Abstract:
:Coxsackievirus B3 (CV-B3) has frequently been associated with aseptic meningitis outbreaks in China. To identify sequence motifs related to aseptic meningitis and to construct an infectious clone, the genome sequence of 08TC170, a representative strain isolated from cerebrospinal fluid (CSF) samples from an outbreak in Shandong in 2008, was determined, and the coding regions for P1-P3 and VP1 were aligned. The first 21 and last 20 residues were "TTAAAACAGCCTGTGGGTTGT" and "ATTCTCCGCATTCGGTGCGG", respectively. The whole genome consisted of 7401 nucleotides, sharing 80.8 % identity with the prototype strain Nancy and low sequence similarity with members of clusters A-C. In contrast, 08TC170 showed high sequence similarity to members of cluster D. An especially high level of sequence identity (≥97.7 %) was found within a branch constituted by 08TC170 and four Chinese strains that clustered together in all of the P1-P3 phylogenic trees. In addition, 08TC170 also possessed a close relationship to the Hong Kong strain 26362/08 in VP1. Similarity plot analysis showed that 08TC170 was most similar to the Chinese CV-B3 strain SSM in P1 and the partial P2 coding region but to the CV-B5 or E-6 strain in 2C and following regions. A T277A mutation was found in 08TC170 and other strains isolated in 2008-2010, but not in strains isolated before 2008, which had high sequence similarity and formed the cluster A277. The results suggested that 08TC170 was the product of both intertypic recombination and point mutation, whose effects on viral neurovirulence will be investigated in a further study. The high homology between 08TC170 and other strains revealed their co-circulation in mainland China and Hong Kong and indicates that further surveillance is needed.
journal_name
Arch Viroljournal_title
Archives of virologyauthors
Zhang W,Lin X,Jiang P,Tao Z,Liu X,Ji F,Wang T,Wang S,Lv H,Xu A,Wang Hdoi
10.1007/s00705-016-2893-9subject
Has Abstractpub_date
2016-08-01 00:00:00pages
2335-42issue
8eissn
0304-8608issn
1432-8798pii
10.1007/s00705-016-2893-9journal_volume
161pub_type
杂志文章abstract::A potyvirus isolated from Pinellia ternata in China was characterised and shown to be related to Soybean mosaic virus (SMV). The virus was pathogenic on P. ternata and some soybean cultivars, whereas the local soybean SMV isolate HH5 did not infect P. ternata. Western blot experiments demonstrated a serological relati...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-003-0184-8
更新日期:2004-02-01 00:00:00
abstract::Styrian oil pumpkin seedlings (Cucurbita pepo L. subsp. pepo var. styriaca GREB: .) were treated for 48 h with 1 mM OTC (L-2-oxothiazolidine-4-carboxylic acid) in order to artificially increase cellular glutathione content. They were inoculated with zucchini yellow mosaic virus (ZYMV) 10 days later. The effects of OTC...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-006-0880-2
更新日期:2007-01-01 00:00:00
abstract::Mosquito-borne alphaviruses are widely distributed throughout the world, causing important human illnesses. Therefore, the development of methods to enable early diagnosis of infections by alphavirus is essential. We show here the development and evaluation of a quantitative real-time RT-PCR using genus-specific prime...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-016-3019-0
更新日期:2016-11-01 00:00:00
abstract::The vervet monkey rotavirus SA11, a prototype strain of group A rotaviruses, has been shown to possess VP7 serotype 3 specificity but its neutralization specificity with regard to the other outer capsid protein VP4 has not been elucidated. We thus determined its VP4 specificity by two-way cross-neutralization with gui...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s007050050371
更新日期:1998-01-01 00:00:00
abstract::In each infected patient, the population of hepatitis C virus is composed of quasispecies that differ in their nucleotide sequences. Among regions in hepatitis C virus genomes, nucleotide sequences of the hypervariable region have been shown to change quickly during the course of infection. It is not known, however, w...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01315417
更新日期:1995-01-01 00:00:00
abstract::Human metapneumovirus (hMPV) is an important respiratory pathogen in young children whose seasonal activity varies substantially from year to year among different populations. This study was conducted to investigate if there was a seasonal variation in the incidence of hMPV infection in young children and possible ass...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-012-1492-7
更新日期:2013-02-01 00:00:00
abstract::Site-directed mutagenesis was used to study the biological significance of three N-linked glycans (linked to Asn406, Asn448, and Asn463), situated in the CD4-binding region of gp120. Mutagenesis was carried out in a phage M13 system, and the mutated env genes were inserted into recombinant vaccinia virus (r-vaccinia v...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01310571
更新日期:1994-01-01 00:00:00
abstract::A total of 34 highly pathogenic porcine reproductive and respiratory syndrome virus (HP-PRRSV) strains isolated from Vietnam during 2013-2014 were sequenced and analyzed. A partial sequence of ORF1a corresponding to the nonstructural protein 2 (Nsp2) coding region and the full sequence of open reading frame 5 (ORF5) g...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-015-2699-1
更新日期:2016-03-01 00:00:00
abstract::We examined the pattern of the N gene-mediated systemic hypersensitive response (HR), which was induced by tobacco mosaic virus upon temperature shift, and analyzed the distribution of the coat protein and the virus-encoded 126 kDa replicase protein (126 K protein) by immunoblot analysis. In the middle- and lower-posi...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-004-0373-0
更新日期:2004-11-01 00:00:00
abstract::The nucleotide sequences of the entire F genes of two isolates of the pigeon PMV-1 (PPMV-1) variant of Newcastle disease virus (NDV) were determined using RTPCR. The deduced amino acid sequences of the F0 protein showed four differences between isolate 760/83 which had been passaged 4 times in chickens and gave an int...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01718322
更新日期:1996-01-01 00:00:00
abstract::Truncated proteins corresponding to the C-terminal half of VP1 of four vaccine strains and two field variants of foot-and-mouth disease virus (FMDV) were expressed in E. coli. The expressed proteins were affinity purified and their type specific reactivity was confirmed by immunoprecipitation with anti-virus antibodie...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s007050050698
更新日期:1999-01-01 00:00:00
abstract::The entry of enveloped viruses into host cells requires the fusion of viral and cell membranes. These membrane fusion reactions are mediated by virus-encoded glycoproteins. In the case of avian metapneumovirus (aMPV), the fusion (F) protein alone can mediate virus entry and induce syncytium formation in vitro. To inve...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-015-2524-x
更新日期:2015-10-01 00:00:00
abstract::The characterization of the aetiological agent of viral erythrocytic infection (VEI) of sea bass suggests a retroviral origin of the disease. RNA from viral erythrocytic infection virus (VEIV) and DNA from blood and organs of VEI-affected fish hybridized to a specific retrovirus cDNA probe. Sequences homologous to ret...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01309960
更新日期:1995-01-01 00:00:00
abstract::Two types of RNA-5-containing beet necrotic yellow vein virus (BNYVV) have been detected in the UK at different sites in Norfolk. On the basis of nucleotide (nt) sequence comparisons, one virus source (UK-MH) was clearly identified as P type BNYVV, a virus type that had previously only been detected in two widely sepa...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-006-0832-x
更新日期:2007-01-01 00:00:00
abstract::A novel iflavirus, tentatively named "Sogatella furcifera honeydew virus 1" (SFHV1), discovered through transcriptome sequencing analysis of white-backed planthoppers (Sogatella furcifera) collected in southern China, is described here. The full genome of SFHV1 is 10,837 nucleotides (nt) long, including the polyA tail...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-018-3817-7
更新日期:2018-07-01 00:00:00
abstract::Gangliosides from different cells were tested for their inhibiting activity on VSV attachment to CER cells and goose erythrocytes. This inhibiting activity was enhanced when gangliosides were inserted into liposomes, in particular if containing phosphatidylserine. ...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01310981
更新日期:1987-01-01 00:00:00
abstract::Among the tick-borne orbiviruses (genus Orbivirus, family Reoviridae), 36 serotypes are currently classified within a single virus species, Great Island virus. In this study, we report the first characterization of a tick-borne orbivirus isolated from the tick Ixodes turdus in Japan, which we identified as a new membe...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-015-2588-7
更新日期:2015-12-01 00:00:00
abstract::We previously isolated the monopartite begomovirus tomato leaf curl Java virus (ToLCJAV) and satellite DNAbeta02 from the same naturally infected tomato source in Indonesia. ToLCJAV induced mild leaf curl symptoms in Nicotiana benthamiana plants; DNAbeta02 encoded the betaC1 gene and produced severe leaf curl symptoms...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-007-0957-6
更新日期:2007-01-01 00:00:00
abstract::The objective of this study was to test the ability of bovine viral diarrhea virus (BVDV) to infect mice. Two mice each were either mock infected or inoculated with one of three BVDV strains by the intraperitoneal (IP) (n = 8) or intranasal (IN) (n = 8) route. All mice were euthanized at day 7 postinfection (p.i.). No...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-015-2412-4
更新日期:2015-06-01 00:00:00
abstract::RNA was extracted from 'Hugh Dickson' rose leaves displaying virus-like symptoms in Maryland, USA. Using high-throughput sequencing, we identified a new virus, tentatively named "rose virus R". This virus has a negative-sense, single-stranded RNA genome and exhibits genomic features of a rhabdovirus, including a genom...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-020-04927-6
更新日期:2021-01-04 00:00:00
abstract::Sugarcane streak mosaic virus (SCSMV), an economically important causal agent of mosaic disease of sugarcane, is a member of the newly created genus Poacevirus in the family Potyviridae. In this study, we report the molecular characterization of three new SCSMV isolates from China (YN-YZ211 and HN-YZ49) and Myanmar (M...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-016-2810-2
更新日期:2016-06-01 00:00:00
abstract::Retroviral gag proteins, as well as fragments minimally containing the capsid (CA) and nucleocapsid (NC) subunits of Gag, are able to spontaneously assemble into virus-like particles (VLPs). This occurs in mammalian and bacterial cells as well as in in vitro systems. In every circumstance, nucleic acids are incorporat...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-013-1873-6
更新日期:2014-04-01 00:00:00
abstract::A novel bisegmented double-stranded RNA virus was identified in the mycoparasitic and opportunistic fungus Hypomyces chrysospermus. The RNA1 genome segment comprises 1866 bp and encodes an RNA-dependent RNA polymerase (RdRp). The RNA2 segment comprises 1822 bp and encodes a capsid protein. Phylogenetic analysis of the...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-019-04359-x
更新日期:2019-10-01 00:00:00
abstract::In dengue virus infected Aedes albopictus cells, electron-dense particles, larger than single ribosomes, were arranged on the cytoplasmic sides of rough endoplasmic reticulum (RER) membranes. Mature virions 40--45 nm in diameter as well as vesiculotubular structures 50--120 nm in diameter appeared in enlarged cisterna...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01314902
更新日期:1979-01-01 00:00:00
abstract::The swine pathogen porcine circovirus type 2 (PCV2) causes significant economic damage worldwide. The PCV2 capsid (CP) residues 169-STIDYFQPNNKR-180 have been identified as a decoy epitope that diverts the host immune response away from protective epitopes. However, the decoy epitope may include important linear or co...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-020-04831-z
更新日期:2020-12-01 00:00:00
abstract::Complete nucleotide (nt) and deduced amino acid sequences of two onion yellow dwarf virus (OYDV) isolates showing mild and severe symptoms in onion but being unable to infect garlic were determined. The genomes consisted of 10,459 and 10,461 nt (without the 3' poly(A) tail) and were 92.2 % identical. Comparison of the...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-012-1597-z
更新日期:2013-06-01 00:00:00
abstract::Here, we present the complete genomic sequence of duck enteritis virus (DEV) strain SD, isolated in China in 2012. The virus was virulent in experimentally infected 2-month-old ducks. The DEV SD genome is 160,945 base pairs (bp) in length. The viral genome sequence, when compared to that of strain DEV CSC, which was i...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-020-04594-7
更新日期:2020-07-01 00:00:00
abstract::Human leukocyte antigen (HLA) alleles are associated with both the progression of chronic hepatitis C (CHC) and the sustained virological response (SVR) to antiviral therapy. HLA-A*02 is the most common HLA allele in people of European/Caucasian descent and the Chinese and Japanese population. Therefore, we investigat...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/s00705-015-2361-y
更新日期:2015-04-01 00:00:00
abstract::The mechanism of cell death induced by feline immunodeficiency virus (FIV) infection was investigated in an interleukin 2(IL-2)-dependent T-lymphoblastoid cell line (MYA-1). DNA extracted from FIV-infected MYA-1 cells showed a ladder of nucleosomal DNA, indicating that the cytopathic effect (CPE) observed in these cel...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01309772
更新日期:1994-01-01 00:00:00
abstract::Human papillomavirus (HPV) type 13 DNA was detected in focal epithelial hyperplasia lesions of the oral mucosa in seven half-caste mexicans. The lesions contained intracellular papillomavirus-like particles with a diameter of about 50 nm. DNA extracted from biopsies contained unintegrated HPV type 13 DNA genomes as re...
journal_title:Archives of virology
pub_type: 杂志文章
doi:10.1007/BF01313899
更新日期:1987-01-01 00:00:00