Global substitution of hemeproteins with noncanonical amino acids in Escherichia coli with intact cofactor maturation machinery.

Abstract:

:Global substitution of canonical amino acids (cAAs) with noncanonical (ncAAs) counterparts in proteins whose function is dependent on post-translational events such as cofactor binding is still a methodically challenging and difficult task as ncAA insertion generally interferes with the cofactor biosynthesis machinery. Here, we report a technology for the expression of fully substituted and functionally active cofactor-containing hemeproteins. The maturation process which yields an intact cofactor is timely separated from cAA→ncAA substitutions. This is achieved by an optimised expression and fermentation procedure which includes pre-induction of the heme cofactor biosynthesis followed by an incorporation experiment at multiple positions in the protein sequence. This simple strategy can be potentially applied for engineering of other cofactor-containing enzymes.

journal_name

Enzyme Microb Technol

authors

Völler JS,Thi To TM,Biava H,Koksch B,Budisa N

doi

10.1016/j.enzmictec.2017.06.014

subject

Has Abstract

pub_date

2017-11-01 00:00:00

pages

55-59

eissn

0141-0229

issn

1879-0909

pii

S0141-0229(17)30124-2

journal_volume

106

pub_type

杂志文章
  • A new esterase for the cleavage of pivalic acid-containing prodrug esters of cephalosporins.

    abstract::An extracellular esterase from the actinomycetes Amycolatopsis orientalis was found by screening. It is capable of splitting the isomeric mixture (K/J) of (I, Scheme 1) into 7-amino-3-methoxymethyl-3-cephem-4-carboxylic acid, pivalic acid, and acetaldehyde with a high yield. The purified enzyme of 55.4 Kd by SDS-PAGE ...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/0141-0229(95)00171-9

    authors: Sauber K,Aretz W,Meiwes J,Wollmann T

    更新日期:1996-07-01 00:00:00

  • Oxygen derepresses deacetoxycephalosporin C synthase and increases the conversion of penicillin N to cephamycin C in Streptomyces clavuligerus.

    abstract::When dissolved oxygen (DO) was maintained at saturation level during batch fermentations of Streptomyces clavuligerus (NRRL 3585), the accumulation of the intermediate penicillin N was lowered while formation of the end product cephamycin C was increased relative to fermentations without DO control. The specific activ...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/0141-0229(90)90178-s

    authors: Rollins MJ,Jensen SE,Wolfe S,Westlake DW

    更新日期:1990-01-01 00:00:00

  • Simultaneous production of cellulase and reducing sugar through modification of compositional and structural characteristic of sugarcane bagasse.

    abstract::This study examined the potential of untreated and alkali-pretreated sugarcane bagasse (SCB) in cellulase, reducing sugar (RS) and fungal biomass production via solid state fermentation (SSF) using Pycnoporus sanguineus. The impact of the composition, structure and cellulase adsorption ability of SCB on the production...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2013.05.005

    authors: Yoon LW,Ngoh GC,Chua AS

    更新日期:2013-09-10 00:00:00

  • Improved efficiency of a novel methyl parathion hydrolase using consensus approach.

    abstract::A methyl parathion hydrolase (MPH) gene, bjmpd, was cloned from a newly isolated MP-degrading bacterial strain, Burkholderia jiangsuensis MP-1T and heterologously expressed in Escherichia coli BL21 (DE3). Although the amino acid sequence of the bjmpd-encoded enzyme, named BjMPH, differed from that of MPH from Pseudomo...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2016.07.005

    authors: Liu XY,Chen FF,Li CX,Luo XJ,Chen Q,Bai YP,Xu JH

    更新日期:2016-11-01 00:00:00

  • Biochemical stability and molecular dynamic characterization of Aspergillus fumigatus cystathionine γ-lyase in response to various reaction effectors.

    abstract::Cystathionine γ-lyase (CGL) is a key enzyme in the methionine-cysteine cycle in all living organisms forming cysteine, α-ketobutyrate and ammonia via homocysteine and cystathionine intermediates. Although, human and plant CGLs have been extensively studied at the molecular and mechanistic levels, there has been little...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2015.08.004

    authors: El-Sayed AS,Abdel-Azeim S,Ibrahim HM,Yassin MA,Abdel-Ghany SE,Esener S,Ali GS

    更新日期:2015-12-01 00:00:00

  • A novel method for simultaneous purification and immobilization of a xylanase-lichenase chimera via SpyTag/SpyCatcher spontaneous reaction.

    abstract::We generated a bifunctional enzyme chimera containing the xylanase and lichenase coupled with SpyTag between them. Meanwhile, we generated another chimera containing SpyCatcher and elastin-like polypeptides (ELPs). As ELPs could bond to the xylanase-lichenase chimera through SpyTag/SpyCatcher spontaneous reaction in m...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2018.04.007

    authors: Lin Y,Jin W,Wang J,Cai Z,Wu S,Zhang G

    更新日期:2018-08-01 00:00:00

  • An alcohol oxidase of Phanerochaete chrysosporium with a distinct glycerol oxidase activity.

    abstract::An intracellular alcohol oxidase (AOX) was isolated from the white-rot basidiomycete Phanerochaete chrysosporium (Pch), grown on l-lactate induction medium, and purified to electrophoretic homogeneity. The dimeric protein consisted of two identical 75kDa subunits. The open reading frame of 1,956bp resulted in a monome...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2014.04.001

    authors: Linke D,Lehnert N,Nimtz M,Berger RG

    更新日期:2014-07-01 00:00:00

  • Secretory overexpression of the endoglucanase by Saccharomyces cerevisiae via CRISPR-δ-integration and multiple promoter shuffling.

    abstract::Various recombinant proteins can be produced by the yeast Saccharomyces cerevisiae cell factories; therefore, efficient recombinant protein production techniques are desirable. In this study, to establish an efficient recombinant protein production technique in S. cerevisiae, the secretory production of recombinant pr...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2018.10.014

    authors: Sasaki Y,Mitsui R,Yamada R,Ogino H

    更新日期:2019-02-01 00:00:00

  • Chemical modification of lysine residues in Bacillus alpha-amylases: effect on activity and stability.

    abstract::Chemical modification of lysine residues in two bacterial alpha-amylases, a mesophilic enzyme from Bacillus amyloliquefaciens (BAA) and a thermophilic enzyme from Bacillus licheniformis (BLA) was carried out using citraconic anhydride. 13 +/- 1 residues in BAA and 10 +/- 1 residues in BLA were found modified under def...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/s0141-0229(01)00296-4

    authors: Khajeh K,Naderi-Manesh H,Ranjbar B,Moosavi-Movahedi A,Nemat-Gorgani M

    更新日期:2001-04-05 00:00:00

  • Immobilization of lipases on hydrophobic supports involves the open form of the enzyme.

    abstract::The lipases from Thermomyces lanuginosus and Pseudomonas cepacia have been immobilized on octyl and cyanogen bromide (CNBr) agarose beads. The immobilization on octyl-agarose is slowed with increasing ionic strength, while the immobilization on CNBr is not significantly affected by the ionic strength. The inhibition o...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2015.02.001

    authors: Manoel EA,Dos Santos JC,Freire DM,Rueda N,Fernandez-Lafuente R

    更新日期:2015-04-01 00:00:00

  • Purification and characterization of an extracellular alpha-amylase produced by Lactobacillus manihotivorans LMG 18010(T), an amylolytic lactic acid bacterium.

    abstract::This work presents the purification and characterization of an extracellular alpha-amylase (1,4-alpha-D-glucan glucanohydrolase, EC 3.2.1.1) produced by a new lactic acid bacterium: Lactobacillus manihotivorans able to produce L(+) lactic acid from starch. The molecular weight was found to be 135 kDa. The temperature ...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/s0141-0229(00)00230-1

    authors: Aguilar G,Morlon-Guyot J,Trejo-Aguilar B,Guyot JP

    更新日期:2000-09-01 00:00:00

  • Effect of intercalating dyes on the production of antibiotics by Micromonospora rosaria and Micromonospora purpurea.

    abstract::The effect of treatment with various intercalating dyes on the ability to produce antibiotics in Micromonospora rosaria and Micromonospora purpurea was studied. Treatment with acriflavine resulted in a high frequency loss of antibiotic productivity in both species. In M. rosaria, the loss of antibiotic-producing abili...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/0141-0229(90)90128-d

    authors: Kim KS,Pai HS,Lee SY,Ryu DD

    更新日期:1990-08-01 00:00:00

  • Promotion of maltose fermentation at extremely low temperatures using a cryotolerant Saccharomyces cerevisiae strain immobilized on porous cellulosic material.

    abstract::Advantages in maltose fermentation at extremely low temperatures (5-10°C) using an alcohol resistant and cryotolerant yeast strain (Saccharomyces cerevisiae AXAZ-1) immobilized on porous cellulosic material (or tubular cellulose, TC), produced by delignification of wood sawdust, are reported. Pure maltose and glucose ...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2014.08.007

    authors: Ganatsios V,Koutinas AA,Bekatorou A,Kanellaki M,Nigam P

    更新日期:2014-11-01 00:00:00

  • Flow cytometric immunoassay using E. coli with autodisplayed Z-domains.

    abstract::Recently, we reported a highly sensitive immunoassay using Escherichia coli cells with autodisplayed Z-domains. In this work, E. coli cells with autodisplayed Z-domains were applied to the flow-cytometry-based simultaneous detection of multiple analytes. The E. coli cells were doubly transfected to express a fluoresce...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2013.03.018

    authors: Park M,Bong JH,Yoo G,Jose J,Kang MJ,Pyun JC

    更新日期:2013-08-15 00:00:00

  • Engineering and optimization of phosphate-responsive phytase expression in Pichia pastoris yeast for phytate hydrolysis.

    abstract::Phytate is the major storage form of phosphorus in plants. It is present in cereals and raw materials of vegetable origin used in animal and human diets. However, non-ruminant animals have little phytase activity in their guts and, therefore, cannot digest phytate. As a result, almost all dietary phytate is discharged...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2020.109533

    authors: Xie Z,Fong WP,Tsang PW

    更新日期:2020-06-01 00:00:00

  • Multi-functional glycoside hydrolase: Blon_0625 from Bifidobacterium longum subsp. infantis ATCC 15697.

    abstract::We here describe a unique β-D-glucosidase (BGL; Blon_0625) derived from Bifidobacterium longum subsp. infantis ATCC 15697. The Blon_0625 gene was expressed by recombinant Escherichia coli. Purified recombinant Blon_0625 retains hydrolyzing activity against both p-nitrophenyl-β-D-glucopyranoside (pNPG; 17.3±0.24Umg(-1)...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2014.10.001

    authors: Matsumoto T,Shimada S,Hata Y,Tanaka T,Kondo A

    更新日期:2015-01-01 00:00:00

  • Characterization and solvent engineering of wheat β-amylase for enhancing its activity and stability.

    abstract::The kinetic and thermodynamic parameters of wheat β-amylase (WBA) were characterized and various additives were evaluated for enhancing its activity and thermostability. WBA activity was examined by neocuproine method using soluble starch as substrate. The Michaelis constant (K(m)) and molecular activity (k(cat)) were...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2012.07.004

    authors: Daba T,Kojima K,Inouye K

    更新日期:2012-10-10 00:00:00

  • The influence of hexoses addition on the fermentation of d-xylose in Debaryomyces hansenii under continuous cultivation.

    abstract::The effect of hexoses (glucose and galactose) addition to the feed xylose mineral medium of Debaryomyces hansenii chemostat cultures grown at a constant dilution rate of 0.055 h(-1) was studied. Xylitol was the major product detected amongst all tested conditions. The maximal values for xylitol yield and volumetric pr...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/s0141-0229(00)00166-6

    authors: Tavares JM,Duarte LC,Amaral-Collaço MT,Gírio FM

    更新日期:2000-06-01 00:00:00

  • Optimization of the growth conditions of Sf21 insect cells for high-density perfusion culture in stirred-tank bioreactors.

    abstract::Spodoptera frugiperda insect cells (IPLB-Sf21-AE) (Sf21), infected with baculovirus expression vectors during their exponential growth phase, are commonly used to produce a variety of heterologous recombinant proteins. In the present study the culture conditions of these insect cells were studied to establish high-den...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/0141-0229(94)90022-1

    authors: Deutschmann SM,Jäger V

    更新日期:1994-06-01 00:00:00

  • Operational stabilities of different chemical derivatives of Novozym 435 in an alcoholysis reaction.

    abstract::Industrial use of Novozym 435 in synthesis of structured lipids and biodiesel via alcoholysis is limited by mass transfer effects of the glycerides through immobilized enzymes and its low operational stability under operation conditions. To better understand this, differently modified Novozym 435 preparations, differi...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2016.04.007

    authors: Villalba M,Verdasco-Martín CM,Dos Santos JC,Fernandez-Lafuente R,Otero C

    更新日期:2016-08-01 00:00:00

  • Penicillin amidase-catalysed transfer of low specific acyl moiety. Synthesis of 7-benzoxazolonylacetamido desacetoxycephalosporanic acid.

    abstract::The methyl ester of 2-benzoxazolon-3-yl-acetic acid was used as an acyl donor in the penicillin amidase-catalysed transfer reaction to 7-aminodesacetoxycephalosporanic acid. The synthesis of 7-(2-benzoxazolon-3-yl-acetamido)-desacetoxycephalosporanic acid was carried out as a kinetically controlled reaction. A charact...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/0141-0229(92)90144-d

    authors: Stambolieva N,Mincheva Z,Galunsky B,Kalcheva V

    更新日期:1992-06-01 00:00:00

  • Comparative performance of S-adenosyl-L-methionine biosynthesis and degradation in Pichia pastoris using different promoters and novel consumption inhibitors.

    abstract::The yeast Pichia pastoris is a widely used host for recombinant protein expression, and has recently been engineered for whole-cell biocatalysis. The inducible P(AOX) and constitutive P(GAP) promoters are commonly employed. In this study, the S-adenosyl-L-methionine (SAM) biosynthesis and degradation efficiency of two...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2013.09.003

    authors: Hu X,Chu J,Zhang S,Zhuang Y

    更新日期:2014-02-05 00:00:00

  • Studies on the purification of peroxidase from horseradish roots using reverse micelles.

    abstract::Horseradish peroxidase (HRP) was successfully purified from horseradish roots by a two-stage reverse-micellar extraction from the dialyzed aqueous extract. The anionic surfactant AOT dissolved in isooctane was used to produce the reverse-micellar phases. The narrow pH range at which HRP solubilization occurred was exp...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/0141-0229(95)00031-3

    authors: Regalado C,Asenjo JA,Pyle DL

    更新日期:1996-04-01 00:00:00

  • Characterization of a novel amylosucrase gene from the metagenome of a thermal aquatic habitat, and its use in turanose production from sucrose biomass.

    abstract::Turanose is a natural isomer of sucrose. It is an emerging functional sweetener of the next generation. Turanose is catalytically synthesized from the sucrose biomass by employing amylosucrase enzyme. In this study, a novel gene encoding amylosucrase (Asmet) has been identified from the metagenome of a thermal aquatic...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2019.109372

    authors: Agarwal N,Narnoliya LK,Singh SP

    更新日期:2019-12-01 00:00:00

  • Production of d-glucuronic acid from myo-inositol using Escherichia coli whole-cell biocatalyst overexpressing a novel myo-inositol oxygenase from Thermothelomyces thermophile.

    abstract::D-glucuronic acid (GlcUA) is an important intermediate with numerous applications in the food, cosmetics, and pharmaceutical industries. Its biological production routes which employ myo-inositol oxygenase (MIOX) as the key enzyme are attractive. In this study, five diverse MIOX-encoding genes, from Cryptococcus neofo...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2019.04.013

    authors: Teng F,You R,Hu M,Liu W,Wang L,Tao Y

    更新日期:2019-08-01 00:00:00

  • Molecular insights into substrate specificity of Rhodococcus ruber CGMCC3090 by gene cloning and homology modeling.

    abstract::The primary aim of this study was to decipher the catalytic functions of the NHase with wide substrate spectra from Rhodococcus ruber CGMCC3090 by computer modeling and substrate docking. 3D structure model of the enzyme was built by computer modeling to obtain the optimal structure. The larger binding site cavity (55...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2012.11.004

    authors: Wang S,Dai Y,Wang J,Shen Y,Zhai Y,Zheng H,Wang M

    更新日期:2013-02-05 00:00:00

  • Biosynthesis of the fatty acid isopropyl esters by engineered Escherichia coli.

    abstract::The fatty acid methyl esters and fatty acid ethyl esters are known as biodiesels which are considered to be renewable, nontoxic and biodegradable biofuels. However, the conventional biodiesels show a high crystallization temperature which is one of the most critical obstacles against the widespread biodiesel usage. Th...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2017.03.012

    authors: Pan H,Zhang L,Li X,Guo D

    更新日期:2017-07-01 00:00:00

  • The development and application of a new affinity partitioning system for enzyme isolation and purification.

    abstract::A reactive water-soluble polymer was synthesized by copolymerizing N-isopropylacrylamide and glycidyl acrylate. The reactive polymer could react with the amino groups of enzymes/proteins or other ligands to form an affinity polymer. As a model, the reactive polymer was allowed to react with paraaminobenzamidine, a str...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/0141-0229(90)90005-b

    authors: Nguyen AL,Luong JH

    更新日期:1990-09-01 00:00:00

  • Enzymatic production of cephalexin.

    abstract::Enzymatic production of cephalexin using immobilized penicillin G acylase was studied. The factors that affect the conversion of 7-amino-3-deacetoxycephalosporanic acid (7-ADCA) to cephalexin, such as pH; temperature; concentrations of 7-ADCA, D(-)-phenylglycine methyl ester (PGME), and immobilized penicillin G acylas...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/0141-0229(94)90095-7

    authors: Maladkar NK

    更新日期:1994-08-01 00:00:00

  • Effects of gas periodic stimulation on key enzyme activity in gas double-dynamic solid state fermentation (GDD-SSF).

    abstract::The heat and mass transfer have been proved to be the important factors in air pressure pulsation for cellulase production. However, as process of enzyme secretion, the cellulase formation has not been studied in the view of microorganism metabolism and metabolic key enzyme activity under air pressure pulsation condit...

    journal_title:Enzyme and microbial technology

    pub_type: 杂志文章

    doi:10.1016/j.enzmictec.2013.12.015

    authors: Chen H,Shao M,Li H

    更新日期:2014-03-05 00:00:00