Systems biology of seeds: deciphering the molecular mechanisms of seed storage, dormancy and onset of germination.

Abstract:

:Seeds are heterogeneous storage reserves with wide array of storage compounds that include various soluble carbohydrates, starch polymer, storage proteins and lipids. These stored reserves comprise 70% of the world's caloric intake in the form of food and animal feed produced through sustainable agriculture, which contributes to food and nutritional security. Seed systems biology remains an enigmatic subject in understanding seed storage processes, maturation and pre-germinative metabolism. The reviews and research articles covered in this special issue of Plant Cell Reports highlight recent advances made in the area of seed biology that cover various systems biology applications such as gene regulatory networks, metabolomics, epigenetics and the role of micro-RNA in seed development.

journal_name

Plant Cell Rep

journal_title

Plant cell reports

authors

Sreenivasulu N

doi

10.1007/s00299-017-2135-y

subject

Has Abstract

pub_date

2017-05-01 00:00:00

pages

633-635

issue

5

eissn

0721-7714

issn

1432-203X

pii

10.1007/s00299-017-2135-y

journal_volume

36

pub_type

社论
  • Altered susceptibility to infection by Sinorhizobium meliloti and Nectria haematococca in alfalfa roots with altered cell cycle.

    abstract::Most infections of plant roots are initiated in the region of elongation; the mechanism for this tissue-specific localization pattern is unknown. In alfalfa expressing PsUGT1 antisense mRNA under the control of the cauliflower mosaic virus (CaMV) 35S promoter, the cell cycle in roots is completed in 48 h instead of 24...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-004-0787-x

    authors: Woo HH,Hirsch AM,Hawes MC

    更新日期:2004-07-01 00:00:00

  • Post-Golgi protein traffic in the plant secretory pathway.

    abstract::The Golgi apparatus in plants is organized as a multitude of individual stacks that are motile in the cytoplasm and in close association with the endoplasmic reticulum (ER) (Boevink et al. in Plant J 15:441-447, 1998). These stacks operate as a sorting centre for cargo molecules, providing modification and redirection...

    journal_title:Plant cell reports

    pub_type: 杂志文章,评审

    doi:10.1007/s00299-007-0390-z

    authors: Hanton SL,Matheson LA,Chatre L,Rossi M,Brandizzi F

    更新日期:2007-09-01 00:00:00

  • Comparative analysis of expressed sequence tags (ESTs) of ginseng leaf.

    abstract::The expressed sequence tags (ESTs) referenced in this report are the first transcriptomes in a leaf from a half-shade ginseng plant. A cDNA library was constructed from samples of the leaves of 4-year-old Panax ginseng plants, which were cultured in a field. The 2,896 P. ginseng cDNA clones represent 1,576 unique sequ...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-005-0095-0

    authors: Kim MK,Lee BS,In JG,Sun H,Yoon JH,Yang DC

    更新日期:2006-06-01 00:00:00

  • Expression profiles of precursor and mature microRNAs under dehydration and high salinity shock in Populus euphratica.

    abstract::MicroRNAs (miRNAs) are small non-coding RNAs that play vital roles in plant abiotic stress responses via cleavage or translational inhibition of their target mRNAs. Populus euphratica is a typical stress-resistant sessile organism that grows in desert areas. Here, we identified sequences of 12 miRNA precursors from 11...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-011-1096-9

    authors: Qin Y,Duan Z,Xia X,Yin W

    更新日期:2011-10-01 00:00:00

  • AtHSP17.8 overexpression in transgenic lettuce gives rise to dehydration and salt stress resistance phenotypes through modulation of ABA-mediated signaling.

    abstract:KEY MESSAGE:Transgenic Arabidopsis and lettuce plants overexpressing AtHSP17.8 showed ABA-hypersensitive but abiotic stress-resistant phenotypes. ABA treatment caused a dramatic induction of early ABA-responsive genes in AtHSP17.8 -overexpressing transgenic lettuce. Plant small heat shock proteins function as chaperone...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-013-1506-2

    authors: Kim DH,Xu ZY,Hwang I

    更新日期:2013-12-01 00:00:00

  • Localized endocytosis in tobacco pollen tubes: visualisation and dynamics of membrane retrieval by a fluorescent phospholipid.

    abstract::Two modes of endocytosis are known to occur in eucaryotic cells: fluid phase and receptor-mediated endocytosis. Fluid-phase endocytosis in plant cells resembles the retrieval of excess plasma membrane material previously incorporated by exocytosis. Pollen tubes need to carry out strong membrane retrieval due to their ...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-007-0437-1

    authors: Lisboa S,Scherer GE,Quader H

    更新日期:2008-01-01 00:00:00

  • In vitro adventitious shoot production inPaulownia.

    abstract::In vitro adventitious shoot formation was examined in petioles and laminae ofPaulownia elongata, P. fortunei, andP. 'Henan 1'. Fully expanded, dark green, thick, older leaves were healthier and exhibited greater callus and shoot production than did young leaves. The ten clones used varied greatly in adventitious shoot...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/BF01088288

    authors: Bergmann BA,Moon HK

    更新日期:1997-02-01 00:00:00

  • Introduction of a chimeric gene encoding an oryzacystatin-β-glucuronidase fusion protein into rice protoplasts and regeneration of transformed plants.

    abstract::In order to construct transgenic rice plant with an introduced oryzacystatin (OC)-β-glucuronidase (GUS) fusion gene, we first introduced it into rice protoplasts by electroporation, together with a marker gene conferring hygromycinresistance (pUC-HPH). In a transient assay using the transfected protoplasts, both OC an...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/BF00193714

    authors: Hosoyama H,Irie K,Abe K,Arai S

    更新日期:1995-12-01 00:00:00

  • Genome-wide characterization of the WRKY gene family in radish (Raphanus sativus L.) reveals its critical functions under different abiotic stresses.

    abstract:KEY MESSAGE:The radish WRKY gene family was genome-widely identified and played critical roles in response to multiple abiotic stresses. The WRKY is among the largest transcription factors (TFs) associated with multiple biological activities for plant survival, including control response mechanisms against abiotic stre...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-017-2190-4

    authors: Karanja BK,Fan L,Xu L,Wang Y,Zhu X,Tang M,Wang R,Zhang F,Muleke EM,Liu L

    更新日期:2017-11-01 00:00:00

  • Expression of human growth hormone in transgenic rice cell suspension culture.

    abstract::Human growth hormone (hGH), a pituitary-derived polypeptide, evidences a wide range of biological functions, including protein synthesis, cell proliferation, and metabolism. A synthetic hGH gene (shGH) has been synthesized on the basis of plant-optimized codon usage via an overlap PCR strategy and located in a plant e...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-008-0514-0

    authors: Kim TG,Baek MY,Lee EK,Kwon TH,Yang MS

    更新日期:2008-05-01 00:00:00

  • Production of fertile transgenic barley (Hordeum vulgare L.) plant using the hygromycin-resistance marker.

    abstract::Fertile transgenic barley (Hordeum vulgare L.) plants were obtained by high velocity particle bombardment. The plasmid pBCl was used to deliver the selectable hph gene and reporter Gus gene into immature embryo. After the selection culture 18 hygromycin resistant plants were obtained. Samples for Southern hybridizatio...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/BF00232038

    authors: Hagio T,Hirabayashi T,Machii H,Tomotsune H

    更新日期:1995-02-01 00:00:00

  • Development of a complete set of monosomic alien addition lines between Brassica napus and Isatis indigotica (Chinese woad).

    abstract:KEY MESSAGE:A complete set of monosomic alien addition lines of Brassica napus with one of the seven chromosomes of Isatis indigotica and the recombinant mitochondria was developed and characterized. Monosomic alien addition lines (MAALs) are valuable for elucidating the genome structure and transferring the useful gen...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-014-1621-8

    authors: Kang L,Du X,Zhou Y,Zhu B,Ge X,Li Z

    更新日期:2014-08-01 00:00:00

  • Can the world's favorite fruit, tomato, provide an effective biosynthetic chassis for high-value metabolites?

    abstract::Tomato has a relatively short growth cycle (fruit ready to pick within 65-85 days from planting) and a relatively high yield (the average for globe tomatoes is 3-9 kg fruit per plant rising to as much as 40 kg fruit per plant). Tomatoes also produce large amounts of important primary and secondary metabolites which ca...

    journal_title:Plant cell reports

    pub_type: 杂志文章,评审

    doi:10.1007/s00299-018-2283-8

    authors: Li Y,Wang H,Zhang Y,Martin C

    更新日期:2018-10-01 00:00:00

  • Micropropagation of mature Chinese tallow tree (Sapium sebiferum Roxb.).

    abstract::An in vitro propagation technique based on axillary bud proliferation has been developed for matureSapium sebiferum trees. Nodal segments cultured on Murashige and Skoog (MS) medium supplemented with benzyl adenine (1-10 μM and α-naphthaleneacetic acid (0-0.5 μM showed axillary bud proliferation. Shoots proliferated i...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/BF01275506

    authors: Siril EA,Dhar U

    更新日期:1997-06-01 00:00:00

  • Sudan-β-d-glucuronides and their use for the histochemical localization of β-glucuronidase activity in transgenic plants.

    abstract:: Synthesis of five different Sudan-β-D-glucuronides (I, II, III, IV, and RedB) was performed by condensation of a set of red Sudan diazo dyes with methyl (1-deoxy-2,3,4-tri-O-acetyl-1-trichloroacetimidoyl-α-D-glucopyran)uronate. After the acid and alcohol groups had been deprotected, the resulting compounds were used ...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s002990000219

    authors: Van der Eycken E,Terryn N,Goeman JL,Carlens G,Nerinckx W,Claeyssens M,Van der Eycken J,Van Montagu M,Brito-Arias M,Engler G

    更新日期:2000-10-01 00:00:00

  • The ornamental variety, Japanese striped corn, contains high anthocyanin levels and PAL specific activity: establishing the potential for development of an oral therapeutic.

    abstract::Phenylalanine ammonia-lyase [PAL, EC 4.3.1.24 (formerly EC 4.3.1.5)], functions in the plant phenylpropanoid biosynthetic pathway to deaminate the amino acid L-phenylalanine forming trans-cinnamic acid and ammonia. The human inherited metabolic disorder phenylketonuria (PKU) is characterized by an inability of individ...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-008-0650-6

    authors: McInnis S,Clemens S,Kermode AR

    更新日期:2009-03-01 00:00:00

  • Cytological and molecular characterization of a novel monogenic dominant GMS in Brassica napus L.

    abstract::A novel genic male sterile (GMS) line in Brassica napus L., which was identified in 1999, was found to be controlled by a monogenic dominant gene, which we have designated as MDGMS. The microspores of the MDGMS abort before the degradation of the tapetal cell layer. The F1 fertility from any fertile lines crossed with...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-006-0276-5

    authors: Wang DJ,Guo AG,Li DR,Tian JH,Huang F,Sun GL

    更新日期:2007-05-01 00:00:00

  • Ultrastructure and histochemical analysis of extracellular matrix surface network in kiwifruit endosperm-derived callus culture.

    abstract::The study used Actinidia deliciosa endosperm-derived callus to investigate aspects of the morphology, histology and chemistry of extracellular matrix (ECM) structures in morphogenically stable tissue from long-term culture. SEM showed ECM as a membranous layer or reticulated fibrillar and granular structure linking th...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-008-0534-9

    authors: Popielarska-Konieczna M,Kozieradzka-Kiszkurno M,Swierczyńska J,Góralski G,Slesak H,Bohdanowicz J

    更新日期:2008-07-01 00:00:00

  • The influence of pretreatment on cell stage progression and the time of DNA synthesis in barley ( Hordeum vulgare L) uninucleate microspores.

    abstract::The objective of this study was to correlate the time that DNA synthesis first occurs in haploid microspores of barley with cell cycle and plant morphological stages and to subsequently assess the influence of pretreatments on DNA synthesis at different stages of microspore development. Spikes with microspores in earl...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-003-0635-4

    authors: Shim YS,Kasha KJ

    更新日期:2003-07-01 00:00:00

  • Plant regeneration from protoplasts isolated from long-term cell cultures of wheat (Triticum aestivum L.).

    abstract::A friable and fast-growing type of callus was isolated from a long term shoot-competent cell culture of wheat. The suspension cultures established from this callus consisted of small, densely cytoplasmic cells which divided more rapidly but with a lower plant regeneration frequency than the original culture. A high yi...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/BF00231799

    authors: Chang YF,Wang WC,Warfield CY,Nguyen HT,Wong JR

    更新日期:1991-03-01 00:00:00

  • Propagation of fern (Nephrolepis) through tissue culture.

    abstract::Rapid clonal propagation in three stolon bearing species of Nephrolepis was achieved by tissue culture methods. Explants from young stolons were grown on B5 (Gamborg et al. 1968) medium supplemented with indolebutyric acid where they produced several leaf primordia. These leaf primordia were isolated and grown into en...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/BF00272634

    authors: Padhya MA,Mehta AR

    更新日期:1982-12-01 00:00:00

  • Effect of cytokinin on morphological changes of suspension cultured cells of the moss, Barbula unguiculata.

    abstract::Suspension cultured cells of the moss, Barbula unguiculata, grow actively in both light and dark culture. Light-grown cells contain chlorophyll and exhibit an undifferentiated callus form. When cells are transferred to a dark condition, they develop into protonemata. Protonemata formation in the dark can be inhibited ...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/BF00272039

    authors: Takio S

    更新日期:1989-03-01 00:00:00

  • Sugarcane white leaf phytoplasma in tissue culture: long-term maintenance, transmission, and oxytetracycline remission.

    abstract::Sugarcane white leaf (SCWL)-diseased sugarcane plants collected from Udornthani Province, in north-eastern Thailand, were the source for tissue culture experiments. Explants from axillary buds, meristem tips, and leaves grew optimally in Murashige-Skoog medium containing 0.5 mg/l alpha-naphthaleneacetic acid, 0.5 mg/l...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-004-0847-2

    authors: Wongkaew P,Fletcher J

    更新日期:2004-11-01 00:00:00

  • Increased formation of cinnamoyl putrescines by fedbatch fermentation of cell suspension cultures of Nicotiana tabacum.

    abstract::The tobacco cell line TX1 (Nicotiana tabacum) accumulates up to 10 mg cinnamoyl putrescines/g dry weight. This level was further increased under various growth limiting conditions. The negative effect of accumulated phosphate on the optimal expression of cinnamoyl putrescine biosynthesis was prevented by the fedbatch ...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/BF00270221

    authors: Schiel O,Jarchow-Redecker K,Piehl GW,Lehmann J,Berlin J

    更新日期:1984-02-01 00:00:00

  • Genotype- and promoter-induced variability in transient β-glucuronidase expression in pea protoplasts.

    abstract::Leaf mesophyll protoplasts isolated from pea (Pisum sativum L.) genotypes Century and PI244253 showed transient expression of β-glucuronidase (GUS) when electroporated with plasmid DNA containing various promoter-leader sequence constructs driving the GUS gene. The optimum conditions for transient expression were: usi...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/BF00232127

    authors: Hobbs SL,Jackson JA,Baliski DS,Delong CM,Mahon JD

    更新日期:1990-06-01 00:00:00

  • Physiological and transcriptomic responses of reproductive stage soybean to drought stress.

    abstract:KEY MESSAGE:The dynamic alterations of the physiological and molecular processes in reproductive stage soybean indicated the dramatic impact caused by drought. Drought is a major abiotic stress that limits soybean (Glycine max) production. Most prior studies were focused on either model species or crops that are at the...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-018-2332-3

    authors: Xu C,Xia C,Xia Z,Zhou X,Huang J,Huang Z,Liu Y,Jiang Y,Casteel S,Zhang C

    更新日期:2018-12-01 00:00:00

  • Bacillus thuringiensis protein production, signal transduction, and insect control in chemically inducible PR-1a/cry1Ab broccoli plants.

    abstract::In an effort to develop a chemically inducible system for insect management, we studied production of Cry1Ab Bacillus thuringiensis (Bt) protein and control of the diamondback moth (DBM), Plutella xylostella L., in inducer-treated and untreated tissues of a broccoli line transformed with a PR-1a/cry1Ab expression cass...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-005-0091-4

    authors: Cao J,Bates SL,Zhao JZ,Shelton AM,Earle ED

    更新日期:2006-06-01 00:00:00

  • Cryopreservation of in vitro-grown shoot tips of raspberry (Rubus idaeus L.) by encapsulation-vitrification and encapsulation-dehydration.

    abstract::The first efficient cryopreservation procedure for in vitro-grown shoot tips of raspberry (Rubus idaeus L.) has been developed based on encapsulation-vitrification (EnVi) and encapsulation-dehydration (EnDe). EnVi resulted in higher survival (85%) and regrowth (75%) of cryopreserved shoot tips than EnDe (65 and 50%, r...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-005-0936-x

    authors: Wang Q,Laamanen J,Uosukainen M,Valkonen JP

    更新日期:2005-07-01 00:00:00

  • Long-term optimized embryogenic cultures in durum wheat (Triticum durum Desf.).

    abstract::Five varieties of durum wheat: Appulo, Ofanto, Latino, Creso, and Castello (Triticum durum Desf.) adapted to the semi-arid mediterranean environment have been tested for their in vitro response. Compact, embryogenic, highly regenerable calli originated from primary callus derived through proliferation of the scutellum...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/BF00193145

    authors: Borrelli GM,Lupotto E,Locatelli F,Wittmer G

    更新日期:1991-09-01 00:00:00

  • SA and ROS are involved in methyl salicylate-induced programmed cell death in Arabidopsis thaliana.

    abstract::Programmed cell death (PCD) is a genetically encoded, active process that results in the death of individual cells, tissues, or whole organs, which plays an important role in the life cycles of plants and animals. Previous studies show that methyl salicylate (MeSA) is a defense signal molecular associated with systemi...

    journal_title:Plant cell reports

    pub_type: 杂志文章

    doi:10.1007/s00299-011-1031-0

    authors: Yun LJ,Chen WL

    更新日期:2011-07-01 00:00:00