Identification and characterisation of the novel endogenous promoter HASP1 and its signal peptide from Phaeodactylum tricornutum.

Abstract:

:Although diatoms have been extensively studied as bioreactors, only a limited number of efficient gene promoters are available. Therefore, the development of new endogenous promoters is important for the heterologous production of a variety of recombinant proteins. Herein, we identified the most abundant secreted protein in Phaeodactylum tricornutum, designated 'highly abundant secreted protein 1' (HASP1), and characterised the activities of its promoter and signal peptide using green fluorescent protein (GFP) as a reporter. The HASP1 promoter strongly drove GFP expression during all growth phases of P. tricornutum in culture, in contrast to the commonly used fcpA promoter, which is less active during the stationary phase. The HASP1 signal peptide was also sufficient for facilitating efficient secretion of GFP by P. tricornutum. Our findings suggest that both the promoter and the signal peptide of HASP1 can be utilized as novel tools for the overexpression and secretion of recombinant proteins in P. tricornutum.

journal_name

Sci Rep

journal_title

Scientific reports

authors

Erdene-Ochir E,Shin BK,Kwon B,Jung C,Pan CH

doi

10.1038/s41598-019-45786-9

subject

Has Abstract

pub_date

2019-07-09 00:00:00

pages

9941

issue

1

issn

2045-2322

pii

10.1038/s41598-019-45786-9

journal_volume

9

pub_type

杂志文章
  • Reduced habit-driven errors in Parkinson's Disease.

    abstract::Parkinson's Disease can be understood as a disorder of motor habits. A prediction of this theory is that early stage Parkinson's patients will display fewer errors caused by interference from previously over-learned behaviours. We test this prediction in the domain of skilled typing, where actions are easy to record a...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-39294-z

    authors: Bannard C,Leriche M,Bandmann O,Brown CH,Ferracane E,Sánchez-Ferro Á,Obeso J,Redgrave P,Stafford T

    更新日期:2019-03-04 00:00:00

  • Hybrid surgery versus anterior cervical discectomy and fusion for multilevel cervical degenerative disc diseases: a meta-analysis.

    abstract::The objective of this meta-analysis is to compare hybrid surgery (HS) and cervical discectomy and fusion (ACDF) for multilevel cervical degenerative disc diseases (DDD). Systematic searches of all published studies through March 2015 were identified from Cochrane Library, Medline, PubMed, Embase, ScienceDirect, CNKI, ...

    journal_title:Scientific reports

    pub_type: 杂志文章,meta分析,评审

    doi:10.1038/srep13454

    authors: Tian P,Fu X,Li ZJ,Sun XL,Ma XL

    更新日期:2015-08-26 00:00:00

  • Enhanced Bandwidth of High Directive Emission Fabry-Perot Resonator Antenna with Tapered Near-Zero Effective Index Using Metasurface.

    abstract::In this paper, a novel explanation on high directive emission of Fabry-Perot resonator antenna with subwavelength metasurface is proposed. Based on image theory and effective constitutive parameter retrieval, the whole Fabry-Perot resonant cavity structure composed of a single-layer metasurface with square ring elemen...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-11141-z

    authors: Liu ZG,Lu WB,Yang W

    更新日期:2017-09-13 00:00:00

  • Serum alpha-mannosidase as an additional barrier to eliciting oligomannose-specific HIV-1-neutralizing antibodies.

    abstract::Oligomannose-type glycans on HIV-1 gp120 form a patch that is targeted by several broadly neutralizing antibodies (bnAbs) and that therefore is of interest to vaccine design. However, attempts to elicit similar oligomannose-specific bnAbs by immunizing with oligomannosidic glycoconjugates have only been modestly succe...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-64500-8

    authors: Bruxelle JF,Kirilenko T,Qureshi Q,Lu N,Trattnig N,Kosma P,Pantophlet R

    更新日期:2020-05-05 00:00:00

  • Determination and correction of persistent biases in quantum annealers.

    abstract::Calibration of quantum computers is essential to the effective utilisation of their quantum resources. Specifically, the performance of quantum annealers is likely to be significantly impaired by noise in their programmable parameters, effectively misspecification of the computational problem to be solved, often resul...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep18628

    authors: Perdomo-Ortiz A,O'Gorman B,Fluegemann J,Biswas R,Smelyanskiy VN

    更新日期:2016-01-19 00:00:00

  • Colorectal cancer risk genes are functionally enriched in regulatory pathways.

    abstract::Colorectal cancer (CRC) is a common complex disease caused by the combination of genetic variants and environmental factors. Genome-wide association studies (GWAS) have been performed and reported some novel CRC susceptibility variants. However, the potential genetic mechanisms for newly identified CRC susceptibility ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep25347

    authors: Lu X,Cao M,Han S,Yang Y,Zhou J

    更新日期:2016-05-05 00:00:00

  • Frequency and Phase Characteristics of Candle Flame Oscillation.

    abstract::The combustion of candles exhibits a variety of dynamical behaviors. Binding several candles together will result in flickering of candle flames, which is generally described as a nonlinear oscillator. The impact on the frequency of the flame by several factors, such as the arrangement, the number and the asymmetry of...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-36754-w

    authors: Chen T,Guo X,Jia J,Xiao J

    更新日期:2019-01-23 00:00:00

  • A library of chemically defined human N-glycans synthesized from microbial oligosaccharide precursors.

    abstract::Synthesis of homogenous glycans in quantitative yields represents a major bottleneck to the production of molecular tools for glycoscience, such as glycan microarrays, affinity resins, and reference standards. Here, we describe a combined biological/enzymatic synthesis that is capable of efficiently converting microbi...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-15891-8

    authors: Hamilton BS,Wilson JD,Shumakovich MA,Fisher AC,Brooks JC,Pontes A,Naran R,Heiss C,Gao C,Kardish R,Heimburg-Molinaro J,Azadi P,Cummings RD,Merritt JH,DeLisa MP

    更新日期:2017-11-21 00:00:00

  • Brain hubs in lesion models: Predicting functional network topology with lesion patterns in patients.

    abstract::Various important topological properties of healthy brain connectome have recently been identified. However, the manner in which brain lesion changes the functional network topology is unknown. We examined how critical specific brain areas are in the maintenance of network topology using multivariate support vector re...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-17886-x

    authors: Yuan B,Fang Y,Han Z,Song L,He Y,Bi Y

    更新日期:2017-12-20 00:00:00

  • Vanillic acid from Actinidia deliciosa impedes virulence in Serratia marcescens by affecting S-layer, flagellin and fatty acid biosynthesis proteins.

    abstract::Serratia marcescens is one of the important nosocomial pathogens which rely on quorum sensing (QS) to regulate the production of biofilm and several virulence factors. Hence, blocking of QS has become a promising approach to quench the virulence of S. marcescens. For the first time, QS inhibitory (QSI) and antibiofilm...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-16507-x

    authors: Sethupathy S,Ananthi S,Selvaraj A,Shanmuganathan B,Vigneshwari L,Balamurugan K,Mahalingam S,Pandian SK

    更新日期:2017-11-27 00:00:00

  • A combination of serum iron, ferritin and transferrin predicts outcome in patients with intracerebral hemorrhage.

    abstract::Association of a high-serum ferritin with poor outcome showed that iron might play a detrimental role in the brain after intracerebral hemorrhage (ICH). Here, we investigated changes in serum iron, ferritin, transferrin (Tf) and ceruloplasmin (CP) in patients with ICH (n = 100) at day 1 (admission), 3, 7, 14 and 21 an...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep21970

    authors: Yang G,Hu R,Zhang C,Qian C,Luo QQ,Yung WH,Ke Y,Feng H,Qian ZM

    更新日期:2016-02-22 00:00:00

  • Gestation age-associated dynamics of mitochondrial calcium uniporter subunits expression in feto-maternal complex at term and preterm delivery.

    abstract::Calcium plays a role of universal cellular regulator in the living cell and one of the crucial regulators of proper fetal development during gestation. Mitochondria are important for intracellular calcium handling and signaling. Mitochondrial calcium uniporter (mtCU) is a multiprotein complex of the mitochondrial inne...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-41996-3

    authors: Vishnyakova PA,Tarasova NV,Volodina MA,Tsvirkun DV,Sukhanova IA,Kurchakova TA,Kan NE,Medzidova MK,Sukhikh GT,Vysokikh MY

    更新日期:2019-04-02 00:00:00

  • A prediction model of outcome of SARS-CoV-2 pneumonia based on laboratory findings.

    abstract::The severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has resulted in thousands of deaths in the world. Information about prediction model of prognosis of SARS-CoV-2 infection is scarce. We used machine learning for processing laboratory findings of 110 patients with SARS-CoV-2 pneumonia (including 51 non-s...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-71114-7

    authors: Wu G,Zhou S,Wang Y,Lv W,Wang S,Wang T,Li X

    更新日期:2020-08-20 00:00:00

  • Interferon gamma-induced protein 10 is associated with insulin resistance and incident diabetes in patients with nonalcoholic fatty liver disease.

    abstract::Nonalcoholic fatty liver disease (NAFLD) is an important risk factor for the development of type 2 diabetes mellitus. Interferon gamma-induced protein 10 (IP-10), a proinflammatory chemokine, plays a crucial role in inflammatory diseases. This cross-sectional pilot study investigated whether circulating IP-10 is assoc...

    journal_title:Scientific reports

    pub_type: 临床试验,杂志文章,多中心研究

    doi:10.1038/srep10096

    authors: Chang CC,Wu CL,Su WW,Shih KL,Tarng DC,Chou CT,Chen TY,Kor CT,Wu HM

    更新日期:2015-05-11 00:00:00

  • BiVO4-rGO with a novel structure on steel fabric used as high-performance photocatalysts.

    abstract::A high-performance and novel photocatalyst of BiVO4-reduced Graphene Oxide (BiVO4-rGO) nanocomposite was prepared by a facile hydrothermal method. The photocatalyst was characterized by X-ray diffraction, X-ray photoelectron spectroscopy, scanning electron microscopy, transmission electronic microscopy, UV-Vis diffusi...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-07342-1

    authors: Fang D,Li X,Liu H,Xu W,Jiang M,Li W,Fan X

    更新日期:2017-08-11 00:00:00

  • Ambient anthropogenic noise but not light is associated with the ecophysiology of free-living songbird nestlings.

    abstract::Urbanization is associated with dramatic increases in noise and light pollution, which affect animal behaviour, physiology and fitness. However, few studies have examined these stressors simultaneously. Moreover, effects of urbanization during early-life may be detrimental but are largely unknown. In developing great ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-017-02940-5

    authors: Raap T,Pinxten R,Casasole G,Dehnhard N,Eens M

    更新日期:2017-06-05 00:00:00

  • Early postoperative weight gain is associated with increased risk of graft failure in living donor liver transplant recipients.

    abstract::Fluid overload (FO) has been shown to adversely affect multiple organs and survival in critically ill patients. Liver transplantation (LT) carries the risk of massive transfusion, which frequently results in FO. We investigated the association of postoperative weight gain with graft failure, early allograft dysfunctio...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-56543-3

    authors: Jeong HW,Jung KW,Kim SO,Kwon HM,Moon YJ,Jun IG,Song JG,Hwang GS

    更新日期:2019-12-27 00:00:00

  • PPM1D controls nucleolar formation by up-regulating phosphorylation of nucleophosmin.

    abstract::An increase of nucleolar number and size has made nucleoli essential markers for cytology and tumour development. However, the underlying basis for their structural integrity and abundance remains unclear. Protein phosphatase PPM1D was found to be up-regulated in different carcinomas including breast cancers. Here, we...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep33272

    authors: Kozakai Y,Kamada R,Furuta J,Kiyota Y,Chuman Y,Sakaguchi K

    更新日期:2016-09-13 00:00:00

  • Predicting mammalian species at risk of being infected by SARS-CoV-2 from an ACE2 perspective.

    abstract::SARS-CoV-2 can transmit efficiently in humans, but it is less clear which other mammals are at risk of being infected. SARS-CoV-2 encodes a Spike (S) protein that binds to human ACE2 receptor to mediate cell entry. A species with a human-like ACE2 receptor could therefore be at risk of being infected by SARS-CoV-2. We...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-80573-x

    authors: Wei Y,Aris P,Farookhi H,Xia X

    更新日期:2021-01-18 00:00:00

  • Formation environments and mechanisms of multistage paleokarst of Ordovician carbonates in Southern North China Basin.

    abstract::With the reduction of oil and gas reserves and the increase of mining difficulty in Northern China, the carbonate rocks in Southern North China Basin are becoming a significant exploration target for carbonate reservoirs. However, the development characteristics, formation stages, formation environments and mechanisms...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-80878-x

    authors: Zhang H,Xu G,Liu M,Wang M

    更新日期:2021-01-12 00:00:00

  • Multiplexed 3D FRET imaging in deep tissue of live embryos.

    abstract::Current deep tissue microscopy techniques are mostly restricted to intensity mapping of fluorophores, which significantly limit their applications in investigating biochemical processes in vivo. We present a deep tissue multiplexed functional imaging method that probes multiple Förster resonant energy transfer (FRET) ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep13991

    authors: Zhao M,Wan X,Li Y,Zhou W,Peng L

    更新日期:2015-09-21 00:00:00

  • Assessment of physical activity and cognitive function and their potential correlation in convalescent patients of cerebrovascular disease.

    abstract::Physical activity (PA) is known to influence cognitive function. However, the impact of PA on patients with cerebrovascular disease (CVD) has not yet been elucidated. PA and cognitive function have not been measured simultaneously over time, which makes it difficult to evaluate their relationship. The purpose of this ...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-019-40460-6

    authors: Kojima M,Nagano A

    更新日期:2019-03-07 00:00:00

  • T-cell subset abnormalities predict progression along the Inflammatory Arthritis disease continuum: implications for management.

    abstract::The presence of a disease continuum in inflammatory arthritis (IA) is a recognised concept, with distinct stages from at-risk stage (presence of anti citrullinated-peptide autoantibody) to diagnosis of rheumatoid arthritis (RA), including therapy-induced remission. Despite T-cell dysregulation being a key feature of R...

    journal_title:Scientific reports

    pub_type: 临床试验,杂志文章,多中心研究

    doi:10.1038/s41598-020-60314-w

    authors: Ponchel F,Burska AN,Hunt L,Gul H,Rabin T,Parmar R,Buch MH,Conaghan PG,Emery P

    更新日期:2020-02-28 00:00:00

  • High-performance transparent and stretchable all-solid supercapacitors based on highly aligned carbon nanotube sheets.

    abstract::By using highly aligned carbon nanotube (CNT) sheets of excellent optical transmittance and mechanical stretchability as both the current collector and active electrode, high-performance transparent and stretchable all-solid supercapacitors with a good stability were developed. A transmittance up to 75% at the wavelen...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep03612

    authors: Chen T,Peng H,Durstock M,Dai L

    更新日期:2014-01-09 00:00:00

  • Publisher Correction: Syngeneic Mesenchymal Stem Cells Reduce Immune Rejection After Induced Pluripotent Stem Cell-Derived Allogeneic Cardiomyocyte Transplantation.

    abstract::An amendment to this paper has been published and can be accessed via a link at the top of the paper. ...

    journal_title:Scientific reports

    pub_type: 已发布勘误

    doi:10.1038/s41598-020-67129-9

    authors: Yoshida S,Miyagawa S,Toyofuku T,Fukushima S,Kawamura T,Kawamura A,Kashiyama N,Nakamura Y,Toda K,Sawa Y

    更新日期:2020-06-17 00:00:00

  • Enhanced delignification of steam-pretreated poplar by a bacterial laccase.

    abstract::The recalcitrance of woody biomass, particularly its lignin component, hinders its sustainable transformation to fuels and biomaterials. Although the recent discovery of several bacterial ligninases promises the development of novel biocatalysts, these enzymes have largely been characterized using model substrates: di...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep42121

    authors: Singh R,Hu J,Regner MR,Round JW,Ralph J,Saddler JN,Eltis LD

    更新日期:2017-02-07 00:00:00

  • Integrated stress response inhibition provides sex-dependent protection against noise-induced cochlear synaptopathy.

    abstract::Noise-induced hearing loss (NIHL) is a common health concern with significant social, psychological, and cognitive implications. Moderate levels of acoustic overstimulation associated with tinnitus and impaired speech perception cause cochlear synaptopathy, characterized physiologically by reduction in wave I of the s...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-020-75058-w

    authors: Rouse SL,Matthews IR,Li J,Sherr EH,Chan DK

    更新日期:2020-10-22 00:00:00

  • Graded pitch profile for the helicoidal broadband reflector and left-handed circularly polarizing cuticle of the scarab beetle Chrysina chrysargyrea.

    abstract::The cuticle of the beetle Chrysina chrysargyrea reflects left-handed polarized light in the broad spectral range from 340 to 1000 nm. Interference oscillations in the experimental Mueller-matrix spectroscopic ellipsometry data reveal that transparent materials comprise the cuticle. A spectral analysis of the interfere...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/s41598-018-24761-w

    authors: Mendoza-Galván A,Del Río LF,Järrendahl K,Arwin H

    更新日期:2018-04-24 00:00:00

  • Magnetic resonance imaging of brain cell water.

    abstract::In the central nervous system of vertebrates, cell bodies of neurons are often assembled as nuclei or cellular layers that play specific roles as functional units. The purpose of this work was to selectively highlight such cell assemblies by magnetic resonance imaging using signals from water protons that are associat...

    journal_title:Scientific reports

    pub_type: 杂志文章,评审

    doi:10.1038/s41598-019-41587-2

    authors: Watanabe T,Wang X,Tan Z,Frahm J

    更新日期:2019-03-25 00:00:00

  • Non-random distribution of homo-repeats: links with biological functions and human diseases.

    abstract::The biological function of multiple repetitions of single amino acids, or homo-repeats, is largely unknown, but their occurrence in proteins has been associated with more than 20 hereditary diseases. Analysing 122 bacterial and eukaryotic genomes, we observed that the number of proteins containing homo-repeats is sign...

    journal_title:Scientific reports

    pub_type: 杂志文章

    doi:10.1038/srep26941

    authors: Lobanov MY,Klus P,Sokolovsky IV,Tartaglia GG,Galzitskaya OV

    更新日期:2016-06-03 00:00:00