Abstract:
:Histone H2AX and MDC1 are key DNA repair and DNA-damage signalling proteins. When DNA double-strand breaks (DSBs) occur, H2AX is phosphorylated and then recruits MDC1, which in turn serves as a docking platform to promote the localization of other factors, including 53BP1, to DSB sites. Here, by using CRISPR-Cas9 engineered human cell lines, we identify a hitherto unknown, H2AX-independent, function of MDC1 mediated by its PST-repeat region. We show that the PST-repeat region directly interacts with chromatin via the nucleosome acidic patch and mediates DNA damage-independent association of MDC1 with chromatin. We find that this region is largely functionally dispensable when the canonical γH2AX-MDC1 pathway is operative but becomes critical for 53BP1 recruitment to DNA-damage sites and cell survival following DSB induction when H2AX is not available. Consequently, our results suggest a role for MDC1 in activating the DDR in areas of the genome lacking or depleted of H2AX.
journal_name
Nat Communjournal_title
Nature communicationsauthors
Salguero I,Belotserkovskaya R,Coates J,Sczaniecka-Clift M,Demir M,Jhujh S,Wilson MD,Jackson SPdoi
10.1038/s41467-019-12929-5subject
Has Abstractpub_date
2019-11-15 00:00:00pages
5191issue
1issn
2041-1723pii
10.1038/s41467-019-12929-5journal_volume
10pub_type
杂志文章abstract::Transthyretin (TTR) is a plasma homotetrameric protein implicated in fatal systemic amyloidoses. TTR tetramer dissociation precedes pathological TTR aggregation. Native state stabilizers are promising drugs to treat TTR amyloidoses. Here we repurpose tolcapone, an FDA-approved molecule for Parkinson's disease, as a po...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms10787
更新日期:2016-02-23 00:00:00
abstract::From intracellular protein trafficking to large-scale motion of animal groups, the physical concepts driving the self-organization of living systems are still largely unraveled. Self-organization of active entities, leading to novel phases and emergent macroscopic properties, recently shed new light on these complex d...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-019-13031-6
更新日期:2019-11-08 00:00:00
abstract::Molecular shape recognition for larger guest molecules (typically over 1 nm) is a difficult task because it requires cooperativity within a wide three-dimensional nanospace coincidentally probing every molecular aspect (size, outline shape, flexibility and specific groups). Although the intelligent functions of protei...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms3581
更新日期:2013-01-01 00:00:00
abstract::Breast cancers exhibit genome-wide aberrant DNA methylation patterns. To investigate how these affect the transcriptome and which changes are linked to transformation or progression, we apply genome-wide expression-methylation quantitative trait loci (emQTL) analysis between DNA methylation and gene expression. On a w...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-017-00510-x
更新日期:2017-11-09 00:00:00
abstract::Quantum metrology bears a great promise in enhancing measurement precision, but is unlikely to become practical in the near future. Its concepts can nevertheless inspire classical or hybrid methods of immediate value. Here we demonstrate NOON-like photonic states of m quanta of angular momentum up to m=100, in a setup...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms3432
更新日期:2013-01-01 00:00:00
abstract::In the lead-up to the Cretaceous/Paleogene mass extinction, dinosaur diversity is argued to have been either in long-term decline, or thriving until their sudden demise. The latest Cretaceous (Campanian-Maastrichtian [83-66 Ma]) of North America provides the best record to address this debate, but even here diversity ...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-019-08997-2
更新日期:2019-03-06 00:00:00
abstract::Much of the global annual mean temperature change over Quaternary glacial cycles can be attributed to slow ice sheet and greenhouse gas feedbacks, but analysis of the short-term response to orbital forcings has the potential to reveal key relationships in the climate system. In particular, obliquity and precession bot...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-018-03800-0
更新日期:2018-04-10 00:00:00
abstract::For COVID-19, it is vital to understand if quarantines shorter than 14 days can be equally effective with judiciously deployed testing. Here, we develop a mathematical model that quantifies the probability of post-quarantine transmission incorporating testing into travel quarantine, quarantine of traced contacts with ...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-020-20742-8
更新日期:2021-01-07 00:00:00
abstract::Tumour vessels have been studied extensively as they are critical sites for drug delivery, anti-angiogenic therapies and immunotherapy. As a preclinical tool, intravital microscopy (IVM) allows for in vivo real-time direct observation of vessels at the cellular level. However, to date there are no reports of intravita...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms10684
更新日期:2016-02-17 00:00:00
abstract::Parkinson's disease (PD) and Multiple System Atrophy (MSA) are clinically distinctive diseases that feature a common neuropathological hallmark of aggregated α-synuclein. Little is known about how differences in α-synuclein aggregate structure affect disease phenotype. Here, we amplified α-synuclein aggregates from PD...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-019-13564-w
更新日期:2019-12-04 00:00:00
abstract::Choroidal neovascularization (CNV) is a major cause of visual impairment in patients suffering from wet age-related macular degeneration (AMD), particularly when refractory to intraocular anti-VEGF injections. Here we report that treatment with the oral mineralocorticoid receptor (MR) antagonist spironolactone reduces...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-018-08125-6
更新日期:2019-01-21 00:00:00
abstract::Base excision repair (BER) initiated by alkyladenine DNA glycosylase (AAG) is essential for removal of aberrantly methylated DNA bases. Genome instability and accumulation of aberrant bases accompany multiple diseases, including cancer and neurological disorders. While BER is well studied on naked DNA, it remains uncl...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-019-13394-w
更新日期:2019-11-29 00:00:00
abstract::Pentacyclic triterpenoids (PTs) constitute one of the biggest families of natural products, many with higher oxidation state at the D/E rings possess a wide spectrum of biological activties but are poorly accessible. Here we report a site-selective C-H hydroxylation at the D/E rings of PTs paving a way toward these im...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-020-18138-9
更新日期:2020-09-01 00:00:00
abstract::The preparation of α-functionalized organic acids can be greatly simplified by adopting a protocol involving the catalytic assembly of achiral building blocks. However, the enzymatic assembly of small amino acids and aldehydes to form numerous α-functionalized organic acids is highly desired and remains a significant ...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-018-06241-x
更新日期:2018-09-19 00:00:00
abstract::Mammals have nine different homologues (ALKBH1-9) of the Escherichia coli DNA repair demethylase AlkB. ALKBH2 is a genuine DNA repair enzyme, but the in vivo function of the other ALKBH proteins has remained elusive. It was recently shown that ALKBH8 contains an additional transfer RNA (tRNA) methyltransferase domain,...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms1173
更新日期:2011-02-01 00:00:00
abstract::Developing earth-abundant, active and stable electrocatalysts which operate in the same electrolyte for water splitting, including oxygen evolution reaction and hydrogen evolution reaction, is important for many renewable energy conversion processes. Here we demonstrate the improvement of catalytic activity when trans...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms8261
更新日期:2015-06-23 00:00:00
abstract::Liquid phase separation into two or more coexisting phases has emerged as a new paradigm for understanding subcellular organization, prebiotic life, and the origins of disease. The design principles underlying biomolecular phase separation have the potential to drive the development of novel liquid-based organelles an...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-020-18224-y
更新日期:2020-09-15 00:00:00
abstract::The primary motor cortex has an important role in the precise execution of learned motor responses. During motor learning, synaptic efficacy between sensory and primary motor cortical neurons is enhanced, possibly involving long-term potentiation and N-methyl-D-aspartate (NMDA)-specific glutamate receptor function. To...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms3258
更新日期:2013-01-01 00:00:00
abstract::Bloch electrons lacking inversion symmetry exhibit orbital magnetic moments owing to the rotation around their center of mass; this moment induces a valley splitting in a magnetic field. For the graphene/h-BN moiré superlattice, inversion symmetry is broken by the h-BN. The superlattice potential generates a series of...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-020-19043-x
更新日期:2020-10-23 00:00:00
abstract::Integration of chemical probes into proteomic workflows enables the interrogation of protein activity, rather than abundance. Current methods limit the biological contexts that can be addressed due to sample homogenization, signal-averaging, and bias toward abundant proteins. Here we report a platform that integrates ...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-017-01854-0
更新日期:2017-11-24 00:00:00
abstract::Advances in chemistry and massively parallel detection underlie DNA-sequencing platforms that are poised for application in personalized medicine. In stark contrast, systematic generation of protein-level data lags well behind genomics in virtually every aspect: depth of coverage, throughput, ease of sample preparatio...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms3171
更新日期:2013-01-01 00:00:00
abstract::Despite significant advances in the fabrication and applications of graphene-like materials, it remains a challenge to prepare single-layered metallic materials, which have great potential applications in physics, chemistry and material science. Here we report the fabrication of poly(vinylpyrrolidone)-supported single...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms4093
更新日期:2014-01-01 00:00:00
abstract::Photocatalysis has not found widespread industrial adoption, in spite of decades of active research, because the challenges associated with catalyst illumination and turnover outweigh the touted advantages of replacing heat with light. A demonstration that light can control product selectivity in complex chemical reac...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms14542
更新日期:2017-02-23 00:00:00
abstract::Control of electron spin coherence via external fields is fundamental in spintronics. Its implementation demands a host material that accommodates the desirable but contrasting requirements of spin robustness against relaxation mechanisms and sizeable coupling between spin and orbital motion of the carriers. Here, we ...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms13886
更新日期:2016-12-21 00:00:00
abstract::The high Aβ42/Aβ40 production ratio is a hallmark of familial Alzheimer's disease, which can be caused by mutations in the amyloid precursor protein (APP). The C-terminus of Aβ is generated by γ-secretase cleavage within the transmembrane domain of APP (APPTM), a process that is primed by an initial ε-cleavage at eith...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms4037
更新日期:2014-01-01 00:00:00
abstract::Pattern-triggered immunity and effector-triggered immunity are two primary forms of innate immunity in land plants. The molecular components and connecting nodes of pattern-triggered immunity and effector-triggered immunity are not fully understood. Here, we report that the Arabidopsis calcium-dependent protein kinase...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-020-20007-4
更新日期:2020-12-04 00:00:00
abstract::Terephthalic acid (TPA) is an important industrial chemical currently produced by energy intensive and potentially hazardous p-xylene (pX) oxidation process. Here we report the development of metabolically engineered Escherichia coli system for biological transformation of pX into TPA. The engineered E. coli strain ha...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms15689
更新日期:2017-05-31 00:00:00
abstract::How mixtures of immune cells associate with cancer cell phenotype and affect pathogenesis is still unclear. In 15 breast cancer gene expression datasets, we invariably identify three clusters of patients with gradual levels of immune infiltration. The intermediate immune infiltration cluster (Cluster B) is associated ...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-019-13329-5
更新日期:2019-12-03 00:00:00
abstract::The miR-200 family members have been implicated in stress responses and ovarian tumorigenesis. Here, we find that miR-200c/141 transcription is intimately linked to the transcription of the proximal upstream gene PTPN6 (SHP1) in all physiological conditions tested. PTPN6 and miR-200c/141 are transcriptionally co-regul...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms9959
更新日期:2016-01-04 00:00:00
abstract::Sinc-shaped Nyquist pulses possess a rectangular spectrum, enabling data to be encoded in a minimum spectral bandwidth and satisfying by essence the Nyquist criterion of zero inter-symbol interference (ISI). This property makes them very attractive for communication systems since data transmission rates can be maximiz...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms3898
更新日期:2013-01-01 00:00:00