CircRNA-006258 Sponge-Adsorbs miR-574-5p to Regulate Cell Growth and Milk Synthesis via EVI5L in Goat Mammary Epithelial Cells.

Abstract:

:The development of the udder and the milk yield are closely related to the number and vitality of mammary epithelial cells. Many previous studies have proved that non-coding RNAs (ncRNAs) are widely involved in mammary gland development and the physiological activities of lactation. Our laboratory previous sequencing data revealed that miR-574-5p was differentially expressed during the colostrum and peak lactation stages, while the molecular mechanism of the regulatory effect of miR-574-5p on goat mammary epithelial cells (GMECs) is unclear. In this study, the targeting relationship was detected between miR-574-5p or ecotropic viral integration site 5-like (EVI5L) and circRNA-006258. The results declared that miR-574-5p induced the down-regulation of EVI5L expression at both the mRNA and protein levels, while circRNA-006258 relieved the inhibitory effect through adsorbing miR-574-5p. EVI5L blocked the G1 phase and promoted the S phase by activating the Rab23/ITGB1/TIAM1/Rac1-TGF-β/Smad pathway in GMECs. By increasing the protein expression of Bcl2 and reducing the protein expression of Bax, EVI5L promoted cell growth and inhibited apoptosis. The activation of the PI3K/AKT-mTOR signaling pathway promoted the production of triacylglycerol (TAG) and β-casein in GMECs. The circRNA-006258/miR-574-5p/EVI5L axis could regulate the cell growth and milk synthesis of GMECs by sponge-adsorbed miR-574-5p. These results would provide scientific evidence for precision animal breeding in the industry of dairy goats.

journal_name

Genes (Basel)

journal_title

Genes

authors

Zhang M,Ma L,Liu Y,He Y,Li G,An X,Cao B

doi

10.3390/genes11070718

subject

Has Abstract

pub_date

2020-06-28 00:00:00

issue

7

issn

2073-4425

pii

genes11070718

journal_volume

11

pub_type

杂志文章

相关文献

Genes文献大全
  • Factors behind junk DNA in bacteria.

    abstract::Although bacterial genomes have been traditionally viewed as being very compact, with relatively low amounts of repetitive and non-coding DNA, this view has dramatically changed in recent years. The increase of available complete bacterial genomes has revealed that many species present abundant repetitive DNA (i.e., i...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes3040634

    authors: Gil R,Latorre A

    更新日期:2012-10-12 00:00:00

  • Novel PIGT Variant in Two Brothers: Expansion of the Multiple Congenital Anomalies-Hypotonia Seizures Syndrome 3 Phenotype.

    abstract::Biallelic PIGT variants were previously reported in seven patients from three families with Multiple Congenital Anomalies-Hypotonia Seizures Syndrome 3 (MCAHS3), characterized by epileptic encephalopathy, hypotonia, global developmental delay/intellectual disability, cerebral and cerebellar atrophy, craniofacial dysmo...

    journal_title:Genes

    pub_type:

    doi:10.3390/genes7120108

    authors: Skauli N,Wallace S,Chiang SC,Barøy T,Holmgren A,Stray-Pedersen A,Bryceson YT,Strømme P,Frengen E,Misceo D

    更新日期:2016-11-29 00:00:00

  • In Vitro Fertilisation (IVF) Associated with Preimplantation Genetic Testing for Monogenic Diseases (PGT-M) in a Romanian Carrier Couple for Congenital Disorder of Glycosylation Type Ia (CDG-Ia): A Case Report.

    abstract::Background: Congenital disorder of glycosylation (CDG) is a severe morphogenic and metabolic disorder that affects all of the systems of organs and is caused by a mutation of the gene PMM2, having a mortality rate of 20% during the first months of life. Results: Here we report the outcome of an in vitro fertilisation ...

    journal_title:Genes

    pub_type:

    doi:10.3390/genes11060697

    authors: Doroftei B,Nemtanu L,Ilie OD,Simionescu G,Ivanov I,Anton E,Puiu M,Maftei R

    更新日期:2020-06-25 00:00:00

  • Viral Vector-Mediated Antisense Therapy for Genetic Diseases.

    abstract::RNA plays complex roles in normal health and disease and is becoming an important target for therapeutic intervention; accordingly, therapeutic strategies that modulate RNA function have gained great interest over the past decade. Antisense oligonucleotides (AOs) are perhaps the most promising strategy to modulate RNA...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes8020051

    authors: Imbert M,Dias-Florencio G,Goyenvalle A

    更新日期:2017-01-26 00:00:00

  • Multi-Trait Genomic Prediction of Yield-Related Traits in US Soft Wheat under Variable Water Regimes.

    abstract::The performance of genomic prediction (GP) on genetically correlated traits can be improved through an interdependence multi-trait model under a multi-environment context. In this study, a panel of 237 soft facultative wheat (Triticumaestivum L.) lines was evaluated to compare single- and multi-trait models for predic...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11111270

    authors: Guo J,Khan J,Pradhan S,Shahi D,Khan N,Avci M,Mcbreen J,Harrison S,Brown-Guedira G,Murphy JP,Johnson J,Mergoum M,Esten Mason R,Ibrahim AMH,Sutton R,Griffey C,Babar MA

    更新日期:2020-10-28 00:00:00

  • Selection of Suitable Reference Genes for RT-qPCR Gene Expression Analysis in Siberian Wild Rye (Elymus sibiricus) under Different Experimental Conditions.

    abstract::Elymus sibiricus, which is a perennial and self-pollinated grass, is the typical species of the genus Elymus, which plays an important role in forage production and ecological restoration. No reports have, so far, systematically described the selection of optimal reference genes for reverse transcriptase quantitative ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10060451

    authors: Zhang J,Xie W,Yu X,Zhang Z,Zhao Y,Wang N,Wang Y

    更新日期:2019-06-13 00:00:00

  • Exome-Wide Analysis of the DiscovEHR Cohort Reveals Novel Candidate Pharmacogenomic Variants for Clinical Pharmacogenomics.

    abstract::Recent advances in next-generation sequencing technology have led to the production of an unprecedented volume of genomic data, thus further advancing our understanding of the role of genetic variation in clinical pharmacogenomics. In the present study, we used whole exome sequencing data from 50,726 participants, as ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11050561

    authors: Pandi MT,Williams MS,van der Spek P,Koromina M,Patrinos GP

    更新日期:2020-05-18 00:00:00

  • Coordinated Activity of Transcriptional Networks Responding to the Pattern of Action Potential Firing in Neurons.

    abstract::Transcriptional responses to the appropriate temporal pattern of action potential firing are essential for long-term adaption of neuronal properties to the functional activity of neural circuits and environmental experience. However, standard transcriptome analysis methods can be too limited in identifying critical as...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10100754

    authors: Iacobas DA,Iacobas S,Lee PR,Cohen JE,Fields RD

    更新日期:2019-09-26 00:00:00

  • Impact of HVT Vaccination on Splenic miRNA Expression in Marek's Disease Virus Infections.

    abstract::Marek's Disease is a lymphoproliferative disease of chickens caused by Marek's Disease Virus. Similar to other herpesviruses, Marek's Disease Virus (MDV) encodes its own small non-coding regulatory RNAs termed microRNAs (miRNAs). We previously found that the expression profile of these viral miRNAs is affected by vacc...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10020115

    authors: Hicks JA,Liu HC

    更新日期:2019-02-05 00:00:00

  • Pipeline for the Rapid Development of Cytogenetic Markers Using Genomic Data of Related Species.

    abstract::Repetitive DNA including tandem repeats (TRs) is a significant part of most eukaryotic genomes. TRs include rapidly evolving satellite DNA (satDNA) that can be shared by closely related species, their abundance may be associated with evolutionary divergence, and they have been widely used for chromosome karyotyping us...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10020113

    authors: Kroupin P,Kuznetsova V,Romanov D,Kocheshkova A,Karlov G,Dang TX,Khuat TML,Kirov I,Alexandrov O,Polkhovskiy A,Razumova O,Divashuk M

    更新日期:2019-02-01 00:00:00

  • Sequence Composition Underlying Centromeric and Heterochromatic Genome Compartments of the Pacific Oyster Crassostrea gigas.

    abstract::Segments of the genome enriched in repetitive sequences still present a challenge and are omitted in genome assemblies. For that reason, the exact composition of DNA sequences underlying the heterochromatic regions and the active centromeres are still unexplored for many organisms. The centromere is a crucial region o...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11060695

    authors: Tunjić Cvitanić M,Vojvoda Zeljko T,Pasantes JJ,García-Souto D,Gržan T,Despot-Slade E,Plohl M,Šatović E

    更新日期:2020-06-24 00:00:00

  • Drosophila Interspecific Hybridization Causes A Deregulation of the piRNA Pathway Genes.

    abstract::Almost all eukaryotes have transposable elements (TEs) against which they have developed defense mechanisms. In the Drosophila germline, the main transposable element (TE) regulation pathway is mediated by specific Piwi-interacting small RNAs (piRNAs). Nonetheless, for unknown reasons, TEs sometimes escape cellular co...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11020215

    authors: Gámez-Visairas V,Romero-Soriano V,Martí-Carreras J,Segarra-Carrillo E,García Guerreiro MP

    更新日期:2020-02-19 00:00:00

  • Two New Cases of Hypertrophic Cardiomyopathy and Skeletal Muscle Features Associated with ALPK3 Homozygous and Compound Heterozygous Variants.

    abstract::Hypertrophic cardiomyopathy associated with damaging variants in the ALPK3 gene is a fairly recent discovery, and only a small number of patients have been described thus far. Here we present two additional patients with hypertrophic cardiomyopathy caused by biallelic variants in ALPK3. Genetic investigation was perfo...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11101201

    authors: Jorholt J,Formicheva Y,Vershinina T,Kiselev A,Muravyev A,Demchenko E,Fedotov P,Zlotina A,Rygkov A,Vasichkina E,Sejersen T,Kostareva A

    更新日期:2020-10-15 00:00:00

  • Functional Haplotype of LIPC Induces Triglyceride-Mediated Suppression of HDL-C Levels According to Genome-Wide Association Studies.

    abstract::Hepatic lipase (encoded by LIPC) is a glycoprotein in the triacylglycerol lipase family and mainly synthesized in and secreted from the liver. Previous studies demonstrated that hepatic lipase is crucial for reverse cholesterol transport and modulating metabolism and the plasma levels of several lipoproteins. This stu...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes12020148

    authors: Liao YH,Er LK,Wu S,Ko YL,Teng MS

    更新日期:2021-01-22 00:00:00

  • Allelic imbalances in radiation-associated acute myeloid leukemia.

    abstract::Acute myeloid leukemia (AML) can develop as a secondary malignancy following radiotherapy, but also following low-dose environmental or occupational radiation exposure. Therapy-related AML frequently carries deletions of chromosome 5q and/or 7, but for low-dose exposure associated AML this has not been described. For ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes2020384

    authors: Klymenko SV,Smida J,Atkinson MJ,Bebeshko VG,Nathrath M,Rosemann M

    更新日期:2011-05-31 00:00:00

  • Genetic Variation and Hybridisation among Eight Species of kōwhai (Sophora: Fabaceae) from New Zealand Revealed by Microsatellite Markers.

    abstract::We analysed nine microsatellite markers for 626 individuals representing the geographic range of eight closely related endemic New Zealand species of Sophora. Structure analysis identified the optimal K value as seven, with samples identified as Sophorachathamica, Sophorafulvida, Sophoralongicarinata, and Sophoraprost...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes9020111

    authors: Heenan P,Mitchell C,Houliston G

    更新日期:2018-02-20 00:00:00

  • Identification of a Novel Imprinted Transcript in the Porcine GNAS Complex Locus Using Methylome and Transcriptome of Parthenogenetic Fetuses.

    abstract::Genomic imprinting in domestic animals contributes to the variance of performance traits. However, research remains to be done on large-scale detection of epigenetic landscape of porcine imprinted loci including the GNAS complex locus. The purpose of this study was to generate porcine parthenogenetic fetuses and compr...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11010096

    authors: Ahn J,Wu H,Lee J,Hwang IS,Yu D,Ahn JS,Lee JW,Hwang S,Lee K

    更新日期:2020-01-14 00:00:00

  • Computational Strategies for Scalable Genomics Analysis.

    abstract::The revolution in next-generation DNA sequencing technologies is leading to explosive data growth in genomics, posing a significant challenge to the computing infrastructure and software algorithms for genomics analysis. Various big data technologies have been explored to scale up/out current bioinformatics solutions ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10121017

    authors: Shi L,Wang Z

    更新日期:2019-12-06 00:00:00

  • Novel Insights into the Protective Properties of ACTH(4-7)PGP (Semax) Peptide at the Transcriptome Level Following Cerebral Ischaemia-Reperfusion in Rats.

    abstract::Cerebral ischaemia is the most common cause of impaired brain function. Biologically active peptides represent potential drugs for reducing the damage that occurs after ischaemia. The synthetic melanocortin derivative, ACTH(4-7)PGP (Semax), has been used successfully in the treatment of patients with severe impairment...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11060681

    authors: Filippenkov IB,Stavchansky VV,Denisova AE,Yuzhakov VV,Sevan'kaeva LE,Sudarkina OY,Dmitrieva VG,Gubsky LV,Myasoedov NF,Limborska SA,Dergunova LV

    更新日期:2020-06-22 00:00:00

  • Links between DNA Replication, Stem Cells and Cancer.

    abstract::Cancers can be categorized into two groups: those whose frequency increases with age, and those resulting from errors during mammalian development. The first group is linked to DNA replication through the accumulation of genetic mutations that occur during proliferation of developmentally acquired stem cells that give...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes8020045

    authors: Vassilev A,DePamphilis ML

    更新日期:2017-01-25 00:00:00

  • Gene Expression Profile in Similar Tissues Using Transcriptome Sequencing Data of Whole-Body Horse Skeletal Muscle.

    abstract::Horses have been studied for exercise function rather than food production, unlike most livestock. Therefore, the role and characteristics of tissue landscapes are critically understudied, except for certain muscles used in exercise-related studies. In the present study, we compared RNA-Seq data from 18 Jeju horse ske...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11111359

    authors: Lee HY,Kim JY,Kim KH,Jeong S,Cho Y,Kim N

    更新日期:2020-11-17 00:00:00

  • Hair of the Dog: Identification of a Cis-Regulatory Module Predicted to Influence Canine Coat Composition.

    abstract::Each domestic dog breed is characterized by a strict set of physical and behavioral characteristics by which breed members are judged and rewarded in conformation shows. One defining feature of particular interest is the coat, which is comprised of either a double- or single-layer of hair. The top coat contains coarse...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10050323

    authors: Whitaker DT,Ostrander EA

    更新日期:2019-04-26 00:00:00

  • The Effect of Tobacco Smoking Differs across Indices of DNA Methylation-Based Aging in an African American Sample: DNA Methylation-Based Indices of Smoking Capture These Effects.

    abstract::Smoking is one of the leading preventable causes of morbidity and mortality worldwide, prompting interest in its association with DNA methylation-based measures of biological aging. Considerable progress has been made in developing DNA methylation-based measures that correspond to self-reported smoking status. In addi...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11030311

    authors: Lei MK,Gibbons FX,Simons RL,Philibert RA,Beach SRH

    更新日期:2020-03-14 00:00:00

  • Genome-Wide Identification of lncRNAs During Rice Seed Development.

    abstract::Rice seed is a pivotal reproductive organ that directly determines yield and quality. Long non-coding RNAs (lncRNAs) have been recognized as key regulators in plant development, but the roles of lncRNAs in rice seed development remain unclear. In this study, we performed a paired-end RNA sequencing in samples of rice ...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11030243

    authors: Zhao J,Ajadi AA,Wang Y,Tong X,Wang H,Tang L,Li Z,Shu Y,Liu X,Li S,Wang S,Liu W,Zhang J

    更新日期:2020-02-26 00:00:00

  • Comparative Genomics and Evolutionary Analysis of RNA-Binding Proteins of Burkholderia cenocepacia J2315 and Other Members of the B. cepacia Complex.

    abstract::RNA-binding proteins (RBPs) are important regulators of cellular functions, playing critical roles on the survival of bacteria and in the case of pathogens, on their interaction with the host. RBPs are involved in transcriptional, post-transcriptional, and translational processes. However, except for model organisms l...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11020231

    authors: Feliciano JR,Seixas AMM,Pita T,Leitão JH

    更新日期:2020-02-21 00:00:00

  • DNA Damage Repair System in Plants: A Worldwide Research Update.

    abstract::Living organisms are usually exposed to various DNA damaging agents so the mechanisms to detect and repair diverse DNA lesions have developed in all organisms with the result of maintaining genome integrity. Defects in DNA repair machinery contribute to cancer, certain diseases, and aging. Therefore, conserving the ge...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes8110299

    authors: Gimenez E,Manzano-Agugliaro F

    更新日期:2017-10-30 00:00:00

  • Horizontally Acquired Homologs of Xenogeneic Silencers: Modulators of Gene Expression Encoded by Plasmids, Phages and Genomic Islands.

    abstract::Acquisition of mobile elements by horizontal gene transfer can play a major role in bacterial adaptation and genome evolution by providing traits that contribute to bacterial fitness. However, gaining foreign DNA can also impose significant fitness costs to the host bacteria and can even produce detrimental effects. T...

    journal_title:Genes

    pub_type: 杂志文章,评审

    doi:10.3390/genes11020142

    authors: Piña-Iturbe A,Suazo ID,Hoppe-Elsholz G,Ulloa-Allendes D,González PA,Kalergis AM,Bueno SM

    更新日期:2020-01-29 00:00:00

  • Two Separate Cases: Complex Chromosomal Abnormality Involving Three Chromosomes and Small Supernumerary Marker Chromosome in Patients with Impaired Reproductive Function.

    abstract::For medical genetic counseling, estimating the chance of a child being born with chromosome abnormality is crucially important. Cytogenetic diagnostics of parents with a balanced karyotype are a special case. Such chromosome rearrangements cannot be detected with comprehensive chromosome screening. In the current pape...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes11121511

    authors: Karamysheva TV,Gayner TA,Muzyka VV,Orishchenko KE,Rubtsov NB

    更新日期:2020-12-17 00:00:00

  • Identification of Loci Controlling the Dwarfism Trait in the White Sailfin Molly (Poecilia latipinna) Using Genome-Wide Association Studies Based on Genotyping-By-Sequencing.

    abstract::Dwarfism is a condition defined by low harvest weight in fish, but also results in strange body figures which may have potential for the selective breeding of new ornamental fish strains. The objectives of this study are to reveal the physiological causes of dwarfism and identify the genetic loci controlling this trai...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10060418

    authors: Shao F,Liu J,Ren M,Li J,Bao H,Wu C

    更新日期:2019-05-30 00:00:00

  • The Genomic Makeup of Nine Horse Populations Sampled in the Netherlands.

    abstract::The spectrum of modern horse populations encompasses populations with a long history of development in isolation and relatively recently formed types. To increase our understanding of the evolutionary history and provide information on how to optimally conserve or improve these populations with varying development and...

    journal_title:Genes

    pub_type: 杂志文章

    doi:10.3390/genes10060480

    authors: Schurink A,Shrestha M,Eriksson S,Bosse M,Bovenhuis H,Back W,Johansson AM,Ducro BJ

    更新日期:2019-06-25 00:00:00