当前位置： SCI文献检索 > ARCHIVES OF VIROLOGY期刊下所有文献 > Characterization and complete genomic analysis of two Salmonella phages, SenALZ1 and SenASZ3, new members of the genus Cba120virus.

Characterization and complete genomic analysis of two Salmonella phages, SenALZ1 and SenASZ3, new members of the genus Cba120virus.

Abstract：

:Salmonella phages SenALZ1 and SenASZ3, two novel phages infecting Salmonella enterica, were isolated and analyzed. The genomes of these two phages consist of 154,811 and 157,630 base pairs (bp), with G+C contents of 44.56% and 44.74%, respectively. Fifty-nine of 199 open reading frames (ORFs) in the SenALZ1 genome, and 60 of the 204 in the SenASZ3 genome show similarity to reference sequences in the NCBI nr database that encode putative phage proteins with predicted functions. Based on the results of transmission electron microscopy (TEM) examination, complete genome sequence alignment, phylogenetic analysis, and gene annotation, we propose that these two phages are representative isolates of two new species of the genus Cba120virus, subfamily Cvivirinae, family Ackermannviridae.

journal_name

Arch Virol

journal_title

Archives of virology

authors

Chen L,Guan G,Liu Q,Yuan S,Yan T,Tian L,Zhou Y,Zhao Y,Ma Y,Wei T,Fu X

doi

10.1007/s00705-019-04183-3

subject

Has Abstract

pub_date

2019-05-01 00:00:00

pages

1475-1478

issue

5

eissn

0304-8608

issn

1432-8798

pii

10.1007/s00705-019-04183-3

journal_volume

164

pub_type

杂志文章

相关文献

ARCHIVES OF VIROLOGY文献大全
  • Retroviral properties inherent to viral erythrocytic infection in sea bass.

    abstract：:The characterization of the aetiological agent of viral erythrocytic infection (VEI) of sea bass suggests a retroviral origin of the disease. RNA from viral erythrocytic infection virus (VEIV) and DNA from blood and organs of VEI-affected fish hybridized to a specific retrovirus cDNA probe. Sequences homologous to ret...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01309960

    authors： Pintó RM,Ribes E,Jofre J,Bosch A

    更新日期：1995-01-01 00:00:00

  • Molecular epidemiology of TTV-like mini virus in Norway.

    abstract：:TT virus (TTV), the first human circovirus to be discovered, appears to be present in most people; less is known about the prevalence of the related TTV-like mini virus (TLMV). A sensitive nested PCR, specific for TLMV, detected the virus in 48% of 201 sera (Norwegian blood donors) previously found to have a 90% preva...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s705-002-8310-6

    authors： Moen EM,Huang L,Grinde B

    更新日期：2002-01-01 00:00:00

  • Intraepidemic variants of influenza virus H3 hemagglutinin differing in the number of carbohydrate side chains.

    abstract：:During the epidemic outbreak in the region of Greifswald in the winter 1974/75, we found influenza virus variants which showed differences in the electrophoretic mobility of HA. Among the 25 isolates 13 were of slower and 12 of higher mobility. HA1 of 6 isolates was studied by determining the number of the carbohydrat...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01310484

    authors： Seidel W,Künkel F,Geisler B,Garten W,Herrmann B,Döhner L,Klenk HD

    更新日期：1991-01-01 00:00:00

  • Inhibition of the PI3K/Akt pathway by Ly294002 does not prevent establishment of persistent Junín virus infection in Vero cells.

    abstract：:In previous work, we demonstrated that the arenavirus Junín virus (JUNV) is able to activate Akt by means of the phosphatidylinositol-3-kinase (PI3K) survival pathway during virus entry. This work extends our study, emphasizing the relevance of this pathway in the establishment and maintenance of persistent infection ...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-014-2298-6

    authors： Linero FN,Fernández Bell-Fano PM,Cuervo E,Castilla V,Scolaro LA

    更新日期：2015-02-01 00:00:00

  • Complete genome sequence of Brugmansia suaveolens mottle virus, a potyvirus from an ornamental shrub.

    abstract：:Brugmansia suaveolens mottle virus (BsMoV) was the first potyvirus isolated from "angel trumpet" (Brugmansia suaveolens), described in Brazil. In this study, the complete nucleotide (nt) genome sequence of BsMoV was determined, and the deduced amino acid (aa) sequence was analyzed. The BsMoV RNA genome consists of 987...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-010-0798-6

    authors： Lucinda N,Inoue-Nagata AK,Kitajima EW,Nagata T

    更新日期：2010-10-01 00:00:00

  • Electron microscopic studies on equine infectious anemia virus (EIAV). Brief report.

    abstract：:Morphological studies of EIAV reveal knobs on the surface of the particles, conically and tubularly shaped cores, budding particles with dense crescents directly underlying the plasma membrane, and distinct intracytoplasmic structures in infected cells. ...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01315055

    authors： Weiland F,Matheka HD,Coggins L,Hatner D

    更新日期：1977-01-01 00:00:00

  • Point mutations in helper component protease of clover yellow vein virus are associated with the attenuation of RNA-silencing suppression activity and symptom expression in broad bean.

    abstract：:Helper component protease (HC-Pro) is a potyvirus-encoded multifunctional protein and a major determinant of symptom expression in a susceptible plant. Here, we show the involvement of clover yellow vein virus (ClYVV) HC-Pro in necrotic symptom expression in broad bean (Vicia faba cv. Wase). In this host, lethal necro...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-007-1073-3

    authors： Yambao ML,Yagihashi H,Sekiguchi H,Sekiguchi T,Sasaki T,Sato M,Atsumi G,Tacahashi Y,Nakahara KS,Uyeda I

    更新日期：2008-01-01 00:00:00

  • Identification of host factors potentially involved in RTM-mediated resistance during potyvirus long distance movement.

    abstract：:The long distance movement of potyviruses is a poorly understood step of the viral cycle. Only factors inhibiting this process, referred to as "Restricted TEV Movement" (RTM), have been identified in Arabidopsis thaliana. On the virus side, the potyvirus coat protein (CP) displays determinants required for long-distan...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-017-3292-6

    authors： Sofer L,Cabanillas DG,Gayral M,Téplier R,Pouzoulet J,Ducousso M,Dufin L,Bréhélin C,Ziegler-Graff V,Brault V,Revers F

    更新日期：2017-07-01 00:00:00

  • Asian domains of four major genotypes of JC virus, Af2, B1-b, CY and SC.

    abstract：:JC virus (JCV) strains worldwide can be classified into various genotypes based on DNA sequence variations. To define the domains of the four major JCV genotypes in Asia, we collected urine samples at six unstudied sites: three in southeastern Asia, two in the central highlands and one in central Asia. DNA was extract...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s705-002-8299-4

    authors： Saruwatari L,Sugimoto C,Kitamura T,Ohno N,Sakai E,Shresta P,Hoa BK,Phi PT,An HP,Tuyet NT,Honjo T,Kobayashi N,Zheng HY,Takasaka T,Yogo Y

    更新日期：2002-01-01 00:00:00

  • Complete nucleotide sequences of attenuated and severe isolates of Leek yellow stripe virus from garlic in northern Japan: identification of three distinct virus types in garlic and leek world-wide.

    abstract：:We have determined the complete nucleotide sequence of three isolates (two severe and one attenuated) of the potyvirus Leek yellow stripe virus (LYSV), the main causal agent of the garlic mosaic disease that is prevalent in Aomori prefecture, northern Japan. They contained 10,296-10,297 nucleotides and encoded a deduc...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-004-0482-9

    authors： Takaki F,Sano T,Yamashita K,Fujita T,Ueda K,Kato T

    更新日期：2005-06-01 00:00:00

  • Complete genomic characterization of milk vetch dwarf virus isolates from cowpea and broad bean in Anhui province, China.

    abstract：:Cowpea and broad bean plants showing severe stunting and leaf rolling symptoms were observed in Hefei city, Anhui province, China, in 2014. Symptomatic plants from both species were shown to be infected with milk vetch dwarf virus (MDV) by PCR. The complete genomes of MDV isolates from cowpea and broad bean were seque...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-017-3348-7

    authors： Zhang C,Zheng H,Yan D,Han K,Song X,Liu Y,Zhang D,Chen J,Yan F

    更新日期：2017-08-01 00:00:00

  • The Ac124 protein is not essential for the propagation of Autographa californica multiple nucleopolyhedrovirus, but it is a viral pathogenicity factor.

    abstract：:orf124 (ac124) of AcMNPV is one of the highly conserved unique genes in group I lepidopteran nucleopolyhedroviruses. So far, its function remains unknown. In this study, infection with a virus expressing an ac124-gfp fusion showed that Ac124 localized to the cytoplasm throughout the infection. In addition, an ac124 kn...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-014-2277-y

    authors： Liang C,Lan D,Zhao S,Liu L,Xue Y,Zhang Y,Wang Y,Chen X

    更新日期：2015-01-01 00:00:00

  • Detection of CMV-DNA in peripheral blood leukocytes of liver transplant patients after ganciclovir treatment.

    abstract：:Cytomegalovirus (CMV) infections are common after transplantation, but usually successfully treated with antivirals. In this study, the detection of CMV-DNA in peripheral blood leukocytes was monitored and compared with CMVpp65-antigenemia in liver transplant patients receiving ganciclovir treatment. Twenty adult live...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-003-0108-7

    authors： Loginov R,Höckerstedt K,Lautenschlager I

    更新日期：2003-07-01 00:00:00

  • Genetic structure and molecular variability of potato virus M populations.

    abstract：:To investigate the genetic diversity of potato virus M (PVM; genus Carlavirus, family Betaflexiviridae), the complete nucleotide sequence of the coat protein gene of 30 PVM isolates from a major potato-growing region in Iran were determined. Phylogenetic analysis of these Iranian PVM isolates together with those avail...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-014-2037-z

    authors： Tabasinejad F,Jafarpour B,Zakiaghl M,Siampour M,Rouhani H,Mehrvar M

    更新日期：2014-08-01 00:00:00

  • A clinical isolate of dengue virus and its proteins induce apoptosis in HMEC-1 cells: a possible implication in pathogenesis.

    abstract：:Cumulative studies have demonstrated that dengue virus infection results in the induction of apoptosis of certain cells in vitro. Moreover, apoptosis of microvascular endothelial cells in the brain and in the intestinal serosa has been demonstrated postmortem in dengue virus (DENV)-infected patients. In this work, hum...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-009-0396-7

    authors： Vásquez Ochoa M,García Cordero J,Gutiérrez Castañeda B,Santos Argumedo L,Villegas Sepúlveda N,Cedillo Barrón L

    更新日期：2009-01-01 00:00:00

  • Genome sequence of bubaline alphaherpesvirus 1 (BuHV1) isolated in Australia in 1972.

    abstract：:Bubaline alphaherpesvirus 1 (BuHV1) is a member of the family Herpesviridae, subfamily Alphaherpesvirinae, genus Varicellovirus. To date, no full genome sequence of BuHV has been published. Here, we report the complete genome sequence of bubaline alphaherpesvirus 1 (BuHV1) strain b6 (BuHV1-b6), isolated from a water b...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-016-3218-8

    authors： Scheffer CM,Varela AP,Cibulski SP,Schmidt C,Campos FS,Paim WP,Dos Santos RN,Teixeira TF,Loiko MR,Tochetto C,Dos Santos HF,de Lima DA,Cerva C,Mayer FQ,Petzhold SA,Franco AC,George TS,Spilki FR,Roehe PM

    更新日期：2017-05-01 00:00:00

  • Prevalence and genetic diversity of noroviruses in adults with acute gastroenteritis in Huzhou, China, 2013-2014.

    abstract：:Norovirus (NoV) infection is the most common cause of nonbacterial acute gastroenteritis, which affects both adults and children. However, the molecular epidemiology of NoV in adults with acute gastroenteritis in China has not been investigated extensively. In this study, we investigated the occurrence of NoV infectio...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-015-2440-0

    authors： Wu X,Han J,Chen L,Xu D,Shen Y,Zha Y,Zhu X,Ji L

    更新日期：2015-07-01 00:00:00

  • Molecular characterization of yam virus X, a new potexvirus infecting yams (Dioscorea spp) and evidence for the existence of at least three distinct potexviruses infecting yams.

    abstract：:The genome of yam virus X (YVX), a new member of the genus Potexvirus from yam (Dioscorea trifida), was completely sequenced. Structural and phylogenetic analysis showed that the closest relative of YVX is nerine virus X. A prevalence study found YVX only in plants maintained in Guadeloupe and showed that it also infe...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-014-2211-3

    authors： Mambole IA,Bonheur L,Dumas LS,Filloux D,Gomez RM,Faure C,Lange D,Anzala F,Pavis C,Marais A,Roumagnac P,Candresse T,Teycheney PY

    更新日期：2014-12-01 00:00:00

  • Complete nucleotide sequences and genome characterization of double-stranded RNA 1 and RNA 2 in the Raphanus sativus-root cv. Yidianhong [corrected].

    abstract：:Four distinct double-stranded (ds) RNA bands were extracted from leaves of Raphanus sativus-root cv. Yidianhong [corrected] with yellowing at the leaf edge in China. Purified viral particles of 28-30 nm in diameter contained dsRNA segments with the same number and mobility as these extracted directly from radish leave...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-005-0685-8

    authors： Chen L,Chen JS,Liu L,Yu X,Yu S,Fu TZ,Liu WH

    更新日期：2006-05-01 00:00:00

  • Sequence variation in two genes determines the efficacy of transmission of citrus tristeza virus by the brown citrus aphid.

    abstract：:Vector transmission is an important part of the viral infection cycle, yet for many viruses little is known about this process, or how viral sequence variation affects transmission efficacy. Here we examined the effect of substituting genes from the highly transmissible FS577 isolate of citrus tristeza virus (CTV) in ...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-016-3070-x

    authors： Harper SJ,Killiny N,Tatineni S,Gowda S,Cowell SJ,Shilts T,Dawson WO

    更新日期：2016-12-01 00:00:00

  • Using RRT-PCR analysis and virus isolation to determine the prevalence of avian influenza virus infections in ducks at Minto Flats State Game Refuge, Alaska, during August 2005.

    abstract：:This study describes surveillance for avian influenza viruses (AIV) in the Minto Flats State Game Refuge, high-density waterfowl breeding grounds in Alaska. Five hundred paired cloacal samples from dabbling ducks (Northern Pintail, Mallard, Green Wing Teal, and Widgeon) were placed into ethanol and viral transport med...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-007-0994-1

    authors： Runstadler JA,Happ GM,Slemons RD,Sheng ZM,Gundlach N,Petrula M,Senne D,Nolting J,Evers DL,Modrell A,Huson H,Hills S,Rothe T,Marr T,Taubenberger JK

    更新日期：2007-01-01 00:00:00

  • Nucleotide sequencing of a part of the 5'-noncoding region of echovirus type 9 and rapid virus detection during the acute phase of aseptic meningitis.

    abstract：:A part of the 5'-noncoding region of echovirus type 9 isolates was sequenced, and an attempt was made for rapid virus detection in clinical samples obtained from 22 subjects hospitalized with aseptic meningitis. The sequence identity of 440-bp products amplified from the region by RT-PCR was 87.7% between the standard...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s007050050124

    authors： Kim GR,Lee JS,Jung YT,Chung YJ,Rhyu MG

    更新日期：1997-01-01 00:00:00

  • An attenuation mechanism of Newcastle disease vaccine strain TCND.

    abstract：:To provide information on the mechanism of attenuation of a Newcastle disease vaccine strain, TCND, we compared it with the parental virulent strain California 11,914 (CAL) biologically and genetically. It was found that TCND bore the fusion protein of virulent type, consisting of a pair of dibasic amino acid residues...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s007050050361

    authors： Takakuwa H,Ito T,Takada A,Okazaki K,Kida H

    更新日期：1998-01-01 00:00:00

  • Immunogenicity of non-structural proteins of foot-and-mouth disease virus: differences between infected and vaccinated swine.

    abstract：:Non-structural as well as VP1 recombinant proteins of foot-and-mouth disease virus (FMDV) produced in E. coli, have been used to study the specific antibody response of infected or vaccinated swine. An analysis of sera from infected pigs, using a direct ELISA, showed that polypeptide 3ABC (spanning non-structural prot...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01538822

    authors： Rodríguez A,Dopazo J,Sáiz JC,Sobrino F

    更新日期：1994-01-01 00:00:00

  • Molecular prevalence of bovine noroviruses and neboviruses in newborn calves in Iran.

    abstract：:In this study, bovine enteric caliciviruses (BECs) were detected in 49.4% of a total of 253 stool specimens for diarrheic calves collected from 42 industrial dairy farms from March 2010 to February 2012. Genogroup III norovirus (NoVsGIII) were more prevalent (39.5%) than neboviruses (NBs) (15%), and coinfections were ...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-018-3716-y

    authors： Pourasgari F,Kaplon J,Sanchooli A,Fremy C,Karimi-Naghlani S,Otarod V,Ambert-Balay K,Mojgani N,Pothier P

    更新日期：2018-05-01 00:00:00

  • The complete nucleotide sequence of turnip mosaic virus RNA Japanese strain.

    abstract：:The complete nucleotide sequence of the RNA genome of turnip mosaic virus Japanese strain (TuMV-J) has been determined from five overlapping cDNA clones and by direct sequencing of viral RNA. The RNA sequence was 9833 nucleotides in length, excluding a 3' terminal poly(A) tail. An AUG triplet at position 130-132 was a...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01718209

    authors： Ohshima K,Tanaka M,Sako N

    更新日期：1996-01-01 00:00:00

  • The major internal protein, p27, of a retrovirus-like particle is expressed in blood lymphocytes from psoriatic patients.

    abstract：:Retrovirus-like particles were isolated from the urine of a patient with psoriasis. The major internal protein, p27, in these particles was isolated by immunosorbent chromatography and gel filtration on a Sephacryl S-300 column in 6 M guanidine hydrochloride. The protein was purified to homogeneity as judged by SDS-PA...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01314231

    authors： Iversen OJ,Dalen AB

    更新日期：1985-01-01 00:00:00

  • Analysis of the nucleotide sequence of five genes at the left end of the unique short region of the equine herpesvirus 4 genome.

    abstract：:Eco RI fragment G of equine herpesvirus 4 strain 405/76 (EHV 4.405/76) is located at the left end of the unique short region close to or extending into the internal repeat region of the prototypic arrangement of the genome. The nucleotide sequence of two subclones designated HS and G 19, contiguous within Eco RI fragm...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01309795

    authors： Nagesha HS,Crabb BS,Studdert MJ

    更新日期：1993-01-01 00:00:00

  • Next-generation sequencing of a human-animal reassortant G6P[14] rotavirus A strain from a child hospitalized with diarrhoea.

    abstract：:We previously reported the VP4 and the VP7 genotypes of the first G6P[14] rotavirus strain (RVA/Human-wt/GHA/M0084/2010/G6P[14]) from the stool of an infant with diarrhoea in Ghana. In the current study, we obtained the complete genome sequences using Illumina MiSeq next-generation sequencing to enable us to determine...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/s00705-020-04543-4

    authors： Damanka SA,Dennis FE,Lartey BL,Nyarko KM,Agbemabiese CA,Armah GE

    更新日期：2020-04-01 00:00:00

  • Kinetic haemagglutination inhibition technique as a means of detecting antigenic variations among strains of Nigerian flaviviruses.

    abstract：:Seven isolates of West Nile virus and an additional isolate tentatively identified at the outset as West Nile virus, were compared by Casals' modified haemagglutination inhibition technique. Two of the isolates were nearly identical; a second set of five isolates cross-reacted among themselves within a wide range and ...

    journal_title：Archives of virology

    pub_type： 杂志文章

    doi：10.1007/BF01315279

    authors： Odelola HA,Fabiyi A

    更新日期：1978-01-01 00:00:00