Analysis of Gene Expression of miRNA-106b-5p and TRAIL in the Apoptosis Pathway in Gastric Cancer.

Abstract:

:Helicobacter pylori (H. pylori) is one of the main causes of gastric gancer. TNF-related apoptosis-inducing ligand (TRAIL) is a protein able to promote apoptosis in cancer cells, however not in gastric cancer, which presents resistance to apoptosis via TRAIL. It is believed that MicroRNA-106b-5p might be involved in this resistance, although its role in Gastric Cancer is unclear. We aimed to determine the expression of microRNA-106b-5p and TRAIL in patients with gastric diseases, infected by H. pylori, and understand the relationship between these genes and their role in apoptosis and the gastric cancer pathways. H. pylori was detected by PCR, gene expression analysis was performed by real-time-qPCR, and bioinformatics analysis was performed using the Kyoto Encyclopedia of Genes and Genomes (KEGG) and Cytoscape software. A total of 244 patients were divided into groups (Control, Gastritis, and Cancer); H. pylori was detected in 42.2% of the samples. The cancer group had a poor expression of TRAIL (p < 0.0001) and overexpression of microRNA-106b-5p (p=0.0005), however, our results confirmed that these genes are not directly related to each other although both are apoptosis-related regulators. Our results also indicated that H. pylori decreases microRNA-106b-5p expression and that this is a carcinogenic bacterium responsible for gastric diseases.

journal_name

Genes (Basel)

journal_title

Genes

authors

Pereira J,Santos M,Delabio R,Barbosa M,Smith M,Payão S,Rasmussen L

doi

10.3390/genes11040393

subject

Has Abstract

pub_date

2020-04-05 00:00:00

issue

4

issn

2073-4425

pii

genes11040393

journal_volume

11

pub_type

杂志文章

相关文献

Genes文献大全
  • Germline-Specific Repetitive Elements in Programmatically Eliminated Chromosomes of the Sea Lamprey (Petromyzon marinus).

    abstract::The sea lamprey (Petromyzon marinus) is one of few vertebrate species known to reproducibly eliminate large fractions of its genome during normal embryonic development. This germline-specific DNA is lost in the form of large fragments, including entire chromosomes, and available evidence suggests that DNA elimination ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10100832

    authors: Timoshevskiy VA,Timoshevskaya NY,Smith JJ

    更新日期:2019-10-22 00:00:00

  • Effect of ACTN3 R577X Genotype on Injury Epidemiology in Elite Endurance Runners.

    abstract::The p.R577X polymorphism (rs1815739) in the ACTN3 gene causes individuals with the ACTN3 XX genotype to be deficient in functional α-actinin-3. Previous investigations have found that XX athletes are more prone to suffer non-contact muscle injuries. This investigation aimed to determine the influence of the ACTN3 R577...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes12010076

    authors: Gutiérrez-Hellín J,Baltazar-Martins G,Aguilar-Navarro M,Ruiz-Moreno C,Oliván J,Del Coso J

    更新日期:2021-01-08 00:00:00

  • Influence of Genetic Variation in COMT on Cisplatin-Induced Nephrotoxicity in Cancer Patients.

    abstract::Cisplatin is a chemotherapeutic agent widely used for multiple indications. Unfortunately, in a substantial set of patients treated with cisplatin, dose-limiting acute kidney injury (AKI) occurs. Here, we assessed the association of 3 catechol-O-methyltransferase (COMT) single nucleotide polymorphisms (SNPs) with incr...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11040358

    authors: Agema BC,Koolen SLW,With M,Doorn NV,Heersche N,Hoop EO,Visser S,Aerts JGJV,Bins S,Schaik RHNV,Mathijssen RHJ

    更新日期:2020-03-27 00:00:00

  • Characterization of DNA Methylation in Circulating Tumor Cells.

    abstract::Epigenetics contributes to molecular mechanisms leading to tumor cell transformation and systemic progression of cancer. However, the dynamics of epigenetic remodeling during metastasis remains unexplored. In this context, circulating tumor cells (CTCs) might enable a direct insight into epigenetic mechanisms relevant...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes6041053

    authors: Pixberg CF,Schulz WA,Stoecklein NH,Neves RP

    更新日期:2015-10-21 00:00:00

  • NF-YA Overexpression in Lung Cancer: LUSC.

    abstract::The CCAAT box is recognized by the trimeric transcription factor NF-Y, whose NF-YA subunit is present in two major splicing isoforms, NF-YAl ("long") and NF-YAs ("short"). Little is known about the expression levels of NF-Y subunits in tumors, and nothing in lung cancer. By interrogating RNA-seq TCGA and GEO datasets,...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10110937

    authors: Bezzecchi E,Ronzio M,Dolfini D,Mantovani R

    更新日期:2019-11-17 00:00:00

  • Plateau Grass and Greenhouse Flower? Distinct Genetic Basis of Closely Related Toad Tadpoles Respectively Adapted to High Altitude and Karst Caves.

    abstract::Genetic adaptation to extremes is a fascinating topic. Nevertheless, few studies have explored the genetic adaptation of closely related species respectively inhabiting distinct extremes. With deep transcriptome sequencing, we attempt to detect the genetic architectures of tadpoles of five closely related toad species...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11020123

    authors: Chang L,Zhu W,Shi S,Zhang M,Jiang J,Li C,Xie F,Wang B

    更新日期:2020-01-22 00:00:00

  • RNA-Seq Analyses Identify Additivity as the Predominant Gene Expression Pattern in F1 Chicken Embryonic Brain and Liver.

    abstract::The superior performance of hybrids to parents, termed heterosis, has been widely utilized in animal and plant breeding programs, but the molecular mechanism underlying heterosis remains an enigma. RNA-Seq provides a novel way to investigate heterosis at the transcriptome-wide level, because gene expression functions ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10010027

    authors: Zhuo Z,Lamont SJ,Abasht B

    更新日期:2019-01-07 00:00:00

  • Comparative Genomics of the Transport Proteins of Ten Lactobacillus Strains.

    abstract::The genus Lactobacillus includes species that may inhabit different anatomical locations in the human body, but the greatest percentage of its species are inhabitants of the gut. Lactobacilli are well known for their probiotic characteristics, although some species may become pathogenic and exert negative effects on h...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11101234

    authors: Zafar H,Saier MH Jr

    更新日期:2020-10-21 00:00:00

  • Genome-Wide Profiling of Enterotoxigenic Staphylococcus aureus Strains Used for the Production of Naturally Contaminated Cheeses.

    abstract::Staphylococcus aureus is a major human pathogen and an important cause of livestock infections. More than 20 staphylococcal enterotoxins with emetic activity can be produced by specific strains responsible for staphylococcal food poisoning, one of the most common food-borne diseases. Whole genome sequencing provides a...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11010033

    authors: Macori G,Bellio A,Bianchi DM,Chiesa F,Gallina S,Romano A,Zuccon F,Cabrera-Rubio R,Cauquil A,Merda D,Auvray F,Decastelli L

    更新日期:2019-12-27 00:00:00

  • From the Outside to the Inside: New Insights on the Main Factors That Guide Seed Dormancy and Germination.

    abstract::The transition from a dormant to a germinating seed represents a crucial developmental switch in the life cycle of a plant. Subsequent transition from a germinating seed to an autotrophic organism also requires a robust and multi-layered control. Seed germination and seedling growth are multistep processes, involving ...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes12010052

    authors: Longo C,Holness S,De Angelis V,Lepri A,Occhigrossi S,Ruta V,Vittorioso P

    更新日期:2020-12-31 00:00:00

  • Venous Thromboembolism in Prader-Willi Syndrome: A Questionnaire Survey.

    abstract::Prader-Willi Syndrome Association (USA) monitors the ongoing health and welfare of individuals with Prader-Willi syndrome (PWS) through active communication with members by membership surveys and data registries. Thromboembolism and blood clots have emerged in clinical studies as significant risk factors for injury an...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10070550

    authors: Manzardo AM,Heinemann J,McManus B,Loker C,Loker J,Butler MG

    更新日期:2019-07-19 00:00:00

  • Characterization, Knockdown and Parental Effect of Hexokinase Gene of Cnaphalocrocis medinalis (Lepidoptera: Pyralidae) Revealed by RNA Interference.

    abstract::Hexokinase (HK) is a key enzyme in chitin biosynthesis in insects and plays an important role in development and energy regulation. It also performs a crucial role in the synthesis of Glucose-6-phosphate and its putative functions are studied via injection of dsRNA corresponding to the hexokinase gene from Cnaphalocro...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11111258

    authors: Shakeel M,Du J,Li SW,Zhou YJ,Sarwar N,Bukhari SAH

    更新日期:2020-10-26 00:00:00

  • Exposure to Formaldehyde Perturbs the Mouse Gut Microbiome.

    abstract::Exposure to Formaldehyde (FA) results in many pathophysiological symptoms, however the underlying mechanisms are not well understood. Given the complicated modulatory role of intestinal microbiota on human health, we hypothesized that interactions between FA and the gut microbiome may account for FA's toxicity. Balb/c...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9040192

    authors: Guo J,Zhao Y,Jiang X,Li R,Xie H,Ge L,Xie B,Yang X,Zhang L

    更新日期:2018-04-03 00:00:00

  • Identification of Differentially Expressed Genes between Original Breast Cancer and Xenograft Using Machine Learning Algorithms.

    abstract::Breast cancer is one of the most common malignancies in women. Patient-derived tumor xenograft (PDX) model is a cutting-edge approach for drug research on breast cancer. However, PDX still exhibits differences from original human tumors, thereby challenging the molecular understanding of tumorigenesis. In particular, ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9030155

    authors: Wang D,Li JR,Zhang YH,Chen L,Huang T,Cai YD

    更新日期:2018-03-12 00:00:00

  • Genome-Wide Identification of Na+/H+ Antiporter (NHX) Genes in Sugar Beet (Beta vulgaris L.) and Their Regulated Expression under Salt Stress.

    abstract::Salinity is one of the major environment factors that limits the growth of plants and the productivity of crops worldwide. It has been shown that Na+ transporters play a central role in salt tolerance and development of plants. The objective of this study was to identify Na+/H+ antiporter (NHX) genes and investigate t...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10050401

    authors: Wu GQ,Wang JL,Li SJ

    更新日期:2019-05-27 00:00:00

  • Impact of Chromatin on HIV Replication.

    abstract::Chromatin influences Human Immunodeficiency Virus (HIV) integration and replication. This review highlights critical host factors that influence chromatin structure and organization and that also impact HIV integration, transcriptional regulation and latency. Furthermore, recent attempts to target chromatin associated...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes6040957

    authors: Agosto LM,Gagne M,Henderson AJ

    更新日期:2015-09-30 00:00:00

  • Genome Sequence of the Freshwater Yangtze Finless Porpoise.

    abstract::The Yangtze finless porpoise (Neophocaena asiaeorientalis ssp. asiaeorientalis) is a subspecies of the narrow-ridged finless porpoise (N. asiaeorientalis). In total, 714.28 gigabases (Gb) of raw reads were generated by whole-genome sequencing of the Yangtze finless porpoise, using an Illumina HiSeq 2000 platform. Afte...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9040213

    authors: Yuan Y,Zhang P,Wang K,Liu M,Li J,Zheng J,Wang D,Xu W,Lin M,Dong L,Zhu C,Qiu Q,Li S

    更新日期:2018-04-16 00:00:00

  • CircRNA-006258 Sponge-Adsorbs miR-574-5p to Regulate Cell Growth and Milk Synthesis via EVI5L in Goat Mammary Epithelial Cells.

    abstract::The development of the udder and the milk yield are closely related to the number and vitality of mammary epithelial cells. Many previous studies have proved that non-coding RNAs (ncRNAs) are widely involved in mammary gland development and the physiological activities of lactation. Our laboratory previous sequencing ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11070718

    authors: Zhang M,Ma L,Liu Y,He Y,Li G,An X,Cao B

    更新日期:2020-06-28 00:00:00

  • Sequence Expression of Supernumerary B Chromosomes: Function or Fluff?

    abstract::B chromosomes are enigmatic heritable elements found in the genomes of numerous plant and animal species. Contrary to their broad distribution, most B chromosomes are non-essential. For this reason, they are regarded as genome parasites. In order to be stably transmitted through generations, many B chromosomes exhibit...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes10020123

    authors: Dalla Benetta E,Akbari OS,Ferree PM

    更新日期:2019-02-08 00:00:00

  • Fitness Costs of the Glutathione S-Transferase Epsilon 2 (L119F-GSTe2) Mediated Metabolic Resistance to Insecticides in the Major African Malaria Vector Anopheles Funestus.

    abstract::Metabolic resistance to insecticides threatens malaria control. However, little is known about its fitness cost in field populations of malaria vectors, thus limiting the design of suitable resistance management strategies. Here, we assessed the association between the glutathione S-transferase GSTe2-mediated metaboli...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9120645

    authors: Tchouakui M,Riveron JM,Djonabaye D,Tchapga W,Irving H,Soh Takam P,Njiokou F,Wondji CS

    更新日期:2018-12-19 00:00:00

  • Unmasking Intra-tumoral Heterogeneity and Clonal Evolution in NF1-MPNST.

    abstract::Sarcomas are highly aggressive cancers that have a high propensity for metastasis, fail to respond to conventional therapies, and carry a poor 5-year survival rate. This is particularly true for patients with neurofibromatosis type 1 (NF1), in which 8%-13% of affected individuals will develop a malignant peripheral ne...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11050499

    authors: Moon CI,Tompkins W,Wang Y,Godec A,Zhang X,Pipkorn P,Miller CA,Dehner C,Dahiya S,Hirbe AC

    更新日期:2020-05-01 00:00:00

  • Distribution of the Warmblood Fragile Foal Syndrome Type 1 Mutation (PLOD1 c.2032G>A) in Different Horse Breeds from Europe and the United States.

    abstract::Warmblood fragile foal syndrome (WFFS) is an autosomal recessive disorder caused by a single nucleotide variant in the procollagen-lysine-2-oxoglutarate-5-dioxygenase 1 gene (PLOD1:c.2032G>A, p.Gly678Arg). Homozygosity for the PLOD1 variant causes an Ehler-Danlos-like syndrome, which has to date only been reported in ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11121518

    authors: Reiter S,Wallner B,Brem G,Haring E,Hoelzle L,Stefaniuk-Szmukier M,Długosz B,Piórkowska K,Ropka-Molik K,Malvick J,Penedo MCT,Bellone RR

    更新日期:2020-12-18 00:00:00

  • Identification of a Novel Imprinted Transcript in the Porcine GNAS Complex Locus Using Methylome and Transcriptome of Parthenogenetic Fetuses.

    abstract::Genomic imprinting in domestic animals contributes to the variance of performance traits. However, research remains to be done on large-scale detection of epigenetic landscape of porcine imprinted loci including the GNAS complex locus. The purpose of this study was to generate porcine parthenogenetic fetuses and compr...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11010096

    authors: Ahn J,Wu H,Lee J,Hwang IS,Yu D,Ahn JS,Lee JW,Hwang S,Lee K

    更新日期:2020-01-14 00:00:00

  • Molecular and Cellular Mechanisms of Action of Tumour Suppressor GAS5 LncRNA.

    abstract::It is increasingly recognised that lncRNAs play essential regulatory roles in fundamental biological processes and, consequently, that their dysregulation may contribute to major human diseases, including cancer. Better understanding of lncRNA biology may therefore offer new insights into pathogenetic mechanisms and t...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes6030484

    authors: Pickard MR,Williams GT

    更新日期:2015-07-07 00:00:00

  • The Chloroplast Genome Sequence of Scutellaria baicalensis Provides Insight into Intraspecific and Interspecific Chloroplast Genome Diversity in Scutellaria.

    abstract::Scutellaria baicalensis Georgi (Lamiaceae) is the source of the well-known traditional Chinese medicine "HuangQin" (Radix Scutellariae). Natural sources of S. baicalensis are rapidly declining due to high market demand and overexploitation. Moreover, the commercial products of Radix Scutellariae have often been found ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes8090227

    authors: Jiang D,Zhao Z,Zhang T,Zhong W,Liu C,Yuan Q,Huang L

    更新日期:2017-09-13 00:00:00

  • Satellite DNA Mapping in Pseudis fusca (Hylidae, Pseudinae) Provides New Insights into Sex Chromosome Evolution in Paradoxical Frogs.

    abstract::In the frog genus Pseudis, previous works found a sex-linked heteromorphism of the PcP190 satellite DNA in the nucleolus organizer region (NOR)-bearing chromosome pairs of Pseudis bolbodactyla and Pseudis tocantins, which possess a ZZ/ZW sex determination system. A pericentromeric inversion was inferred to have occurr...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10020160

    authors: Gatto KP,Seger KR,Garcia PCA,Lourenço LB

    更新日期:2019-02-19 00:00:00

  • Review of the Application of Modern Cytogenetic Methods (FISH/GISH) to the Study of Reticulation (Polyploidy/Hybridisation).

    abstract::The convergence of distinct lineages upon interspecific hybridisation, including when accompanied by increases in ploidy (allopolyploidy), is a driving force in the origin of many plant species. In plant breeding too, both interspecific hybridisation and allopolyploidy are important because they facilitate introgressi...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes1020166

    authors: Chester M,Leitch AR,Soltis PS,Soltis DE

    更新日期:2010-07-02 00:00:00

  • The Response to DNA Damage at Telomeric Repeats and Its Consequences for Telomere Function.

    abstract::Telomeric repeats, coated by the shelterin complex, prevent inappropriate activation of the DNA damage response at the ends of linear chromosomes. Shelterin has evolved distinct solutions to protect telomeres from different aspects of the DNA damage response. These solutions include formation of t-loops, which can seq...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes10040318

    authors: Doksani Y

    更新日期:2019-04-24 00:00:00

  • Reducing the Number of Mismatches between Hairs and Buccal References When Analysing mtDNA Heteroplasmic Variation by Massively Parallel Sequencing.

    abstract::In forensics, mitochondrial DNA (mtDNA) analysis is foremost applied to rootless hairs often lacking detectable nuclear DNA. Sanger sequencing is the routine mtDNA method in most forensic laboratories, even though interpretation of mixed samples and heteroplasmic sites can be challenging. Individuals may hold cells wi...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11111355

    authors: Gaag KJV,Desmyter S,Smit S,Prieto L,Sijen T

    更新日期:2020-11-16 00:00:00

  • Proteomics Reveals Distinct Changes Associated with Increased Gamma Radiation Resistance in the Black Yeast Exophiala dermatitidis.

    abstract::The yeast Exophiala dermatitidis exhibits high resistance to γ-radiation in comparison to many other fungi. Several aspects of this phenotype have been characterized, including its dependence on homologous recombination for the repair of radiation-induced DNA damage, and the transcriptomic response invoked by acute γ-...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11101128

    authors: Schultzhaus ZS,Schultzhaus JN,Romsdahl J,Chen A,Hervey Iv WJ,Leary DH,Wang Z

    更新日期:2020-09-25 00:00:00