Abstract:
:Epigenetics contributes to molecular mechanisms leading to tumor cell transformation and systemic progression of cancer. However, the dynamics of epigenetic remodeling during metastasis remains unexplored. In this context, circulating tumor cells (CTCs) might enable a direct insight into epigenetic mechanisms relevant for metastasis by providing direct access to systemic cancer. CTCs can be used as prognostic markers in cancer patients and are regarded as potential metastatic precursor cells. However, despite substantial technical progress, the detection and molecular characterization of CTCs remain challenging, in particular the analysis of DNA methylation. As recent studies have started to address the epigenetic state of CTCs, we discuss here the potential of such investigations to elucidate mechanisms of metastasis and to develop tumor biomarkers.
journal_name
Genes (Basel)journal_title
Genesauthors
Pixberg CF,Schulz WA,Stoecklein NH,Neves RPdoi
10.3390/genes6041053subject
Has Abstractpub_date
2015-10-21 00:00:00pages
1053-75issue
4issn
2073-4425pii
genes6041053journal_volume
6pub_type
杂志文章,评审相关文献
Genes文献大全abstract::Acute myeloid leukemia (AML) can develop as a secondary malignancy following radiotherapy, but also following low-dose environmental or occupational radiation exposure. Therapy-related AML frequently carries deletions of chromosome 5q and/or 7, but for low-dose exposure associated AML this has not been described. For ...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes2020384
更新日期:2011-05-31 00:00:00
abstract::Lysosomal storage disorders (LSDs) represent a group of more than 50 severe metabolic diseases caused by the deficiency of specific lysosomal hydrolases, activators, carriers, or lysosomal integral membrane proteins, leading to the abnormal accumulation of substrates within the lysosomes. Numerous mutations have been ...
journal_title:Genes
pub_type: 杂志文章,评审
doi:10.3390/genes9020073
更新日期:2018-02-06 00:00:00
abstract::Although genome-wide association studies (GWAS) have identified several hundred loci associated with autoimmune diseases, their mechanistic insights are still poorly understood. The human genome is more complex than single nucleotide polymorphisms (SNPs) that are interrogated by GWAS arrays. Apart from SNPs, it also c...
journal_title:Genes
pub_type: 杂志文章,评审
doi:10.3390/genes9080377
更新日期:2018-07-27 00:00:00
abstract::The MinION sequencer has made in situ sequencing feasible in remote locations. Following our initial demonstration of its high performance off planet with Earth-prepared samples, we developed and tested an end-to-end, sample-to-sequencer process that could be conducted entirely aboard the International Space Station (...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes11010076
更新日期:2020-01-09 00:00:00
abstract::In this study, we aim to characterize the genetic environment of the plasmid-mediated colistin resistance gene mcr-1 in 25 Escherichia coli and seven Klebsiella pneumoniae strains from different countries and continents. Multilocus sequence typing, conjugation experiments, plasmid typing, and the presence and location...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes8120394
更新日期:2017-12-19 00:00:00
abstract::Alterations in the tumor suppressor phosphatase and tensin homolog (PTEN) occur in a substantial proportion of solid tumors. These events drive tumorigenesis and tumor progression. Given its central role as a downregulator of the phosphoinositide 3-kinase (PI3K)/Akt/mammalian target of rapamycin (mTOR) pathway, PTEN i...
journal_title:Genes
pub_type: 杂志文章,评审
doi:10.3390/genes11070719
更新日期:2020-06-28 00:00:00
abstract::Histone modifications are important in regulating gene expression in eukaryotes. Of the numerous histone modifications which have been identified, acetylation is one of the best characterised and is generally associated with active genes. Histone acetylation can directly affect chromatin structure by neutralising char...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes3020320
更新日期:2012-05-29 00:00:00
abstract::Excessive fat deposition in the hepatocytes, associated with excess dietary fat intake, was related to the occurrence of fatty livers in fish. miR-101b plays the important roles in controlling lipid metabolism, but the underlying mechanism at the post-transcriptional level remains unclear. The purpose of this study is...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes11080861
更新日期:2020-07-29 00:00:00
abstract::Plant genomes generated by Sanger and Next Generation Sequencing (NGS) have provided insight into species diversity and evolution. However, Sanger sequencing is limited in its applications due to high cost, labor intensity, and low throughput, while NGS reads are too short to resolve abundant repeats and polyploidy, l...
journal_title:Genes
pub_type: 杂志文章,评审
doi:10.3390/genes9010006
更新日期:2017-12-28 00:00:00
abstract::During the evolution of heteromorphic sex chromosomes, the sex-specific Y chromosome degenerates, while the X chromosome evolves new mechanisms of regulation. Using bioinformatic and experimental approaches, we investigate the expression of the X chromosome in Drosophila melanogaster. We observe nearly complete X chro...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes9050242
更新日期:2018-05-04 00:00:00
abstract::It is well established that embryonic chromosomal abnormalities (both in the number of chromosomes and the structure) account for 50% of early pregnancy losses. However, little is known regarding the potential differences in the incidence and distribution of chromosomal abnormalities between patients with sporadic abo...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes12020141
更新日期:2021-01-22 00:00:00
abstract::We studied and compared the nucleolar expression or nucleoli from specific bivalents in spermatocytes of the standard Mus musculus domesticus 2n=40, of Robertsonian (Rb) homozygotes 2n = 24 and heterozygotes 2n = 32. We analyzed 200 nuclear microspreads of each specific nucleolar chromosome and spermatocyte karyotype,...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes10020120
更新日期:2019-02-06 00:00:00
abstract::Illumina and nanopore sequencing technologies are powerful tools that can be used to determine the bacterial composition of complex microbial communities. In this study, we compared nasal microbiota results at genus level using both Illumina and nanopore 16S rRNA gene sequencing. We also monitored the progression of n...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes11091105
更新日期:2020-09-21 00:00:00
abstract::Tetralin (1,2,3,4-tetrahydonaphthalene) is a recalcitrant compound that consists of an aromatic and an alicyclic ring. It is found in crude oils, produced industrially from naphthalene or anthracene, and widely used as an organic solvent. Its toxicity is due to the alteration of biological membranes by its hydrophobic...
journal_title:Genes
pub_type: 杂志文章,评审
doi:10.3390/genes10050339
更新日期:2019-05-06 00:00:00
abstract::Silver-Russell syndrome (SRS) is a rare growth-related genetic disorder that is mainly associated with prenatal and postnatal growth retardation. Molecular causes are not clear in all cases, the most common ones being loss of methylation on chromosome 11p15 (≈50%) and maternal uniparental disomy for chromosome 7 (upd(...
journal_title:Genes
pub_type:
doi:10.3390/genes11121461
更新日期:2020-12-05 00:00:00
abstract::Brycon is an important group of Neotropical fish and the principal genus of the family Bryconidae, with 44 valid species that are found in some Central American rivers and practically all the major hydrographic basins of South America. These fish are medium to large in size, migratory, omnivorous, important seed dispe...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes10090639
更新日期:2019-08-23 00:00:00
abstract::Hypertrophic cardiomyopathy associated with damaging variants in the ALPK3 gene is a fairly recent discovery, and only a small number of patients have been described thus far. Here we present two additional patients with hypertrophic cardiomyopathy caused by biallelic variants in ALPK3. Genetic investigation was perfo...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes11101201
更新日期:2020-10-15 00:00:00
abstract::Aging is a complex multi-layered phenomenon. The study of aging in humans is based on the use of biological material from hard-to-gather tissues and highly specific cohorts. The introduction of cell reprogramming techniques posed promising features for medical practice and basic research. Recently, a growing number of...
journal_title:Genes
pub_type: 杂志文章,评审
doi:10.3390/genes9010039
更新日期:2018-01-16 00:00:00
abstract::For medical genetic counseling, estimating the chance of a child being born with chromosome abnormality is crucially important. Cytogenetic diagnostics of parents with a balanced karyotype are a special case. Such chromosome rearrangements cannot be detected with comprehensive chromosome screening. In the current pape...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes11121511
更新日期:2020-12-17 00:00:00
abstract::Network medicine relies on different types of networks: from the molecular level of protein⁻protein interactions to gene regulatory network and correlation studies of gene expression. Among network approaches based on the analysis of the topological properties of protein⁻protein interaction (PPI) networks, we discuss ...
journal_title:Genes
pub_type: 杂志文章,评审
doi:10.3390/genes9090437
更新日期:2018-08-31 00:00:00
abstract::The facultative aerobic bacterium Escherichia coli adjusts its cell cycle to environmental conditions. Because of its lifestyle, the bacterium has to balance the use of oxygen with the potential lethal effects of its poisonous derivatives. Oxidative damages perpetrated by molecules such as hydrogen peroxide and supero...
journal_title:Genes
pub_type: 杂志文章,评审
doi:10.3390/genes9110565
更新日期:2018-11-21 00:00:00
abstract::In this work, we have shown that Novosphingobium tardaugens NBRC 16725 (strain ARI-1), a bacterial strain that was isolated due to its capacity to mineralize the estrogenic endocrine compound 17β-estradiol, is also able to mineralize testosterone, the androgenic endocrine compound. Using in silico analysis, we predict...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes10110871
更新日期:2019-10-31 00:00:00
abstract::The grizzly bear (Ursus arctos ssp. horribilis) represents the largest population of brown bears in North America. Its genome was sequenced using a microfluidic partitioning library construction technique, and these data were supplemented with sequencing from a nanopore-based long read platform. The final assembly was...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes9120598
更新日期:2018-11-30 00:00:00
abstract::Limb-girdle muscular dystrophies (LGMD) are clinically and genetically heterogeneous conditions, presenting with a wide clinical spectrum, leading to progressive proximal weakness caused by loss of muscle fibers. MiR-206 is a member of myomiRNAs, a group of miRNAs with important function in skeletal muscle. Our aim is...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes12010085
更新日期:2021-01-12 00:00:00
abstract::We report the development of a multigene gene expression assay on the BioMark HD platform for the evaluation of immune competence (ImCom) in farmed Atlantic salmon. The first version of the assay included 92 genes selected on the basis of transcriptome analyses in 54 trials that challenged the immune system; annotatio...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes11111236
更新日期:2020-10-22 00:00:00
abstract::Golgi reassembly and stacking protein (GRASP) is required for polysaccharide secretion and virulence in Cryptococcus neoformans. In fungal species, extracellular vesicles (EVs) participate in the export of polysaccharides, proteins and RNA. In the present work, we investigated if EV-mediated RNA export is functionally...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes9080400
更新日期:2018-08-08 00:00:00
abstract::Mutations affecting the Retinitis Pigmentosa GTPase Regulator (RPGR) gene are the commonest cause of X-linked and recessive retinitis pigmentosa (RP), accounting for 10%-20% of all cases of RP. The phenotype is one of the most severe amongst all causes of RP, characteristic for its early onset and rapid progression to...
journal_title:Genes
pub_type: 杂志文章,评审
doi:10.3390/genes10090674
更新日期:2019-09-04 00:00:00
abstract::Ehlers-Danlos syndrome (EDS) comprises clinically heterogeneous connective tissue disorders with diverse molecular etiologies. The 2017 International Classification for EDS recognized 13 distinct subtypes caused by pathogenic variants in 19 genes mainly encoding fibrillar collagens and collagen-modifying or processing...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes10020135
更新日期:2019-02-12 00:00:00
abstract::Horses have been studied for exercise function rather than food production, unlike most livestock. Therefore, the role and characteristics of tissue landscapes are critically understudied, except for certain muscles used in exercise-related studies. In the present study, we compared RNA-Seq data from 18 Jeju horse ske...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes11111359
更新日期:2020-11-17 00:00:00
abstract::Propionibacteria have been studied extensively since the early 1930s due to their relevance to industry and importance as human pathogens. Still, their unique metabolism is far from fully understood. This is partly due to their signature high GC content, which has previously hampered the acquisition of quality sequenc...
journal_title:Genes
pub_type: 杂志文章
doi:10.3390/genes11101115
更新日期:2020-09-23 00:00:00