,Terranova C,Beird HC,Gumbs C,Little L,Nguyen T,Thornton R,Tippen S,Zhang J,Lu KH,Gershenson DM,Rai K,Broaddus RR,Futreal PA

    更新日期:2018-06-27 00:00:00

  • Digital quantum simulation of fermionic models with a superconducting circuit.

    abstract::One of the key applications of quantum information is simulating nature. Fermions are ubiquitous in nature, appearing in condensed matter systems, chemistry and high energy physics. However, universally simulating their interactions is arguably one of the largest challenges, because of the difficulties arising from an...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms8654

    authors: Barends R,Lamata L,Kelly J,García-Álvarez L,Fowler AG,Megrant A,Jeffrey E,White TC,Sank D,Mutus JY,Campbell B,Chen Y,Chen Z,Chiaro B,Dunsworth A,Hoi IC,Neill C,O'Malley PJ,Quintana C,Roushan P,Vainsencher A,Wenn

    更新日期:2015-07-08 00:00:00

  • Elucidation of the biosynthesis of carnosic acid and its reconstitution in yeast.

    abstract::Rosemary extracts containing the phenolic diterpenes carnosic acid and its derivative carnosol are approved food additives used in an increasingly wide range of products to enhance shelf-life, thanks to their high anti-oxidant activity. We describe here the elucidation of the complete biosynthetic pathway of carnosic ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms12942

    authors: Scheler U,Brandt W,Porzel A,Rothe K,Manzano D,Božić D,Papaefthimiou D,Balcke GU,Henning A,Lohse S,Marillonnet S,Kanellis AK,Ferrer A,Tissier A

    更新日期:2016-10-05 00:00:00

  • Mapping tenascin-C interaction with toll-like receptor 4 reveals a new subset of endogenous inflammatory triggers.

    abstract::Pattern recognition underpins innate immunity; the accurate identification of danger, including infection, injury, or tumor, is key to an appropriately targeted immune response. Pathogen detection is increasingly well defined mechanistically, but the discrimination of endogenous inflammatory triggers remains unclear. ...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-017-01718-7

    authors: Zuliani-Alvarez L,Marzeda AM,Deligne C,Schwenzer A,McCann FE,Marsden BD,Piccinini AM,Midwood KS

    更新日期:2017-11-17 00:00:00

  • Gingival solitary chemosensory cells are immune sentinels for periodontitis.

    abstract::Solitary chemosensory cells (SCCs) are epithelial sentinels that utilize bitter Tas2r receptors and coupled taste transduction elements to detect pathogenic bacterial metabolites, triggering host defenses to control the infection. Here we report that SCCs are present in mouse gingival junctional epithelium, where they...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-019-12505-x

    authors: Zheng X,Tizzano M,Redding K,He J,Peng X,Jiang P,Xu X,Zhou X,Margolskee RF

    更新日期:2019-10-03 00:00:00

  • Demonstration of a quantum error detection code using a square lattice of four superconducting qubits.

    abstract::The ability to detect and deal with errors when manipulating quantum systems is a fundamental requirement for fault-tolerant quantum computing. Unlike classical bits that are subject to only digital bit-flip errors, quantum bits are susceptible to a much larger spectrum of errors, for which any complete quantum error-...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/ncomms7979

    authors: Córcoles AD,Magesan E,Srinivasan SJ,Cross AW,Steffen M,Gambetta JM,Chow JM

    更新日期:2015-04-29 00:00:00

  • The X-linked trichothiodystrophy-causing gene RNF113A links the spliceosome to cell survival upon DNA damage.

    abstract::Prolonged cell survival occurs through the expression of specific protein isoforms generated by alternate splicing of mRNA precursors in cancer cells. How alternate splicing regulates tumor development and resistance to targeted therapies in cancer remain poorly understood. Here we show that RNF113A, whose loss-of-fun...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-020-15003-7

    authors: Shostak K,Jiang Z,Charloteaux B,Mayer A,Habraken Y,Tharun L,Klein S,Xu X,Duong HQ,Vislovukh A,Close P,Florin A,Rambow F,Marine JC,Büttner R,Chariot A

    更新日期:2020-03-09 00:00:00

  • Induced cortical tension restores functional junctions in adhesion-defective carcinoma cells.

    abstract::Normal epithelial cells are stably connected to each other via the apical junctional complex (AJC). AJCs, however, tend to be disrupted during tumor progression, and this process is implicated in cancer dissemination. Here, using colon carcinoma cells that fail to form AJCs, we investigated molecular defects behind th...

    journal_title:Nature communications

    pub_type: 杂志文章

    doi:10.1038/s41467-017-01945-y

    authors: Ito S,Okuda S,Abe M,Fujimoto M,Onuki T,Nishimura T,Takeichi M

    更新日期:2017-11-28 00:00:00