GPR174 and ITM2A Gene Polymorphisms rs3827440 and rs5912838 on the X chromosome in Korean Children with Autoimmune Thyroid Disease.

Abstract:

:(1) Background: Autoimmune thyroid diseases (AITDs) are female predominant and much attention has been focused on G protein-coupled receptor 174 (GPR174) and integral membrane protein 2A (ITM2A) on the X chromosome as Grave's disease (GD) susceptible locus. (2) Methods: We genotyped four single nucleotide polymorphisms (SNPs), rs3810712, rs3810711, rs3827440, and rs5912838, of GPR174 and ITM2A in 115 Korean children with AITD (M = 25 and F = 90; GD = 74 (14.7 ± 3.6 years), HD = 41 (13.4 ± 3.2 years); GD-thyroid-associated ophthalmopathy (TAO) = 40, GD-non-TAO=34) and 204 healthy Korean individuals (M = 104 and F = 100). The data were analyzed by sex-stratified or combined. (3) Results: Three SNPs, rs3810712, rs3810711 and rs3827440, were found to be in perfect linkage disequilibrium (D' = 1, r2 = 1). In AITD, HD, GD, GD-TAO, and GD-non-TAO patients, rs3827440 TT/T and rs5912838 AA/A were susceptible and rs3827440 CC/C and rs5912838 CC/C were protective genotypes. When analyzed by sex, rs3827440 TT and rs5912838 AA were susceptible and rs3827440 CC and rs5912838 CC were protective genotypes in female AITD, GD, GD-TAO, and GD-non-TAO subjects. In male AITD patients, rs3827440 T and rs5912838 A were susceptible and rs3827440 C and rs5912838 C were protective genotypes. (4) Conclusions: Polymorphisms in GPR174 and ITM2A genes on the X chromosome might be associated with AITD in Korean children.

journal_name

Genes (Basel)

journal_title

Genes

authors

Cho WK,Shin HR,Lee NY,Kim SK,Ahn MB,Baek IC,Kim TG,Suh BK

doi

10.3390/genes11080858

subject

Has Abstract

pub_date

2020-07-27 00:00:00

issue

8

issn

2073-4425

pii

genes11080858

journal_volume

11

pub_type

杂志文章

相关文献

Genes文献大全
  • Comparative Genomics Analysis of Lactobacillus ruminis from Different Niches.

    abstract::Lactobacillus ruminis is a commensal motile lactic acid bacterium living in the intestinal tract of humans and animals. Although a few genomes of L. ruminis were published, most of them were animal derived. To explore the genetic diversity and potential niche-specific adaptation changes of L. ruminis, in the current w...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11010070

    authors: Wang S,Yang B,Ross RP,Stanton C,Zhao J,Zhang H,Chen W

    更新日期:2020-01-08 00:00:00

  • Host-Induced Gene Silencing of Rice Blast Fungus Magnaporthe oryzae Pathogenicity Genes Mediated by the Brome Mosaic Virus.

    abstract::Magnaportheoryzae is a devastating plant pathogen, which has a detrimental impact on rice production worldwide. Despite its agronomical importance, some newly-emerging pathotypes often overcome race-specific disease resistance rapidly. It is thus desirable to develop a novel strategy for the long-lasting resistance of...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes8100241

    authors: Zhu L,Zhu J,Liu Z,Wang Z,Zhou C,Wang H

    更新日期:2017-09-26 00:00:00

  • An Introduction to Systems Analytics and Integration of Big Omics Data.

    abstract::A major technological shift in the research community in the past decade has been the adoption of high throughput (HT) technologies to interrogate the genome, epigenome, transcriptome, and proteome in a massively parallel fashion [...]. ...

    journal_title:Genes

    pub_type: 社论

    doi:10.3390/genes11030245

    authors: Hardiman G

    更新日期:2020-02-26 00:00:00

  • Genome-Wide Identification and Expression Analysis of the HD-Zip Gene Family in Wheat (Triticum aestivum L.).

    abstract::The homeodomain-leucine zipper (HD-Zip) gene family, as plant-specific transcription factors, plays an important role in plant development and growth as well as in the response to diverse stresses. Although HD-Zip genes have been extensively studied in many plants, they had not yet been studied in wheat, especially th...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9020070

    authors: Yue H,Shu D,Wang M,Xing G,Zhan H,Du X,Song W,Nie X

    更新日期:2018-02-01 00:00:00

  • Dissecting Tissue-Specific Transcriptomic Responses from Leaf and Roots under Salt Stress in Petunia hybrida Mitchell.

    abstract::One of the primary objectives of plant biotechnology is to increase resistance to abiotic stresses, such as salinity. Salinity is a major abiotic stress and increasing crop resistant to salt continues to the present day as a major challenge. Salt stress disturbs cellular environment leading to protein misfolding, affe...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes8080195

    authors: Villarino GH,Hu Q,Scanlon MJ,Mueller L,Bombarely A,Mattson NS

    更新日期:2017-08-03 00:00:00

  • Novel Insights into the Protective Properties of ACTH(4-7)PGP (Semax) Peptide at the Transcriptome Level Following Cerebral Ischaemia-Reperfusion in Rats.

    abstract::Cerebral ischaemia is the most common cause of impaired brain function. Biologically active peptides represent potential drugs for reducing the damage that occurs after ischaemia. The synthetic melanocortin derivative, ACTH(4-7)PGP (Semax), has been used successfully in the treatment of patients with severe impairment...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11060681

    authors: Filippenkov IB,Stavchansky VV,Denisova AE,Yuzhakov VV,Sevan'kaeva LE,Sudarkina OY,Dmitrieva VG,Gubsky LV,Myasoedov NF,Limborska SA,Dergunova LV

    更新日期:2020-06-22 00:00:00

  • The Effect of Tobacco Smoking Differs across Indices of DNA Methylation-Based Aging in an African American Sample: DNA Methylation-Based Indices of Smoking Capture These Effects.

    abstract::Smoking is one of the leading preventable causes of morbidity and mortality worldwide, prompting interest in its association with DNA methylation-based measures of biological aging. Considerable progress has been made in developing DNA methylation-based measures that correspond to self-reported smoking status. In addi...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11030311

    authors: Lei MK,Gibbons FX,Simons RL,Philibert RA,Beach SRH

    更新日期:2020-03-14 00:00:00

  • The Global Hepatitis B Virus Genotype Distribution Approximated from Available Genotyping Data.

    abstract::Hepatitis B virus (HBV) is divided into nine genotypes, A to I. Currently, it remains unclear how the individual genotypes contribute to the estimated 250 million chronic HBV infections. We performed a literature search on HBV genotyping data throughout the world. Over 900 publications were assessed and data were extr...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9100495

    authors: Velkov S,Ott JJ,Protzer U,Michler T

    更新日期:2018-10-15 00:00:00

  • DNA Damage Repair System in Plants: A Worldwide Research Update.

    abstract::Living organisms are usually exposed to various DNA damaging agents so the mechanisms to detect and repair diverse DNA lesions have developed in all organisms with the result of maintaining genome integrity. Defects in DNA repair machinery contribute to cancer, certain diseases, and aging. Therefore, conserving the ge...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes8110299

    authors: Gimenez E,Manzano-Agugliaro F

    更新日期:2017-10-30 00:00:00

  • Transcriptome-Wide Survey and Expression Profile Analysis of Putative Chrysanthemum HD-Zip I and II Genes.

    abstract::The homeodomain-leucine zipper (HD-Zip) transcription factor family is a key transcription factor family and unique to the plant kingdom. It consists of a homeodomain and a leucine zipper that serve in combination as a dimerization motif. The family can be classified into four subfamilies, and these subfamilies partic...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes7050019

    authors: Song A,Li P,Xin J,Chen S,Zhao K,Wu D,Fan Q,Gao T,Chen F,Guan Z

    更新日期:2016-05-17 00:00:00

  • Differential DNA Methylation Landscape in Skin Fibroblasts from African Americans with Systemic Sclerosis.

    abstract::The etiology and reasons underlying the ethnic disparities in systemic sclerosis (SSc) remain unknown. African Americans are disproportionally affected by SSc and yet are underrepresented in research. The aim of this study was to comprehensively investigate the association of DNA methylation levels with SSc in dermal ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes12020129

    authors: Baker Frost D,da Silveira W,Hazard ES,Atanelishvili I,Wilson RC,Flume J,Day KL,Oates JC,Bogatkevich GS,Feghali-Bostwick C,Hardiman G,Ramos PS

    更新日期:2021-01-20 00:00:00

  • Characterization and Transcriptome Studies of Autoinducer Synthase Gene from Multidrug Resistant Acinetobacter baumannii Strain 863.

    abstract::Quorum sensing (QS) is a cell-to-cell communication system that uses autoinducers as signaling molecules to enable inter-species and intra-species interactions in response to external stimuli according to the population density. QS allows bacteria such as Acinetobacter baumannii to react rapidly in response to environ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10040282

    authors: Ng CK,How KY,Tee KK,Chan KG

    更新日期:2019-04-08 00:00:00

  • PPARGC1A rs8192678 and NRF1 rs6949152 Polymorphisms Are Associated with Muscle Fiber Composition in Women.

    abstract::PPARGC1A rs8192678 G/A (Gly482Ser) and NRF1 rs6949152 A/G polymorphisms have been associated with endurance athlete status, endurance performance phenotypes, and certain health-related markers of different pathologies such as metabolic syndrome, diabetes, and dyslipidemia. We hypothesized that they could be considered...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11091012

    authors: Yvert T,Miyamoto-Mikami E,Tobina T,Shiose K,Kakigi R,Tsuzuki T,Takaragawa M,Ichinoseki-Sekine N,Pérez M,Kobayashi H,Tanaka H,Naito H,Fuku N

    更新日期:2020-08-27 00:00:00

  • Proteomic Analysis of Methanonatronarchaeum thermophilum AMET1, a Representative of a Putative New Class of Euryarchaeota, "Methanonatronarchaeia".

    abstract::The recently discovered Methanonatronarchaeia are extremely halophilic and moderately thermophilic methyl-reducing methanogens representing a novel class-level lineage in the phylum Euryarchaeota related to the class Halobacteria. Here we present a detailed analysis of 1D-nano liquid chromatography-electrospray ioniza...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9020028

    authors: Ferrer M,Sorokin DY,Wolf YI,Ciordia S,Mena MC,Bargiela R,Koonin EV,Makarova KS

    更新日期:2018-01-23 00:00:00

  • Inhibition of the Lipid Droplet-Peroxisome Proliferator-Activated Receptor α Axis Suppresses Cancer Stem Cell Properties.

    abstract::Cancer stem cells (CSCs), having both self-renewal and tumorigenic capacity, utilize an energy metabolism system different from that of non-CSCs. Lipid droplets (LDs) are organelles that store neutral lipids, including triacylglycerol. Previous studies demonstrated that LDs are formed and store lipids as an energy sou...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes12010099

    authors: Kuramoto K,Yamamoto M,Suzuki S,Togashi K,Sanomachi T,Kitanaka C,Okada M

    更新日期:2021-01-14 00:00:00

  • The Tumor Suppressor p53 in Mucosal Melanoma of the Head and Neck.

    abstract::Despite worldwide prevention programs, the incidence for cutaneous melanoma is continuously increasing. Mucosal melanoma (MM) represents a rare but highly aggressive phenotype of common melanoma with predilection in the sinonasal system. Far away from ultraviolet sun exposure, the molecular mechanisms underlying tumor...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes8120384

    authors: Fritsche MK,Knopf A

    更新日期:2017-12-13 00:00:00

  • Targeting MDM4 Splicing in Cancers.

    abstract::MDM4, an essential negative regulator of the P53 tumor suppressor, is frequently overexpressed in cancer cells that harbor a wild-type P53. By a mechanism based on alternative splicing, the MDM4 gene generates two mutually exclusive isoforms: MDM4-FL, which encodes the full-length MDM4 protein, and a shorter splice va...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes8020082

    authors: Bardot B,Toledo F

    更新日期:2017-02-20 00:00:00

  • Artificial Intelligence and Integrated Genotype⁻Phenotype Identification.

    abstract::The integration of phenotypes and genotypes is at an unprecedented level and offers new opportunities to establish deep phenotypes. There are a number of challenges to overcome, specifically, accelerated growth of data, data silos, incompleteness, inaccuracies, and heterogeneity within and across data sources. This pe...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10010018

    authors: Frey LJ

    更新日期:2018-12-28 00:00:00

  • Drosophila Interspecific Hybridization Causes A Deregulation of the piRNA Pathway Genes.

    abstract::Almost all eukaryotes have transposable elements (TEs) against which they have developed defense mechanisms. In the Drosophila germline, the main transposable element (TE) regulation pathway is mediated by specific Piwi-interacting small RNAs (piRNAs). Nonetheless, for unknown reasons, TEs sometimes escape cellular co...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11020215

    authors: Gámez-Visairas V,Romero-Soriano V,Martí-Carreras J,Segarra-Carrillo E,García Guerreiro MP

    更新日期:2020-02-19 00:00:00

  • Microfluidic Quantitative PCR Detection of 12 Transgenes from Horse Plasma for Gene Doping Control.

    abstract::Gene doping, an activity which abuses and misuses gene therapy, is a major concern in sports and horseracing industries. Effective methods capable of detecting and monitoring gene doping are urgently needed. Although several PCR-based methods that detect transgenes have been developed, many of them focus only on a sin...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11040457

    authors: Tozaki T,Ohnuma A,Kikuchi M,Ishige T,Kakoi H,Hirota KI,Kusano K,Nagata SI

    更新日期:2020-04-23 00:00:00

  • Differential Enzymatic Activity of Rat ADAR2 Splicing Variants Is Due to Altered Capability to Interact with RNA in the Deaminase Domain.

    abstract::In mammals, adenosine (A) to inosine (I) RNA editing is performed by adenosine deaminases acting on RNA (ADAR), ADAR1 and ADAR2 enzymes, encoded by mRNAs that might undergo splicing process. In rat, two splicing events produce several isoforms of ADAR2, called ADAR2a, ADAR2b, ADAR2e, and ADAR2f, but only ADAR2a and AD...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9020079

    authors: Filippini A,Bonini D,Giacopuzzi E,La Via L,Gangemi F,Colombi M,Barbon A

    更新日期:2018-02-08 00:00:00

  • Ectopic Expression of AhGLK1b (GOLDEN2-like Transcription Factor) in Arabidopsis Confers Dual Resistance to Fungal and Bacterial Pathogens.

    abstract::GOLDEN2-LIKE (GLK) is a member of the myeloblastosis (MYB) family transcription factor and it plays an important role in the regulation of plastid development and stress tolerance. In this study, a gene named AhGLK1b was identified from a cultivated peanut showing down-regulation in response to low calcium with a comp...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11030343

    authors: Ali N,Chen H,Zhang C,Khan SA,Gandeka M,Xie D,Zhuang W

    更新日期:2020-03-24 00:00:00

  • The role of bromodomain proteins in regulating gene expression.

    abstract::Histone modifications are important in regulating gene expression in eukaryotes. Of the numerous histone modifications which have been identified, acetylation is one of the best characterised and is generally associated with active genes. Histone acetylation can directly affect chromatin structure by neutralising char...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes3020320

    authors: Josling GA,Selvarajah SA,Petter M,Duffy MF

    更新日期:2012-05-29 00:00:00

  • Sustentacular Cell Enwrapment of Olfactory Receptor Neuronal Dendrites: An Update.

    abstract::The pseudostratified olfactory epithelium (OE) may histologically appear relatively simple, but the cytological relations among its cell types, especially those between olfactory receptor neurons (ORNs) and olfactory sustentacular cells (OSCs), prove more complex and variable than previously believed. Adding to the co...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes11050493

    authors: Liang F

    更新日期:2020-04-30 00:00:00

  • CYP6P9-Driven Signatures of Selective Sweep of Metabolic Resistance to Pyrethroids in the Malaria Vector Anopheles funestus Reveal Contemporary Barriers to Gene Flow.

    abstract::Pyrethroid resistance in major malaria vectors such as Anopheles funestus threatens malaria control efforts in Africa. Cytochrome P450-mediated metabolic resistance is best understood for CYP6P9 genes in southern Africa in An. funestus. However, we do not know if this resistance mechanism is spreading across Africa an...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11111314

    authors: Djuicy DD,Hearn J,Tchouakui M,Wondji MJ,Irving H,Okumu FO,Wondji CS

    更新日期:2020-11-05 00:00:00

  • Development of Tissue-Specific Age Predictors Using DNA Methylation Data.

    abstract::DNA methylation patterns have been shown to change throughout the normal aging process. Several studies have found epigenetic aging markers using age predictors, but these studies only focused on blood-specific or tissue-common methylation patterns. Here, we constructed nine tissue-specific age prediction models using...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10110888

    authors: Choi H,Joe S,Nam H

    更新日期:2019-11-04 00:00:00

  • Influence of Genetic Variation in COMT on Cisplatin-Induced Nephrotoxicity in Cancer Patients.

    abstract::Cisplatin is a chemotherapeutic agent widely used for multiple indications. Unfortunately, in a substantial set of patients treated with cisplatin, dose-limiting acute kidney injury (AKI) occurs. Here, we assessed the association of 3 catechol-O-methyltransferase (COMT) single nucleotide polymorphisms (SNPs) with incr...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11040358

    authors: Agema BC,Koolen SLW,With M,Doorn NV,Heersche N,Hoop EO,Visser S,Aerts JGJV,Bins S,Schaik RHNV,Mathijssen RHJ

    更新日期:2020-03-27 00:00:00

  • Beyond junk-variable tandem repeats as facilitators of rapid evolution of regulatory and coding sequences.

    abstract::Copy Number Variations (CNVs) and Single Nucleotide Polymorphisms (SNPs) have been the major focus of most large-scale comparative genomics studies to date. Here, we discuss a third, largely ignored, type of genetic variation, namely changes in tandem repeat number. Historically, tandem repeats have been designated as...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes3030461

    authors: Gemayel R,Cho J,Boeynaems S,Verstrepen KJ

    更新日期:2012-07-26 00:00:00

  • Identification of Histone H3 (HH3) Genes in Gossypium hirsutum Revealed Diverse Expression During Ovule Development and Stress Responses.

    abstract::Histone acts as the core for nucleosomes and is a key protein component of chromatin. Among different histone variants, histone H3 (HH3) variants have been reported to play vital roles in plant development. However, biological information and evolutionary relationships of HH3 genes in cotton remain to be elucidated. T...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10050355

    authors: Qanmber G,Ali F,Lu L,Mo H,Ma S,Wang Z,Yang Z

    更新日期:2019-05-09 00:00:00

  • Hair of the Dog: Identification of a Cis-Regulatory Module Predicted to Influence Canine Coat Composition.

    abstract::Each domestic dog breed is characterized by a strict set of physical and behavioral characteristics by which breed members are judged and rewarded in conformation shows. One defining feature of particular interest is the coat, which is comprised of either a double- or single-layer of hair. The top coat contains coarse...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10050323

    authors: Whitaker DT,Ostrander EA

    更新日期:2019-04-26 00:00:00