Genome-wide characterization and expression analysis suggested diverse functions of the mechanosensitive channel of small conductance-like (MSL) genes in cereal crops.

Abstract:

:Mechanosensitive ion channels are pore-forming transmembrane proteins that allow ions to move down their electrochemical gradient in response to mechanical stimuli. They participate in many plant developmental processes including the maintenance of plastid shape, pollen tube growth, etc. Herein, a total of 11, 10, 6, 30, 9, and 8 MSL genes were identified in Aegilops tauschii, Hordeum vulgare, Sorghum bicolor, Triticum aestivum, Triticum urartu, and Zea mays, respectively. These genes were located on various chromosomes of their respective cereal, while MSLs of T. urartu were found on scaffolds. The phylogenetic analysis, subcellular localization, and sequence homology suggested clustering of MSLs into two classes. These genes consisted of cis-regulatory elements related to growth and development, responsive to light, hormone, and stress. Differential expression of various MSL genes in tissue developmental stages and stress conditions revealed their precise role in development and stress responses. Altered expression during CaCl2 stress suggested their role in Ca2+ homeostasis and signaling. The co-expression analysis suggested their interactions with other genes involved in growth, defense responses etc. A comparative expression profiling of paralogous genes revealed either retention of function or pseudo-functionalization. The present study unfolded various characteristics of MSLs in cereals, which will facilitate their in-depth functional characterization in future studies.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Kaur A,Taneja M,Tyagi S,Sharma A,Singh K,Upadhyay SK

doi

10.1038/s41598-020-73627-7

subject

Has Abstract

pub_date

2020-10-06 00:00:00

pages

16583

issue

1

issn

2045-2322

pii

10.1038/s41598-020-73627-7

journal_volume

10

pub_type

杂志文章
  • Enhancing nanoparticle-based visible detection by controlling the extent of aggregation.

    abstract::Visible indication based on the aggregation of colloidal nanoparticles (NPs) is highly advantageous for rapid on-site detection of biological entities, which even untrained persons can perform without specialized instrumentation. However, since the extent of aggregation should exceed a certain minimum threshold to pro...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep00456

    authors: Lim S,Koo OK,You YS,Lee YE,Kim MS,Chang PS,Kang DH,Yu JH,Choi YJ,Gunasekaran S

    更新日期:2012-01-01 00:00:00

  • Sporulation-specific cell division defects in ylmE mutants of Streptomyces coelicolor are rescued by additional deletion of ylmD.

    abstract::Cell division during the reproductive phase of the Streptomyces life-cycle requires tight coordination between synchronous formation of multiple septa and DNA segregation. One remarkable difference with most other bacterial systems is that cell division in Streptomyces is positively controlled by the recruitment of Ft...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-25782-1

    authors: Zhang L,Willemse J,Hoskisson PA,van Wezel GP

    更新日期:2018-05-09 00:00:00

  • Serum Wisteria Floribunda Agglutinin-Positive Sialylated Mucin 1 as a Marker of Progenitor/Biliary Features in Hepatocellular Carcinoma.

    abstract::Histological molecular classification of hepatocellular carcinoma (HCC) is clinically important for predicting the prognosis. However, a reliable serum marker has not been established. The aim of this study was to evaluate the diagnostic value of serum Wisteria Floribunda agglutinin-positive sialylated mucin 1 (WFA-si...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-00357-8

    authors: Tamaki N,Kuno A,Matsuda A,Tsujikawa H,Yamazaki K,Yasui Y,Tsuchiya K,Nakanishi H,Itakura J,Korenaga M,Mizokami M,Kurosaki M,Sakamoto M,Narimatsu H,Izumi N

    更新日期:2017-03-21 00:00:00

  • The Solar Spectrum in the Atacama Desert.

    abstract::The Atacama Desert has been pointed out as one of the places on earth where the highest surface irradiance may occur. This area is characterized by its high altitude, prevalent cloudless conditions and relatively low columns of ozone and water vapor. Aimed at the characterization of the solar spectrum in the Atacama D...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep22457

    authors: Cordero RR,Damiani A,Seckmeyer G,Jorquera J,Caballero M,Rowe P,Ferrer J,Mubarak R,Carrasco J,Rondanelli R,Matus M,Laroze D

    更新日期:2016-03-02 00:00:00

  • Author Correction: Common neural value representations of hedonic and utilitarian products in the ventral striatum: An fMRI study.

    abstract::An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-020-58293-z

    authors: Motoki K,Sugiura M,Kawashima R

    更新日期:2020-01-24 00:00:00

  • Effects of temperature and photosynthetically active radiation on virioplankton decay in the western Pacific Ocean.

    abstract::In this study, we investigated virioplankton decay rates and their responses to changes in temperature and photosynthetically active radiation (PAR) in the western Pacific Ocean. The mean decay rates for total, high-fluorescence, and low-fluorescence viruses were 1.64 ± 0.21, 2.46 ± 0.43, and 1.57 ± 0.26% h-1, respect...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-19678-3

    authors: Wei W,Zhang R,Peng L,Liang Y,Jiao N

    更新日期:2018-01-24 00:00:00

  • EEG frequency tagging to explore the cortical activity related to the tactile exploration of natural textures.

    abstract::When sliding our fingertip against a textured surface, complex vibrations are produced in the skin. It is increasingly recognised that the neural transduction and processing of these vibrations plays an important role in the dynamic tactile perception of textures. The aim of the present study was to develop a novel me...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep20738

    authors: Moungou A,Thonnard JL,Mouraux A

    更新日期:2016-02-08 00:00:00

  • Enhancing electrochemical detection on graphene oxide-CNT nanostructured electrodes using magneto-nanobioprobes.

    abstract::Graphene and related materials have come to the forefront of research in electrochemical sensors during recent years due to the promising properties of these nanomaterials. Further applications of these nanomaterials have been hampered by insufficient sensitivity offered by these nanohybrids for the type of molecules ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep00877

    authors: Sharma P,Bhalla V,Dravid V,Shekhawat G,Jinsong-Wu,Prasad ES,Suri CR

    更新日期:2012-01-01 00:00:00

  • Repeated surveying over 6 years reveals that fine-scale habitat variables are key to tropical mountain ant assemblage composition and functional diversity.

    abstract::High-altitude-adapted ectotherms can escape competition from dominant species by tolerating low temperatures at cooler elevations, but climate change is eroding such advantages. Studies evaluating broad-scale impacts of global change for high-altitude organisms often overlook the mitigating role of biotic factors. Yet...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-80077-8

    authors: Muluvhahothe MM,Joseph GS,Seymour CL,Munyai TC,Foord SH

    更新日期:2021-01-08 00:00:00

  • Ultrasmall all-optical plasmonic switch and its application to superresolution imaging.

    abstract::Because of their exceptional local-field enhancement and ultrasmall mode volume, plasmonic components can integrate photonics and electronics at nanoscale, and active control of plasmons is the key. However, all-optical modulation of plasmonic response with nanometer mode volume and unity modulation depth is still lac...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep24293

    authors: Wu HY,Huang YT,Shen PT,Lee H,Oketani R,Yonemaru Y,Yamanaka M,Shoji S,Lin KH,Chang CW,Kawata S,Fujita K,Chu SW

    更新日期:2016-04-11 00:00:00

  • Kup-mediated Cs+ uptake and Kdp-driven K+ uptake coordinate to promote cell growth during excess Cs+ conditions in Escherichia coli.

    abstract::The physiological effects of caesium (Cs) on living cells are poorly understood. Here, we examined the physiological role of Cs+ on the activity of the potassium transporters in E. coli. In the absence of potassium (K+), Kup-mediated Cs+ uptake partially supported cell growth, however, at a much lower rate than with s...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-02164-7

    authors: Tanudjaja E,Hoshi N,Su YH,Hamamoto S,Uozumi N

    更新日期:2017-05-18 00:00:00

  • The effects of aquarium culture on coral oocyte ultrastructure.

    abstract::As the world's oceans are currently threatened by anthropogenic pollution and climate change, coral breeding has become an important conservation method, since it can limit marine organisms' exposure to sub-optimal environment conditions. However, the aquarium environment is inherently different from the ocean, and th...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-33341-x

    authors: Lin C,Zhuo JM,Chong G,Wang LH,Meng PJ,Tsai S

    更新日期:2018-10-11 00:00:00

  • Tailoring femtosecond 1.5-μm Bessel beams for manufacturing high-aspect-ratio through-silicon vias.

    abstract::Three-dimensional integrated circuits (3D ICs) are an attractive replacement for conventional 2D ICs as high-performance, low-power-consumption, and small-footprint microelectronic devices. However, one of the major remaining challenges is the manufacture of high-aspect-ratio through-silicon vias (TSVs), which is a cr...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep40785

    authors: He F,Yu J,Tan Y,Chu W,Zhou C,Cheng Y,Sugioka K

    更新日期:2017-01-18 00:00:00

  • Giant and reversible room-temperature elastocaloric effect in a single-crystalline Ni-Fe-Ga magnetic shape memory alloy.

    abstract::Good mechanical properties and large adiabatic temperature change render Heusler-type Ni2FeGa-based magnetic shape memory alloys as a promising candidate material for solid-state mechanical cooling application at ambient conditions. Superelastic behavior and associated elastocaloric effect strongly reply on deformatio...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep25500

    authors: Li Y,Zhao D,Liu J

    更新日期:2016-05-03 00:00:00

  • The Clinical Characteristics and Outcomes of Follicular Bronchiolitis in Chinese Adult Patients.

    abstract::Follicular bronchiolitis (FB) is a rare interstitial lung disease (ILD) and has been reported in diverse clinical contexts. Six FB patients demonstrated by surgical lung biopsy (SLB) were reviewed between 2009 and 2017 from Nanjing Drum Tower Hospital in China. The average age of subjects was 42 years old (range: 31-5...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-25670-8

    authors: Lu J,Ma M,Zhao Q,Meng F,Wang D,Cai H,Cao M

    更新日期:2018-05-08 00:00:00

  • Novel Indole-fused benzo-oxazepines (IFBOs) inhibit invasion of hepatocellular carcinoma by targeting IL-6 mediated JAK2/STAT3 oncogenic signals.

    abstract::Inspired by the well-documented tumor protecting ability of paullones, recently, we synthesized novel paullone-like scaffolds, indole-fused benzo-oxazepines (IFBOs), and screened them against hepatocellular carcinoma (HCC) specific Hep-G2 cells. Three of the synthesized compounds significantly attenuated the progressi...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-24288-0

    authors: Singh AK,Bhadauria AS,Kumar U,Raj V,Rai A,Kumar P,Keshari AK,Kumar D,Maity B,Nath S,Prakash A,Saha S

    更新日期:2018-04-12 00:00:00

  • Establishing next-generation pest control services in rice fields: eco-agriculture.

    abstract::Pesticides are commonly used in food crop production systems to control crop pests and diseases and ensure maximum yield with high market value. However, the accumulation of these chemical inputs in crop fields increases risks to biodiversity and human health. In addition, people are increasingly seeking foods in whic...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-46688-6

    authors: Ali MP,Bari MN,Haque SS,Kabir MMM,Afrin S,Nowrin F,Islam MS,Landis DA

    更新日期:2019-07-15 00:00:00

  • BioSphincters to treat Fecal Incontinence in Nonhuman Primates.

    abstract::Loss of anorectal resting pressure due to internal anal sphincter (IAS) dysfunctionality causes uncontrolled fecal soiling and leads to passive fecal incontinence (FI). The study is focused on immediate and long-term safety and potential efficacy of bioengineered IAS BioSphincters to treat passive FI in a clinically r...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-54440-3

    authors: Dadhich P,Bohl JL,Tamburrini R,Zakhem E,Scott C,Kock N,Mitchell E,Gilliam J,Bitar KN

    更新日期:2019-12-02 00:00:00

  • Histological validation of fast macromolecular proton fraction mapping as a quantitative myelin imaging method in the cuprizone demyelination model.

    abstract::Cuprizone-induced demyelination in mice is a frequently used model in preclinical multiple sclerosis research. A recent quantitative clinically-targeted MRI method, fast macromolecular proton fraction (MPF) mapping demonstrated a promise as a myelin biomarker in human and animal studies with a particular advantage of ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep46686

    authors: Khodanovich MY,Sorokina IV,Glazacheva VY,Akulov AE,Nemirovich-Danchenko NM,Romashchenko AV,Tolstikova TG,Mustafina LR,Yarnykh VL

    更新日期:2017-04-24 00:00:00

  • Fluorescence Polarization Switching from a Single Silicon Vacancy Colour Centre in Diamond.

    abstract::Single-photon emitters with stable and uniform photoluminescence properties are important for quantum technology. However, in many cases, colour centres in diamond exhibit spectral diffusion and photoluminescence intensity fluctuation. It is therefore essential to investigate the dynamics of colour centres at the sing...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep12244

    authors: Liu Y,Chen G,Rong Y,McGuinness LP,Jelezko F,Tamura S,Tanii T,Teraji T,Onoda S,Ohshima T,Isoya J,Shinada T,Wu E,Zeng H

    更新日期:2015-07-23 00:00:00

  • Noise-induced switching from a symmetry-protected shallow metastable state.

    abstract::We consider escape from a metastable state of a nonlinear oscillator driven close to triple its eigenfrequency. The oscillator can have three stable states of period-3 vibrations and a zero-amplitude state. Because of the symmetry of period-tripling, the zero-amplitude state remains stable as the driving increases. Ho...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-66243-y

    authors: Tadokoro Y,Tanaka H,Dykman MI

    更新日期:2020-06-26 00:00:00

  • cAMP-PKA-CaMKII signaling pathway is involved in aggravated cardiotoxicity during Fuzi and Beimu Combination Treatment of Experimental Pulmonary Hypertension.

    abstract::Aconiti Lateralis Radix Praeparata (Fuzi) and Fritillariae Thunbergii bulbus (Beimu) have been widely used clinically to treat cardiopulmonary related diseases in China. However, according to the classic rules of traditional Chinese medicine, Fuzi and Beimu should be prohibited to use as a combination for their incomp...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep34903

    authors: Zhuang P,Huang Y,Lu Z,Yang Z,Xu L,Sun F,Zhang Y,Duan J

    更新日期:2016-10-14 00:00:00

  • Growth of high quality and uniformity AlGaN/GaN heterostructures on Si substrates using a single AlGaN layer with low Al composition.

    abstract::By employing a single AlGaN layer with low Al composition, high quality and uniformity AlGaN/GaN heterostructures have been successfully grown on Si substrates by metal-organic chemical vapor deposition (MOCVD). The heterostructures exhibit a high electron mobility of 2150 cm(2)/Vs with an electron density of 9.3 × 10...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep23020

    authors: Cheng J,Yang X,Sang L,Guo L,Zhang J,Wang J,He C,Zhang L,Wang M,Xu F,Tang N,Qin Z,Wang X,Shen B

    更新日期:2016-03-10 00:00:00

  • Real-time Kinematic Positioning of INS Tightly Aided Multi-GNSS Ionospheric Constrained PPP.

    abstract::Real-time Precise Point Positioning (PPP) technique is being widely applied for providing precise positioning services with the significant improvement on satellite precise products accuracy. With the rapid development of the multi-constellation Global Navigation Satellite Systems (multi-GNSS), currently, about 80 nav...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep30488

    authors: Gao Z,Shen W,Zhang H,Niu X,Ge M

    更新日期:2016-07-29 00:00:00

  • Functional transcription factor target discovery via compendia of binding and expression profiles.

    abstract::Genome-wide experiments to map the DNA-binding locations of transcription-associated factors (TFs) have shown that the number of genes bound by a TF far exceeds the number of possible direct target genes. Distinguishing functional from non-functional binding is therefore a major challenge in the study of transcription...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep20649

    authors: Banks CJ,Joshi A,Michoel T

    更新日期:2016-02-09 00:00:00

  • A dual-model SERS and RRS analytical platform for Pb(II) based on Ag-doped carbon dot catalytic amplification and aptamer regulation.

    abstract::Several carbon dots doping with diferent elements (Ca, Ag, Au) were fabricated and their catalytic properties had been investigated in this paper. It was found that the Ag-doped carbon dots (CDAg) had played a role of mimic enzyme on the reaction of HAuCl4-H2O2 and generated nanogold particles with surface enhanced Ra...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-46426-y

    authors: Wang H,Huang X,Wen G,Jiang Z

    更新日期:2019-07-10 00:00:00

  • Dopamine neuron induction and the neuroprotective effects of thyroid hormone derivatives.

    abstract::Parkinson's disease (PD) is a neurodegenerative disease characterized by progressive movement disturbances caused by the selective loss of dopamine (DA) neurons in the substantia nigra. Despite the identification of the causal mechanisms underlying the pathogenesis of PD, effective treatments remain elusive. In this s...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-49876-6

    authors: Lee EH,Kim SM,Kim CH,Pagire SH,Pagire HS,Chung HY,Ahn JH,Park CH

    更新日期:2019-09-20 00:00:00

  • Effects of propofol on the inflammatory response during robot-assisted laparoscopic radical prostatectomy: a prospective randomized controlled study.

    abstract::Robot-assisted laparoscopic radical prostatectomy (RALRP) is a minimally invasive procedure; however, some amount of surgical trauma that can trigger systemic inflammation remains. Moreover, pneumoperitoneum during RALRP induces ischemia-reperfusion injury (IRI). Propofol, an anesthetic, is known to have anti-inflamma...

    journal_title:Scientific reports

    pub_type: 杂志文章,随机对照试验

    doi:10.1038/s41598-019-41708-x

    authors: Roh GU,Song Y,Park J,Ki YM,Han DW

    更新日期:2019-03-27 00:00:00

  • Inhibition of kinase IKKβ suppresses cellular abnormalities induced by the human papillomavirus oncoprotein HPV 18E6.

    abstract::Human papillomavirus (HPV) is the leading cause of cervical cancer and has been implicated in several other cancer types including vaginal, vulvar, penile, and oropharyngeal cancers. Despite the recent availability of a vaccine, there are still over 310,000 deaths each year worldwide. Current treatments for HPV-mediat...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-80193-5

    authors: Padash Barmchi M,Thomas M,Thatte JV,Vats A,Zhang B,Cagan RL,Banks L

    更新日期:2021-01-13 00:00:00

  • Optimizing rice plant photosynthate allocation reduces N2O emissions from paddy fields.

    abstract::Rice paddies are a major source of anthropogenic nitrous oxide (N2O) emissions, especially under alternate wetting-drying irrigation and high N input. Increasing photosynthate allocation to the grain in rice (Oryza sativa L.) has been identified as an effective strategy of genetic and agronomic innovation for yield en...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep29333

    authors: Jiang Y,Huang X,Zhang X,Zhang X,Zhang Y,Zheng C,Deng A,Zhang J,Wu L,Hu S,Zhang W

    更新日期:2016-07-05 00:00:00