Abstract:
:Generation of periodic patterns is fundamental to the differentiation of multiple tissues during development. How such patterns form robustly is still unclear. The Drosophila eye comprises ∼750 units, whose crystalline order is set during differentiation of the eye imaginal disc: an activation wave sweeping across the disc is coupled to lateral inhibition, sequentially selecting pro-neural cells. Using mathematical modelling, here we show that this template-based lateral inhibition is highly sensitive to spatial variations in biochemical parameters and cell sizes. We reveal the basis of this sensitivity, and suggest that it can be overcome by assuming a short-range diffusible activator. Clonal experiments identify Scabrous, a previously implicated inhibitor, as the predicted activator. Our results reveal the mechanism by which periodic patterning in the fly eye is stabilized against spatial variations, highlighting how the need to maintain robustness shapes the design of patterning circuits.
journal_name
Nat Communjournal_title
Nature communicationsauthors
Gavish A,Shwartz A,Weizman A,Schejter E,Shilo BZ,Barkai Ndoi
10.1038/ncomms10461subject
Has Abstractpub_date
2016-02-15 00:00:00pages
10461issn
2041-1723pii
ncomms10461journal_volume
7pub_type
杂志文章abstract::Spontaneous molecular oscillations are ubiquitous in biology. But to our knowledge, periodic cell migratory patterns have not been observed. Here we report the highly regular, periodic migration of cells along rectilinear tracks generated inside three-dimensional matrices, with each excursion encompassing several cell...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms1711
更新日期:2012-03-06 00:00:00
abstract::Valosin-containing protein (VCP, also called p97) is an essential and highly conserved adenosine triphosphate-dependent chaperone implicated in a wide range of cellular processes in eukaryotes, and mild VCP mutations can cause severe neurodegenerative disease. Here we show that mammalian VCP is trimethylated on Lys315...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms2041
更新日期:2012-01-01 00:00:00
abstract::The gyrotropic rotation around the equilibrium position constitutes the fundamental excitation of magnetic vortices in nanostructures. The frequency of this mode varies with material and sample geometry, but is independent of the vortex handedness and its core direction. Here, we demonstrate that this degeneracy is li...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms7409
更新日期:2015-03-03 00:00:00
abstract::Tornadoes cause loss of life and damage to property each year in the United States and around the world. The largest impacts come from 'outbreaks' consisting of multiple tornadoes closely spaced in time. Here we find an upward trend in the annual mean number of tornadoes per US tornado outbreak for the period 1954-201...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms10668
更新日期:2016-02-29 00:00:00
abstract::Understanding the behaviour of thermally excited many-particle systems, composed of a single particle type having a well-defined shape and size, is important in condensed matter, notably protein crystallization. Here we observe and explain the origin of local chiral symmetry breaking in a surprisingly simple system of...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms1803
更新日期:2012-05-01 00:00:00
abstract::Histone H2AX and MDC1 are key DNA repair and DNA-damage signalling proteins. When DNA double-strand breaks (DSBs) occur, H2AX is phosphorylated and then recruits MDC1, which in turn serves as a docking platform to promote the localization of other factors, including 53BP1, to DSB sites. Here, by using CRISPR-Cas9 engi...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-019-12929-5
更新日期:2019-11-15 00:00:00
abstract::A new paradigm for cellulose depolymerization by fungi focuses on an oxidative mechanism involving cellobiose dehydrogenases (CDH) and copper-dependent lytic polysaccharide monooxygenases (LPMO); however, mechanistic studies have been hampered by the lack of structural information regarding CDH. CDH contains a haem-bi...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms8542
更新日期:2015-07-07 00:00:00
abstract::Bacterial contamination of biological channels, catheters or water resources is a major threat to public health, which can be amplified by the ability of bacteria to swim upstream. The mechanisms of this 'rheotaxis', the reorientation with respect to flow gradients, are still poorly understood. Here, we follow individ...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-019-11360-0
更新日期:2019-07-31 00:00:00
abstract::Rapid and, in many cases, unprecedented Arctic climate changes are having far-reaching impacts on natural and human systems. Despite state-of-the-art climate models capturing the rapid nature of Arctic climate change, termed Arctic amplification, they significantly disagree on its magnitude. Using a regional, process-...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-018-07061-9
更新日期:2018-11-27 00:00:00
abstract::Ferroelectric domain walls constitute a completely new class of sheet-like functional material. Moreover, since domain walls are generally writable, erasable and mobile, they could be useful in functionally agile devices: for example, creating and moving conducting walls could make or break electrical connections in n...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms15105
更新日期:2017-05-16 00:00:00
abstract::The hormone calcitonin (CT) is primarily known for its pharmacologic action as an inhibitor of bone resorption, yet CT-deficient mice display increased bone formation. These findings raised the question about the underlying cellular and molecular mechanism of CT action. Here we show that either ubiquitous or osteoclas...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms6215
更新日期:2014-10-21 00:00:00
abstract::The Dansgaard-Oeschger (DO) events, as observed in oxygen isotope ratios from the North Greenland Ice Core Project (NGRIP) record, are an outstanding example of past abrupt climate transitions. Their physical cause remains debated, and previous research indicated that they are not preceded by classical early-warning s...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-018-04881-7
更新日期:2018-07-02 00:00:00
abstract::In certain regions of the predominantly nitrogen limited ocean, microbes can become co-limited by phosphorus. Within such regions, a proportion of the dissolved organic phosphorus pool can be accessed by microbes employing a variety of alkaline phosphatase (APase) enzymes. In contrast to the PhoA family of APases that...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms15465
更新日期:2017-05-19 00:00:00
abstract::Chemotherapy remains a mainstay of cancer treatment but its use is often limited by the development of adverse reactions. Severe loss of body weight (cachexia) is a frequent cause of death in cancer patients and is exacerbated by chemotherapy. We show that genetic inactivation of vascular endothelial growth factor (VE...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms12528
更新日期:2016-08-19 00:00:00
abstract::The dynamic incorporation of histone variants influences chromatin structure and many biological processes. In Arabidopsis, the canonical variant H3.1 differs from H3.3 in four residues, one of which (H3.1Phe41) is unique and conserved in plants. However, its evolutionary significance remains unclear. Here, we show th...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-018-02976-9
更新日期:2018-02-12 00:00:00
abstract::Multi-drug strategies have been attempted to prolong the efficacy of existing antibiotics, but with limited success. Here we show that the evolution of multi-drug-resistant Escherichia coli can be manipulated in vitro by administering pairs of antibiotics and switching between them in ON/OFF manner. Using a multiplexe...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms15589
更新日期:2017-06-08 00:00:00
abstract::High-resolution structural information on RNA and its functionally important complexes with proteins is dramatically underrepresented compared with proteins but is urgently needed for understanding cellular processes at the molecular and atomic level. Here we present an EPR-based protocol to help solving large RNA and...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms4669
更新日期:2014-05-14 00:00:00
abstract::Nonsyndromic cleft lip with or without a cleft palate (NSCL/P) is among the most common human congenital birth defects and imposes a substantial physical and financial burden on affected individuals. Here, we conduct a case-control-based GWAS followed by two rounds of replication; we include six independent cohorts fr...
journal_title:Nature communications
pub_type: 杂志文章,meta分析
doi:10.1038/ncomms7414
更新日期:2015-03-16 00:00:00
abstract::The functional role of adult neurogenesis in the hippocampus remains the subject of intense speculation. One recent hypothesis is that adult-born neurons contribute to the endocrine and behavioural outputs of the stress response. Here we show a genetic model system to ablate neurogenesis by inducibly deleting Tbr2 gen...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms9373
更新日期:2015-09-29 00:00:00
abstract::Plasmodium vivax is the leading cause of human malaria in Asia and Latin America but is absent from most of central Africa due to the near fixation of a mutation that inhibits the expression of its receptor, the Duffy antigen, on human erythrocytes. The emergence of this protective allele is not understood because P. ...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms4346
更新日期:2014-01-01 00:00:00
abstract::Fire emissions generate air pollutants ozone (O3) and aerosols that influence the land carbon cycle. Surface O3 damages vegetation photosynthesis through stomatal uptake, while aerosols influence photosynthesis by increasing diffuse radiation. Here we combine several state-of-the-art models and multiple measurement da...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-018-07921-4
更新日期:2018-12-21 00:00:00
abstract::Turning graphene magnetic is a promising challenge to make it an active material for spintronics. Predictions state that graphene structures with specific shapes can spontaneously develop magnetism driven by Coulomb repulsion of π-electrons, but its experimental verification is demanding. Here, we report on the observ...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-018-08060-6
更新日期:2019-01-14 00:00:00
abstract::Insects have presented human society with some of its greatest development challenges by spreading diseases, consuming crops and damaging infrastructure. Despite the massive human and financial toll of invasive insects, cost estimates of their impacts remain sporadic, spatially incomplete and of questionable quality. ...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms12986
更新日期:2016-10-04 00:00:00
abstract::Over the last century the North Anatolian Fault Zone in Turkey has produced a remarkable sequence of large earthquakes. These events have now left an earthquake gap south of Istanbul and beneath the Marmara Sea, a gap that has not been filled for 250 years. Here we investigate the nature of the eastern end of this gap...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms2999
更新日期:2013-01-01 00:00:00
abstract::Plasmodium vivax poses unique challenges for malaria control and elimination, notably the potential for relapses to maintain transmission in the face of drug-based treatment and vector control strategies. We developed an individual-based mathematical model of P. vivax transmission calibrated to epidemiological data fr...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-018-05860-8
更新日期:2018-08-17 00:00:00
abstract::Properties of human brain tissue change across the lifespan. Here we model these changes in the living human brain by combining quantitative magnetic resonance imaging (MRI) measurements of R1 (1/T1) with diffusion MRI and tractography (N=102, ages 7-85). The amount of R1 change during development differs between whit...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms5932
更新日期:2014-09-17 00:00:00
abstract::Most cancer vaccines are unsuccessful in eliciting clinically relevant effects. Without using exogenous antigens and adoptive cells, we show a concept of utilizing biologically reprogrammed cytomembranes of the fused cells (FCs) derived from dendritic cells (DCs) and cancer cells as tumor vaccines. The fusion of immun...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-019-11157-1
更新日期:2019-07-19 00:00:00
abstract::The deployment of next-generation renewable biofuels can be enhanced by improving their compatibility with the current infrastructure for transportation, storage and utilization. Propane, the bulk component of liquid petroleum gas, is an appealing target as it already has a global market. In addition, it is a gas unde...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms5731
更新日期:2014-09-02 00:00:00
abstract::The bacterial type III secretion system, or injectisome, is a syringe shaped nanomachine essential for the virulence of many disease causing Gram-negative bacteria. At the core of the injectisome structure is the needle complex, a continuous channel formed by the highly oligomerized inner and outer membrane hollow rin...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/s41467-018-06298-8
更新日期:2018-09-21 00:00:00
abstract::The tumour suppressor CYLD is a deubiquitinase previously shown to inhibit NF-κB, MAP kinase and Wnt signalling. However, the tumour suppressing mechanisms of CYLD remain poorly understood. Here we show that loss of CYLD catalytic activity causes impaired DNA damage-induced p53 stabilization and activation in epitheli...
journal_title:Nature communications
pub_type: 杂志文章
doi:10.1038/ncomms12508
更新日期:2016-08-26 00:00:00